BacMap

Definition	Lactococcus lactis subsp. cremoris MG1363, complete genome.
Accession	NC_009004
Length	2,529,478

Click here to switch to the map view.

The map label for this gene is ydfG [C]

Identifier: 125623855

GI number: 125623855

Start: 986437

End: 987216

Strand: Reverse

Name: ydfG [C]

Synonym: llmg_1019

Alternate gene names: 125623855

Gene position: 987216-986437 (Counterclockwise)

Preceding gene: 125623857

Following gene: 125623853

Centisome position: 39.03

GC content: 36.67

Gene sequence:

>780_bases
ATGTTGTATAATCAGTATATCAAAAAAATACTCTTAAGGAGAAATAAAATGTCTAAACCACTTATTGTTATAACAGGAGC
AAGTTCAGGCTTCGGTGCCGAAATCGCAAAACTCTTTAATGCTGACGGATTCCCAATCTTGCTTTTAGGGCGTCGCACTG
ATAAAATTAAAGCTTTGCCTCTTGATTTTACAAATGTTCTTGTGGAATCTGTAGATGTCACAGATAAAAAATCTTTTGAA
ATTGCTATTTCTAAAGCTGAGGAAAAATATGGCAAAACTGACCTTTTGGTCAACAATGCAGGTGTCATGTTACTAGGAAA
CGTCCTAAATCAAGATCCAGCCGAGTGGAAACAAATGATGGATACTAATGTTTTAGGTGTTCTCAATGGAATGCAAATTG
TTCTTCCACAAATGGTTGAACGTCAAGGAGGAACAGTGATTAATATGTCCTCACTTGCTGGTAAAAAAACTTTTACCAAT
CACGCCGCTTATGTCGCTTCAAAATTTGGTGTCCATGGTTTAAGTGAAACTGTCAGAGAAGAAGTTTCTGCTAAAAATGT
TCGAATTTCACTTGTTGCACCTGGTGCTGCCGAAACAGAATTATTGACACATGTTACTGACAAAAGTGCCCTAAATGATT
ATAATCTTTGGAAAGAATCAATGGGTGGTACAACTCTAGCCTCTGAACGAGTTGCTCAAACCGTGAAATTCATTTATGAT
ATGCCTCAATCTGTTAATATCAGAGAAATCGATATTGCGGCAACCAATCAAAATGCTTAA

Upstream 100 bases:

>100_bases
ATCATAATAACGTACAGCATCATTAGAAACATTCAATTTACGTGAAATATCACCAATTGTATATTTTGTCATTCTTTCTC
CTTGACATGGAGTTAACTCC

Downstream 100 bases:

>100_bases
TATTTAATATCTTAGCTAAAAAAAGATACTAGTTGACCGCTAGTATCTTTTTTAGCTATTTATTTCATATTTTATCTACC
CGAAAACTAGCCTCACTCTT

Product: oxidoreductase, short-chain dehydrogenase/reductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLYNQYIKKILLRRNKMSKPLIVITGASSGFGAEIAKLFNADGFPILLLGRRTDKIKALPLDFTNVLVESVDVTDKKSFE
IAISKAEEKYGKTDLLVNNAGVMLLGNVLNQDPAEWKQMMDTNVLGVLNGMQIVLPQMVERQGGTVINMSSLAGKKTFTN
HAAYVASKFGVHGLSETVREEVSAKNVRISLVAPGAAETELLTHVTDKSALNDYNLWKESMGGTTLASERVAQTVKFIYD
MPQSVNIREIDIAATNQNA

Sequences:

