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The map label for this gene is nisX1 [H]

Identifier: 125623904

GI number: 125623904

Start: 1032228

End: 1032944

Strand: Direct

Name: nisX1 [H]

Synonym: llmg_1073

Alternate gene names: 125623904

Gene position: 1032228-1032944 (Clockwise)

Preceding gene: 125623903

Following gene: 125623908

Centisome position: 40.81

GC content: 40.31

Gene sequence:

>717_bases
ATGCATCGTCGTCCTTCAAAACAACAAGTGGAGAGAGAAATTCTCTCAGAGAAGATAAAAGCTGTCTTTCATGAGCATAA
GGGACGCTATGGTGCGGTTAGAATTACCAAGGTACTTCATAATACTGGTATTATGACCAACACGAAACGTGTTGGGAAAC
TGATGCACTTGATGGGACTTTATGCCAAGGGAAGCCGTTATAAATATAAACATTACAACAGAAAAGGAGCTTCGCTTTCA
AGACCCAATTTAATTAATCAGATCTTTAAAGCAACAGCTCCTAATAAAGTATGGCTGGGAGACATGACCTATATCCCTAC
CAAAGAAGGCACCTTATACTTAGCCGTGAATATCGACGTTTTTTCACGTAAGATTGTAGGCTGGTCAATGTCTTCACGGA
TGCAAGATAAACTGGTGAGGGATTGCTTCTTACAAGCTTGTGGGAAAGAACATCCTCAGCCTGGCTTGATTGTCCATACT
GATCAAGGGAGTCAATATACAAGCTCTCGTTATCAATCTACTCTTCGTCAAGTCGGTGCTCAATCTAGCATGAGTCGTAA
AGGAAATCCCTATGACAATGCATTGATGGAGTCTTTTTATAAGACGCTAAAGAGAGAGCTTATTAATGATGCTCATTTTG
AGACAAGAGCTGAGGCTACTCAAGAAATATGTCAAGGGCCATCTAAAAATGTTGGTTTTGGGTCATTGAAAATGTAG

Upstream 100 bases:

>100_bases
AGTAAAACGTTTTGAATTTCTCTTGAAACATCATGGGAAGATAAAAATTAAGCATGCAGTAAAAGTTCTTAAGGTTTCTC
GCTCAGGTTTCTATGAATAC

Downstream 100 bases:

>100_bases
GAAATGGGCCACCCAAATTGTTGGTTTTGGGCCCATCACTTTATTTACTTTTTGGGGTTTTGGTTTTCTTCTCACTATAG
TCTTTCATTCTATAAGATTT

Product: transposase for insertion sequence element IS904E (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLS
RPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT
DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNALMESFYKTLKRELINDAHFETRAEATQEICQGPSKNVGFGSLKM

Sequences:

>Translated_238_residues
MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLS
RPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT
DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNALMESFYKTLKRELINDAHFETRAEATQEICQGPSKNVGFGSLKM
>Mature_238_residues
MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLS
RPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT
DQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNALMESFYKTLKRELINDAHFETRAEATQEICQGPSKNVGFGSLKM

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=225, Percent_Identity=35.1111111111111, Blast_Score=127, Evalue=7e-30,
Organism=Escherichia coli, GI1788405, Length=214, Percent_Identity=42.9906542056075, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1787263, Length=214, Percent_Identity=42.9906542056075, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1786753, Length=214, Percent_Identity=42.9906542056075, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1786570, Length=214, Percent_Identity=42.9906542056075, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1786490, Length=214, Percent_Identity=42.9906542056075, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1789981, Length=211, Percent_Identity=36.0189573459716, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27175; Mature: 27175

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDV
HHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCEEECCCCCCEEEEEEEHHH
FSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHTDQGSQYTSSRYQSTLRQVGA
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCC
QSSMSRKGNPYDNALMESFYKTLKRELINDAHFETRAEATQEICQGPSKNVGFGSLKM
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDV
HHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCEEECCCCCCEEEEEEEHHH
FSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHTDQGSQYTSSRYQSTLRQVGA
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCC
QSSMSRKGNPYDNALMESFYKTLKRELINDAHFETRAEATQEICQGPSKNVGFGSLKM
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]