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The map label for this gene is ybdN [H]

Identifier: 125623883

GI number: 125623883

Start: 1015186

End: 1016259

Strand: Direct

Name: ybdN [H]

Synonym: llmg_1052

Alternate gene names: 125623883

Gene position: 1015186-1016259 (Clockwise)

Preceding gene: 125623881

Following gene: 125623884

Centisome position: 40.13

GC content: 36.78

Gene sequence:

>1074_bases
ATGGTGAAGGTTTATCAAAAAGAAAATGTTTACGAAGCTTTTAATCATAGATTAGATTATATTTGTAATTATTTTGACCA
TCTTATTATCTCTTTTTCTGGTGGTAAAGATTCAGGATTGATGTTGGAATTGGTTTATCTTTATTATAAAAGCCATAAAT
TGGTCGAAAAAGGAATAAAGGTTTCAGTTTTCTATTTGGATTATGAAGGAAATTATCAAGAAACCAAAGATTATATTCAT
CGTTCGATGGGAAAATATCCTGAGTTTGAATATTATCATATTTGTTTGCCTGTTTCGGCTTCTTGTGGAATTTCAATGTC
ACAATCGACTTGGTTACCTTGGGACCCAGACCATAAGGAATTGTGGTTGAATACTATTCCTAAAGGAGCCATTCATTTAG
AAAATCAAGATTTTTCATTTTTCAAAGTTGGAATGTCAGATTATGATTTTCAAAGTAAATTTTGTCAGTGGCTTCATAAT
GAAAAAGGGGCGACTAGAACGGCTGTTTTGGTTGGAATACGTGCCCAAGAAAGTTTGAATCGTTATAATGCGGTGACACG
AGATGAAACATTCTCACGATTTGGAACAACAAATTACAGTCATCGTATTAGTAAAGATGTCTTTAATTTCTACCCAATGT
ATGATTGGTTATTTGCAGATATTTGGCGAGCGAATGCTAAATTTGAGTTTGATTATAATCACCTCTATGACTTATATTAT
CAAGCGGGTGTGCCTTTTAAATCGATGCGAGTCGCTAACCCTTTCCATCAGTGTGGCGTTCATTCGCTTAAACTTTATCA
AGCTTTAGAACCTGAAACATGGGGGAAGTTGGTGGGACGAGTCAATGGGGCAAACTTTGCGGCCCTTTATGGAGGAACGC
AAGCGATGGGATATCGTGGAGCGGTCCTACCCAAAGGTCATACTTGGCAGTCTTACGTTGAATTTCTACTGGATACTTTG
CCGGAAGAAACCAGAAATGTATATCGTAAAAAGTTCCAATCATCAATGGACTATTGGATGAGAACCGGTGGGGCATTACC
GGTAAATGTCGTCGAGGAATTGAAAACAAGCTGA

Upstream 100 bases:

>100_bases
ACTTTTACAAAGCATTTCGTTTTGTGTAATATATAAGTGTTGATAGTTTTGACAGAGCGCTTTGAAAAAATGAAATCAAT
TAATTAAATGAAAGGAAAAT

Downstream 100 bases:

>100_bases
TTGGATTTTGAATGTTTGGGGGCTCCAACCAATAAACGCAAATATAAACAGTCCTATGAGCTTATTCGTTTTAAGAACTA
TCCAGATGATGTACCTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MVKVYQKENVYEAFNHRLDYICNYFDHLIISFSGGKDSGLMLELVYLYYKSHKLVEKGIKVSVFYLDYEGNYQETKDYIH
RSMGKYPEFEYYHICLPVSASCGISMSQSTWLPWDPDHKELWLNTIPKGAIHLENQDFSFFKVGMSDYDFQSKFCQWLHN
EKGATRTAVLVGIRAQESLNRYNAVTRDETFSRFGTTNYSHRISKDVFNFYPMYDWLFADIWRANAKFEFDYNHLYDLYY
QAGVPFKSMRVANPFHQCGVHSLKLYQALEPETWGKLVGRVNGANFAALYGGTQAMGYRGAVLPKGHTWQSYVEFLLDTL
PEETRNVYRKKFQSSMDYWMRTGGALPVNVVEELKTS