>Translated_259_residues
MLYNQYIKKILLRRNKMSKPLIVITGASSGFGAEIAKLFNADGFPILLLGRRTDKIKALPLDFTNVLVESVDVTDKKSFE
IAISKAEEKYGKTDLLVNNAGVMLLGNVLNQDPAEWKQMMDTNVLGVLNGMQIVLPQMVERQGGTVINMSSLAGKKTFTN
HAAYVASKFGVHGLSETVREEVSAKNVRISLVAPGAAETELLTHVTDKSALNDYNLWKESMGGTTLASERVAQTVKFIYD
MPQSVNIREIDIAATNQNA
>Mature_259_residues
MLYNQYIKKILLRRNKMSKPLIVITGASSGFGAEIAKLFNADGFPILLLGRRTDKIKALPLDFTNVLVESVDVTDKKSFE
IAISKAEEKYGKTDLLVNNAGVMLLGNVLNQDPAEWKQMMDTNVLGVLNGMQIVLPQMVERQGGTVINMSSLAGKKTFTN
HAAYVASKFGVHGLSETVREEVSAKNVRISLVAPGAAETELLTHVTDKSALNDYNLWKESMGGTTLASERVAQTVKFIYD
MPQSVNIREIDIAATNQNA

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=191, Percent_Identity=30.3664921465969, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI4503817, Length=196, Percent_Identity=35.2040816326531, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI40254992, Length=223, Percent_Identity=26.457399103139, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI7706318, Length=196, Percent_Identity=27.0408163265306, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI109715829, Length=250, Percent_Identity=24.8, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI157739938, Length=218, Percent_Identity=27.0642201834862, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI19743808, Length=194, Percent_Identity=31.4432989690722, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI4758504, Length=199, Percent_Identity=28.1407035175879, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI22507405, Length=195, Percent_Identity=31.7948717948718, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI7657478, Length=188, Percent_Identity=30.8510638297872, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI223718074, Length=201, Percent_Identity=30.3482587064677, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI150247226, Length=192, Percent_Identity=30.7291666666667, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI31542939, Length=210, Percent_Identity=25.7142857142857, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI32483357, Length=199, Percent_Identity=24.6231155778894, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI5031737, Length=214, Percent_Identity=27.1028037383178, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI33667109, Length=197, Percent_Identity=27.4111675126904, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI44680136, Length=190, Percent_Identity=26.8421052631579, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI44680133, Length=190, Percent_Identity=26.8421052631579, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI17738292, Length=190, Percent_Identity=26.8421052631579, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI40548397, Length=205, Percent_Identity=28.2926829268293, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI214010158, Length=205, Percent_Identity=28.2926829268293, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI214010156, Length=205, Percent_Identity=28.2926829268293, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI22758144, Length=205, Percent_Identity=28.2926829268293, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI4557649, Length=220, Percent_Identity=28.6363636363636, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI66933014, Length=133, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI7705925, Length=181, Percent_Identity=25.9668508287293, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI32455239, Length=207, Percent_Identity=27.536231884058, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI5031765, Length=207, Percent_Identity=27.536231884058, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI50726952, Length=198, Percent_Identity=29.2929292929293, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=26.7441860465116, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI19923817, Length=208, Percent_Identity=21.1538461538462, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI83715985, Length=200, Percent_Identity=27.5, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787820, Length=245, Percent_Identity=28.1632653061224, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87082100, Length=206, Percent_Identity=31.0679611650485, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787335, Length=189, Percent_Identity=28.042328042328, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1786701, Length=187, Percent_Identity=28.3422459893048, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788459, Length=185, Percent_Identity=28.6486486486486, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1787526, Length=192, Percent_Identity=27.0833333333333, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790717, Length=200, Percent_Identity=28, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87082160, Length=187, Percent_Identity=25.668449197861, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786812, Length=180, Percent_Identity=26.1111111111111, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787905, Length=200, Percent_Identity=27, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=184, Percent_Identity=28.804347826087, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994604, Length=207, Percent_Identity=28.5024154589372, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17551412, Length=246, Percent_Identity=28.0487804878049, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115534660, Length=208, Percent_Identity=27.8846153846154, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17563726, Length=244, Percent_Identity=26.2295081967213, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71997402, Length=198, Percent_Identity=28.7878787878788, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=199, Percent_Identity=26.6331658291457, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17570069, Length=189, Percent_Identity=29.6296296296296, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=245, Percent_Identity=24.8979591836735, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=198, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=198, Percent_Identity=26.2626262626263, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=199, Percent_Identity=29.1457286432161, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=249, Percent_Identity=24.4979919678715, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=243, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=190, Percent_Identity=24.2105263157895, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=24.4186046511628, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=201, Percent_Identity=26.3681592039801, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17564282, Length=220, Percent_Identity=25.4545454545455, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=206, Percent_Identity=26.2135922330097, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=26.6331658291457, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193203117, Length=194, Percent_Identity=29.3814432989691, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=253, Percent_Identity=30.0395256916996, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6322067, Length=225, Percent_Identity=29.3333333333333, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322227, Length=191, Percent_Identity=24.6073298429319, Blast_Score=70, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322226, Length=215, Percent_Identity=26.5116279069767, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=29.5918367346939, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24641232, Length=245, Percent_Identity=30.6122448979592, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI23397609, Length=179, Percent_Identity=31.2849162011173, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI116007236, Length=245, Percent_Identity=29.3877551020408, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24644339, Length=187, Percent_Identity=32.0855614973262, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21357041, Length=186, Percent_Identity=31.1827956989247, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24641388, Length=248, Percent_Identity=29.8387096774194, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28571387, Length=249, Percent_Identity=26.9076305220884, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28571526, Length=192, Percent_Identity=28.6458333333333, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI281364892, Length=213, Percent_Identity=28.169014084507, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281364494, Length=252, Percent_Identity=26.984126984127, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI116007234, Length=245, Percent_Identity=27.7551020408163, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21355319, Length=234, Percent_Identity=26.9230769230769, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116007238, Length=173, Percent_Identity=31.7919075144509, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24648693, Length=252, Percent_Identity=26.1904761904762, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355889, Length=252, Percent_Identity=26.1904761904762, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24648944, Length=249, Percent_Identity=28.5140562248996, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24643142, Length=181, Percent_Identity=25.9668508287293, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24640492, Length=190, Percent_Identity=27.8947368421053, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24639444, Length=229, Percent_Identity=24.4541484716157, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007232, Length=182, Percent_Identity=31.3186813186813, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17737361, Length=199, Percent_Identity=26.1306532663317, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24649181, Length=186, Percent_Identity=29.5698924731183, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21355631, Length=247, Percent_Identity=23.4817813765182, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21357673, Length=210, Percent_Identity=27.1428571428571, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24663911, Length=247, Percent_Identity=25.5060728744939, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28364; Mature: 28364

