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The map label for this gene is licC [H]

Identifier: 125623802

GI number: 125623802

Start: 928743

End: 930098

Strand: Direct

Name: licC [H]

Synonym: llmg_0963

Alternate gene names: 125623802

Gene position: 928743-930098 (Clockwise)

Preceding gene: 125623801

Following gene: 125623803

Centisome position: 36.72

GC content: 36.06

Gene sequence:

>1356_bases
ATGGACAAATTTGAAAAATGGCTAAATAAGACCTTGATGCCACTTGCCTCAAAAATGAATAAAAATCATTTCATTTCGGC
ATTAAGTGAAGCATTTATGAGATGTATGCCCTTAACATTAGGGATTGCATTATTGACAATTATAGGATACTTTCCAGTTC
CTGCCTGGGTAGATTTCTTAAACTCTATTGGACTGGCTCAGCATTTTTCAGCAGTTATTGGTGCAGTTACCAGTGCGCTA
GCAATTTATGTAACTTATAATTTTGCTTATTCTTATGTAAATCGTCATGAATATAATGGCCATACGGCCGGTTTATTATC
AATCGCAAGTTTGTTAATGCTAATGCCACAAATTATTACTGTCCCTGTAGTAAAAAACATTCCAACCGAATTTCCGAAAT
CCGCGGTAGTTGACAGTGTGTCAAATGTTGAAGCATTTCAAACGGTATACACGGGTAGCACAGGATTAATTGTAGCAATC
ATAATTGGTTTTATTGTTTCATTAGTCTATATACAATTGAGCAAAAGAAATTTAGTTATTAAATTACCAGCTGGAGTTCC
TCCAATGGTTGTAGATTCACTAAGTCCAGCAATTATTTCAATGGTGATTTTCTGTTTGATGTTCGGGATTCGTGTGGGAT
TCTCTTATACGCCATTCCATGATATTTTCAATTTCTCAACACAACTAATTCAAGCACCGTTGACTGGTGCTGTGGCAAAT
CCATGGGTTCTTATGGGCATCTTTACCTTTGGTAATTTCTTATGGTTCTTTGGTATCCACCCTAATTTAATTGGGGGAAT
TTTAAATCCATTGTTATTAACAATGTCATATGCTAATATTGATGCCTATGCTGCCGGAAAACCTGTACCATACTTACAAA
TGATGATTGTGTTTGCTGTGGGTGCGAACGCATGGGGCGGAAGTGGAAATACTTATGGGTTAGTTATTTCAATGTTTACG
GCAAAATCTGAACGCTATAAACAATTATTAAAATTAGGTGCAATTCCTAGTATTTTCAATATCAGTGAACCATTACTTTT
TGGTCTTCCAATGATGTTAAATCCTCTTTTCTTTATTCCTTTGGTTTTCCAACCAGCAATTTTAGGAACTGTAGCATTGG
GCTTGGCAAAGATATTATATATTACAAATCTGAATCCAATGACGGCACTTCTTCCTTGGACGACACCAGCACCTGTGAGA
ATGGCCATTTCAGGTGGACTTCCATTTTTGATTATTTTTGCAATCTGTTTAGTCTTGAATGTTCTTATTTACTACCCATT
CTTTAAGGTGGCGTATAATAAAGCTTTAGAAGAAGAAAAAGCAGCTGTTGAATTAGAGGGTTCAGAAACTGCCTGA

Upstream 100 bases:

>100_bases
GAGTAAAACTAAATTTATTGATGGTTTTACGAATTAATTAGGATATTTTTTTTAAAAACCAAAGAAAACGCTTACAAACG
TTAAAGGAGTGAATCTAAAG

Downstream 100 bases:

>100_bases
TGGATATTTTTTATAAATCTGGTTTGAACAAATTATATTGACATCTCTTTTTCTATCCTGATAATTCTGAGAGGTTATTT
TGGGAAATACTATTGAACCA

Product: PTS system, IIC component

Products: pyruvate; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm] [C]

Alternate protein names: EIIC-Lic; PTS system lichenan-specific EIIC component [H]

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MDKFEKWLNKTLMPLASKMNKNHFISALSEAFMRCMPLTLGIALLTIIGYFPVPAWVDFLNSIGLAQHFSAVIGAVTSAL
AIYVTYNFAYSYVNRHEYNGHTAGLLSIASLLMLMPQIITVPVVKNIPTEFPKSAVVDSVSNVEAFQTVYTGSTGLIVAI
IIGFIVSLVYIQLSKRNLVIKLPAGVPPMVVDSLSPAIISMVIFCLMFGIRVGFSYTPFHDIFNFSTQLIQAPLTGAVAN
PWVLMGIFTFGNFLWFFGIHPNLIGGILNPLLLTMSYANIDAYAAGKPVPYLQMMIVFAVGANAWGGSGNTYGLVISMFT
AKSERYKQLLKLGAIPSIFNISEPLLFGLPMMLNPLFFIPLVFQPAILGTVALGLAKILYITNLNPMTALLPWTTPAPVR
MAISGGLPFLIIFAICLVLNVLIYYPFFKVAYNKALEEEKAAVELEGSETA