Sequences:

>Translated_357_residues
MVKVYQKENVYEAFNHRLDYICNYFDHLIISFSGGKDSGLMLELVYLYYKSHKLVEKGIKVSVFYLDYEGNYQETKDYIH
RSMGKYPEFEYYHICLPVSASCGISMSQSTWLPWDPDHKELWLNTIPKGAIHLENQDFSFFKVGMSDYDFQSKFCQWLHN
EKGATRTAVLVGIRAQESLNRYNAVTRDETFSRFGTTNYSHRISKDVFNFYPMYDWLFADIWRANAKFEFDYNHLYDLYY
QAGVPFKSMRVANPFHQCGVHSLKLYQALEPETWGKLVGRVNGANFAALYGGTQAMGYRGAVLPKGHTWQSYVEFLLDTL
PEETRNVYRKKFQSSMDYWMRTGGALPVNVVEELKTS
>Mature_357_residues
MVKVYQKENVYEAFNHRLDYICNYFDHLIISFSGGKDSGLMLELVYLYYKSHKLVEKGIKVSVFYLDYEGNYQETKDYIH
RSMGKYPEFEYYHICLPVSASCGISMSQSTWLPWDPDHKELWLNTIPKGAIHLENQDFSFFKVGMSDYDFQSKFCQWLHN
EKGATRTAVLVGIRAQESLNRYNAVTRDETFSRFGTTNYSHRISKDVFNFYPMYDWLFADIWRANAKFEFDYNHLYDLYY
QAGVPFKSMRVANPFHQCGVHSLKLYQALEPETWGKLVGRVNGANFAALYGGTQAMGYRGAVLPKGHTWQSYVEFLLDTL
PEETRNVYRKKFQSSMDYWMRTGGALPVNVVEELKTS

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=351, Percent_Identity=31.9088319088319, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 41793; Mature: 41793

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVYQKENVYEAFNHRLDYICNYFDHLIISFSGGKDSGLMLELVYLYYKSHKLVEKGIK
CCEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCE
VSVFYLDYEGNYQETKDYIHRSMGKYPEFEYYHICLPVSASCGISMSQSTWLPWDPDHKE
EEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
LWLNTIPKGAIHLENQDFSFFKVGMSDYDFQSKFCQWLHNEKGATRTAVLVGIRAQESLN
HHHHCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHH
RYNAVTRDETFSRFGTTNYSHRISKDVFNFYPMYDWLFADIWRANAKFEFDYNHLYDLYY
HHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH
QAGVPFKSMRVANPFHQCGVHSLKLYQALEPETWGKLVGRVNGANFAALYGGTQAMGYRG
HCCCCHHHHHHCCHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCHHCCCCC
AVLPKGHTWQSYVEFLLDTLPEETRNVYRKKFQSSMDYWMRTGGALPVNVVEELKTS
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MVKVYQKENVYEAFNHRLDYICNYFDHLIISFSGGKDSGLMLELVYLYYKSHKLVEKGIK
CCEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCE
VSVFYLDYEGNYQETKDYIHRSMGKYPEFEYYHICLPVSASCGISMSQSTWLPWDPDHKE
EEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
LWLNTIPKGAIHLENQDFSFFKVGMSDYDFQSKFCQWLHNEKGATRTAVLVGIRAQESLN
HHHHCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHH
RYNAVTRDETFSRFGTTNYSHRISKDVFNFYPMYDWLFADIWRANAKFEFDYNHLYDLYY
HHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH
QAGVPFKSMRVANPFHQCGVHSLKLYQALEPETWGKLVGRVNGANFAALYGGTQAMGYRG
HCCCCHHHHHHCCHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCHHCCCCC
AVLPKGHTWQSYVEFLLDTLPEETRNVYRKKFQSSMDYWMRTGGALPVNVVEELKTS
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]