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYNQYIKKILLRRNKMSKPLIVITGASSGFGAEIAKLFNADGFPILLLGRRTDKIKALP
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEECC
LDFTNVLVESVDVTDKKSFEIAISKAEEKYGKTDLLVNNAGVMLLGNVLNQDPAEWKQMM
CCHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCEEEEECCCCEEECHHHCCCHHHHHHHH
DTNVLGVLNGMQIVLPQMVERQGGTVINMSSLAGKKTFTNHAAYVASKFGVHGLSETVRE
CCCHHHHHCCHHHHHHHHHHHCCCCEEEHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
EVSAKNVRISLVAPGAAETELLTHVTDKSALNDYNLWKESMGGTTLASERVAQTVKFIYD
HHHHCCEEEEEEECCCCHHHHHHHHHCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
MPQSVNIREIDIAATNQNA
CCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MLYNQYIKKILLRRNKMSKPLIVITGASSGFGAEIAKLFNADGFPILLLGRRTDKIKALP
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEECC
LDFTNVLVESVDVTDKKSFEIAISKAEEKYGKTDLLVNNAGVMLLGNVLNQDPAEWKQMM
CCHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCEEEEECCCCEEECHHHCCCHHHHHHHH
DTNVLGVLNGMQIVLPQMVERQGGTVINMSSLAGKKTFTNHAAYVASKFGVHGLSETVRE
CCCHHHHHCCHHHHHHHHHHHCCCCEEEHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
EVSAKNVRISLVAPGAAETELLTHVTDKSALNDYNLWKESMGGTTLASERVAQTVKFIYD
HHHHCCEEEEEEECCCCHHHHHHHHHCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
MPQSVNIREIDIAATNQNA
CCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA