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The map label for this gene is rpe2 [H]

Identifier: 125623796

GI number: 125623796

Start: 923672

End: 924322

Strand: Direct

Name: rpe2 [H]

Synonym: llmg_0957

Alternate gene names: 125623796

Gene position: 923672-924322 (Clockwise)

Preceding gene: 125623794

Following gene: 125623797

Centisome position: 36.52

GC content: 34.41

Gene sequence:

>651_bases
ATGTCAAAAAAATTGTTATGTCCATCAATGATGTGTGCAAATTTTGCTAATTTGGAGAAGGATACAAAAGATTTAGAAGT
TGCTGGTGTGGATATCTTTCATATGGATATCATGGATGGTTCCTTTGTTCCCAATTTTGGAATGGGCCTGCAAGATTATG
AGTTGATTCGTTCGGTGACTGATAAACCCTTAGATGTCCATTTGATGGTTCAAAACCCGTCGAATTATGTTGAAATGTTT
TCCGACTTGGGAGCTGATATTATTTATATTCATCCTGAAGCAGATATCCATCCCGCTCGTACATTAGATAAGATTCGAGC
CAAAGGAAAAAAAGCAGGAATCGCTATTAATCCGGGCACATCCATTGAAGCAGTAATAGAATTGCTGCCATTAGTTGATT
ATTTTATGATAATGACAGTAAATCCAGGCTTTGCTGGTCAAAAATATCTGGAATATGTAAATTCTAAAATTGAAAAGGCT
GTTTCATTAAGTAAACAATTTGACTTTAAAGTAATGGTAGATGGAGCGATTTCACCACAGAAAATTGAAGAACTAAGTAA
GTTAGGCGTTGAAGGGTTTATTTTAGGAACTTCCGCTTTATTTGGGAAACATAAAAATTATGAAACAATAATCAATGAAT
TAAGAGCTTAA

Upstream 100 bases:

>100_bases
GACAGGTTGTTTTCCTGATGATATAATAAAATCATAAAAGAAGTAAACGATTACCCATGATGGTATTGTCTGGGTAATCG
TTATCTCAAAGAGTGAGAAA

Downstream 100 bases:

>100_bases
TGGAGGAAAAAGAGGATGAAATTAGCAATTGGTAGCGACCATGTAGGATTTGAATTGAAACCCCTTATTATTGACTATCG
TGAGGAGTTGGGGCACGAAG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSKKLLCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSVTDKPLDVHLMVQNPSNYVEMF
SDLGADIIYIHPEADIHPARTLDKIRAKGKKAGIAINPGTSIEAVIELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKA
VSLSKQFDFKVMVDGAISPQKIEELSKLGVEGFILGTSALFGKHKNYETIINELRA

Sequences:

>Translated_216_residues
MSKKLLCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSVTDKPLDVHLMVQNPSNYVEMF
SDLGADIIYIHPEADIHPARTLDKIRAKGKKAGIAINPGTSIEAVIELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKA
VSLSKQFDFKVMVDGAISPQKIEELSKLGVEGFILGTSALFGKHKNYETIINELRA
>Mature_215_residues
SKKLLCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSVTDKPLDVHLMVQNPSNYVEMFS
DLGADIIYIHPEADIHPARTLDKIRAKGKKAGIAINPGTSIEAVIELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKAV
SLSKQFDFKVMVDGAISPQKIEELSKLGVEGFILGTSALFGKHKNYETIINELRA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=211, Percent_Identity=32.7014218009479, Blast_Score=120, Evalue=6e-28,
Organism=Homo sapiens, GI219879828, Length=211, Percent_Identity=30.8056872037915, Blast_Score=107, Evalue=8e-24,
Organism=Homo sapiens, GI24307923, Length=169, Percent_Identity=28.4023668639053, Blast_Score=77, Evalue=8e-15,
Organism=Escherichia coli, GI1789788, Length=219, Percent_Identity=35.6164383561644, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1790523, Length=204, Percent_Identity=34.8039215686275, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790754, Length=174, Percent_Identity=29.3103448275862, Blast_Score=95, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=200, Percent_Identity=38, Blast_Score=141, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6322341, Length=212, Percent_Identity=35.8490566037736, Blast_Score=139, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24586301, Length=212, Percent_Identity=30.188679245283, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23995; Mature: 23864

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLLCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSVT
CCCCCCCHHHHHHHHHHCCCCCCCEEEECEEEEEEEECCCCCCCCCCCCCHHHHHHHHHC
DKPLDVHLMVQNPSNYVEMFSDLGADIIYIHPEADIHPARTLDKIRAKGKKAGIAINPGT
CCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCC
SIEAVIELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKAVSLSKQFDFKVMVDGAISPQ
CHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
KIEELSKLGVEGFILGTSALFGKHKNYETIINELRA
HHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SKKLLCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSVT
CCCCCCHHHHHHHHHHCCCCCCCEEEECEEEEEEEECCCCCCCCCCCCCHHHHHHHHHC
DKPLDVHLMVQNPSNYVEMFSDLGADIIYIHPEADIHPARTLDKIRAKGKKAGIAINPGT
CCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCC
SIEAVIELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKAVSLSKQFDFKVMVDGAISPQ
CHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
KIEELSKLGVEGFILGTSALFGKHKNYETIINELRA
HHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]