Sequences:

>Translated_451_residues
MDKFEKWLNKTLMPLASKMNKNHFISALSEAFMRCMPLTLGIALLTIIGYFPVPAWVDFLNSIGLAQHFSAVIGAVTSAL
AIYVTYNFAYSYVNRHEYNGHTAGLLSIASLLMLMPQIITVPVVKNIPTEFPKSAVVDSVSNVEAFQTVYTGSTGLIVAI
IIGFIVSLVYIQLSKRNLVIKLPAGVPPMVVDSLSPAIISMVIFCLMFGIRVGFSYTPFHDIFNFSTQLIQAPLTGAVAN
PWVLMGIFTFGNFLWFFGIHPNLIGGILNPLLLTMSYANIDAYAAGKPVPYLQMMIVFAVGANAWGGSGNTYGLVISMFT
AKSERYKQLLKLGAIPSIFNISEPLLFGLPMMLNPLFFIPLVFQPAILGTVALGLAKILYITNLNPMTALLPWTTPAPVR
MAISGGLPFLIIFAICLVLNVLIYYPFFKVAYNKALEEEKAAVELEGSETA
>Mature_451_residues
MDKFEKWLNKTLMPLASKMNKNHFISALSEAFMRCMPLTLGIALLTIIGYFPVPAWVDFLNSIGLAQHFSAVIGAVTSAL
AIYVTYNFAYSYVNRHEYNGHTAGLLSIASLLMLMPQIITVPVVKNIPTEFPKSAVVDSVSNVEAFQTVYTGSTGLIVAI
IIGFIVSLVYIQLSKRNLVIKLPAGVPPMVVDSLSPAIISMVIFCLMFGIRVGFSYTPFHDIFNFSTQLIQAPLTGAVAN
PWVLMGIFTFGNFLWFFGIHPNLIGGILNPLLLTMSYANIDAYAAGKPVPYLQMMIVFAVGANAWGGSGNTYGLVISMFT
AKSERYKQLLKLGAIPSIFNISEPLLFGLPMMLNPLFFIPLVFQPAILGTVALGLAKILYITNLNPMTALLPWTTPAPVR
MAISGGLPFLIIFAICLVLNVLIYYPFFKVAYNKALEEEKAAVELEGSETA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG1455

COG function: function code G; Phosphotransferase system cellobiose-specific component IIC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788032, Length=477, Percent_Identity=29.979035639413, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003352
- InterPro:   IPR004796
- InterPro:   IPR004501 [H]

Pfam domain/function: PF02378 PTS_EIIC [H]

EC number: NA

Molecular weight: Translated: 49298; Mature: 49298

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS51105 PTS_EIIC_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCEEEECCCCCC
>Mature Secondary Structure
MDKFEKWLNKTLMPLASKMNKNHFISALSEAFMRCMPLTLGIALLTIIGYFPVPAWVDFL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NSIGLAQHFSAVIGAVTSALAIYVTYNFAYSYVNRHEYNGHTAGLLSIASLLMLMPQIIT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VPVVKNIPTEFPKSAVVDSVSNVEAFQTVYTGSTGLIVAIIIGFIVSLVYIQLSKRNLVI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
KLPAGVPPMVVDSLSPAIISMVIFCLMFGIRVGFSYTPFHDIFNFSTQLIQAPLTGAVAN
ECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PWVLMGIFTFGNFLWFFGIHPNLIGGILNPLLLTMSYANIDAYAAGKPVPYLQMMIVFAV
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHH
GANAWGGSGNTYGLVISMFTAKSERYKQLLKLGAIPSIFNISEPLLFGLPMMLNPLFFIP
CCCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHCCCCCHHCCCCHHHHCCHHHHHHHHHHH
LVFQPAILGTVALGLAKILYITNLNPMTALLPWTTPAPVRMAISGGLPFLIIFAICLVLN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCEEEEECCCCHHHHHHHHHHHHH
VLIYYPFFKVAYNKALEEEKAAVELEGSETA
HHHHHHHHHHHHHHHHHHHHCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: diacetylchitobiose [Periplasm]; phosphoenolpyruvate; cellobiose [Periplasm] [C]

Specific reaction: phosphoenolpyruvate + diacetylchitobiose [Periplasm] = pyruvate + diacetylchitobiose-6-phosphate [Cytoplasm] phosphoenolpyruvate + cellobiose [Periplasm] = cellobiose-6-phosphate [Cytoplasm] + pyruvate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]