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The map label for this gene is yfnB [H]

Identifier: 125623832

GI number: 125623832

Start: 960356

End: 961048

Strand: Direct

Name: yfnB [H]

Synonym: llmg_0995

Alternate gene names: 125623832

Gene position: 960356-961048 (Clockwise)

Preceding gene: 125623831

Following gene: 125623834

Centisome position: 37.97

GC content: 37.66

Gene sequence:

>693_bases
ATGACTGTACTACTTTTTGATATCGATAACACTCTACTTGATTTTGATAAAGCAGAATATGATGCTTTGGGGAAAATTTT
TGCCCATTATCAAATTGAAGATAATCAAGAAAACCGAGCGACTTATTCACGCGAAAATAAAGCCTTGTGGCGCCTACATG
AATCGGAAAAGCTTTCTCGAGAAGAATTGTTGAGCACGCGATTTGACCATGCTTTTCGAGCTTTAAATGTGTCAGTAAAC
TATAATCCAGTAGCGGTTGATGATGAATACCAACTTTACTTATCACAAGGTCACGAGCTAATCAATCACGCAAATGAGTT
ACTGACAGAACTGTCAGCAAAAGAAGCAGAAATGTATGTGGTCAGCAATGGAACTTCACGTGTTTCACGCCCACGAATAT
TTGAATCTGGAATTTCTGACCATTTTCGAGAAATCTTTATCAGCGAAGAAGTTGGTCATCACAAACCTTCTCTTGCCTTC
TTTGATTACGTTTTTGACCACATTGAAGCAGCGAACAAAAAGGAATTTACAATTGTTGGTGATTCTCTAGCAACCGACAT
TTTAGGTGGGAATAGAGCTGGAATTAAAACAATCTGGTACAATCCCAAACAATTGGAAGTGACTGGCGAAGCACAACCAG
ATGTACAAATTCAAGATTTACTAGAAATTCCATCATTGGTTAAAAATTGGTAA

Upstream 100 bases:

>100_bases
GTAGAATTTTTGTCATCTACAATCTAAAAAATAATTTTCGATACTTTTTTCTGCTATAATGTAAGGAATGCAAAGAATAC
ATTTAGCAAAGGAAATAGAA

Downstream 100 bases:

>100_bases
TAAAAAAACACTGTTTGTTTAACAGTGTTTTTTTTATTTATACTTTTACTTTTTTTCTTAAAAAGAGACTTGAGATAAAT
CCTACGGATACGAAGATAAG

Product: hydrolase, haloacid dehalogenase-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTVLLFDIDNTLLDFDKAEYDALGKIFAHYQIEDNQENRATYSRENKALWRLHESEKLSREELLSTRFDHAFRALNVSVN
YNPVAVDDEYQLYLSQGHELINHANELLTELSAKEAEMYVVSNGTSRVSRPRIFESGISDHFREIFISEEVGHHKPSLAF
FDYVFDHIEAANKKEFTIVGDSLATDILGGNRAGIKTIWYNPKQLEVTGEAQPDVQIQDLLEIPSLVKNW

Sequences:

>Translated_230_residues
MTVLLFDIDNTLLDFDKAEYDALGKIFAHYQIEDNQENRATYSRENKALWRLHESEKLSREELLSTRFDHAFRALNVSVN
YNPVAVDDEYQLYLSQGHELINHANELLTELSAKEAEMYVVSNGTSRVSRPRIFESGISDHFREIFISEEVGHHKPSLAF
FDYVFDHIEAANKKEFTIVGDSLATDILGGNRAGIKTIWYNPKQLEVTGEAQPDVQIQDLLEIPSLVKNW
>Mature_229_residues
TVLLFDIDNTLLDFDKAEYDALGKIFAHYQIEDNQENRATYSRENKALWRLHESEKLSREELLSTRFDHAFRALNVSVNY
NPVAVDDEYQLYLSQGHELINHANELLTELSAKEAEMYVVSNGTSRVSRPRIFESGISDHFREIFISEEVGHHKPSLAFF
DYVFDHIEAANKKEFTIVGDSLATDILGGNRAGIKTIWYNPKQLEVTGEAQPDVQIQDLLEIPSLVKNW

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Escherichia coli, GI1790833, Length=224, Percent_Identity=28.125, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26437; Mature: 26306

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLFDIDNTLLDFDKAEYDALGKIFAHYQIEDNQENRATYSRENKALWRLHESEKLSR
CEEEEEECCCHHHHCCHHHHHHHHHHHEEEEECCCCCCCCHHCCCCHHHEEECCHHHCCH
EELLSTRFDHAFRALNVSVNYNPVAVDDEYQLYLSQGHELINHANELLTELSAKEAEMYV
HHHHHHHHHHHHEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
VSNGTSRVSRPRIFESGISDHFREIFISEEVGHHKPSLAFFDYVFDHIEAANKKEFTIVG
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
DSLATDILGGNRAGIKTIWYNPKQLEVTGEAQPDVQIQDLLEIPSLVKNW
CHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVLLFDIDNTLLDFDKAEYDALGKIFAHYQIEDNQENRATYSRENKALWRLHESEKLSR
EEEEEECCCHHHHCCHHHHHHHHHHHEEEEECCCCCCCCHHCCCCHHHEEECCHHHCCH
EELLSTRFDHAFRALNVSVNYNPVAVDDEYQLYLSQGHELINHANELLTELSAKEAEMYV
HHHHHHHHHHHHEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
VSNGTSRVSRPRIFESGISDHFREIFISEEVGHHKPSLAFFDYVFDHIEAANKKEFTIVG
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
DSLATDILGGNRAGIKTIWYNPKQLEVTGEAQPDVQIQDLLEIPSLVKNW
CHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]