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The map label for this gene is 125623728

Identifier: 125623728

GI number: 125623728

Start: 854784

End: 856241

Strand: Direct

Name: 125623728

Synonym: llmg_0884

Alternate gene names: NA

Gene position: 854784-856241 (Clockwise)

Preceding gene: 125623727

Following gene: 125623729

Centisome position: 33.79

GC content: 37.04

Gene sequence:

>1458_bases
ATGACTGACATGAAAAAATCAACAACAATGGAGCGTCAAAAAAGAATTGTCGAAATTTTAAGGCTCTTGCATGAGGGTGG
TTCATTTGAGGAGGCAAAACAAATCTTCAATGAAGAGTTTGATGGAGTTGATGTGTCTGAAATTACCGGTGCTGAAAAAG
CATTAATTCAAGGAGGACTCAATCCGTCAGAAATTCAAAAATTATGTAATATTCATGCGGCTGTTTTTAAGGGTTCAATC
AAAGATATCCATCAGTCTTCTTTAGAAGAAAATATTCCAGGTCATCCAGTTCATACAATGAAACTCGAAAATCAGGTGAT
TGCTTCCTTACTAAATGACGAAATTCGTTGGGTCTTTTCTAAAATTGAAAAAGGAGATTGGACTTTGAAGGGTCGTTTAC
TTGCGGCAGTGGAAGACTTATATAATATTGATAAGCATTATGCTAGAAAAGAAACATTGATTTTTTCTTTTATGGAAAAA
TATGGAATCACTGCGCCACCAAAAGTGATGTGGGGTGTAGATGATGCCGTGCGAGAGATGAATAAAGAAGTCATTGCTTA
TTTAAAAACAGACAAAACAGCTTTAAACCCATTACGCGAAATGCTGGAAAATTTACTGACAGAAATTGAAGAGATGATTT
TTAAAGAAGAAGCAATCATGATTCCAATGTGTTTAGATGTTTTTTCTTTAAAGGATTGGGAACAGATTGAGGAGGATTCT
AATGAAATTGGTTATTCATTTATTGCAGAGCCTTTAAAATGGCAAGCGTCTAAGGAATCAATTGCAAAGGAAAAAGAACG
GGAACCACAAAGGCTTGTGGCGATTGAGTCTGCTAAGGCAATGACAGCAGATATTGCCAATGAGGGAGCTCCTAAAGTTG
TTAAATCAAAAGAGCTAAAGCGTCAATATGATTGGGAAAAGGTAGAAAGTGAGGGAGTGGTTGTTTTGCCAACTGGGATG
ATGCACCTCAATGAATTGACAGCTTTATTTAATGTTCTACCTGTTGACTTGAGTTTTGTTGATAAAGAGGATATTGTTCG
GTTTTTCTCTGGGGGAGAACGAATTTTCCCACGCGCAAAATCTGTGATTGGACGGCGTGTCATTGACTGTCATCCGCCAA
AATCAATGGCTGTGGTTGAAAAAATATTGGAAGACTTTAAATCAGGTGCGCGTGATCAGGCTGATTTTTGGATTGATCTG
CATCGTTTTAATAAAAAAGTTTATATTCGCTACTTTGCGATGAGGGATGAAGAAACAGGAGAATATCTGGGGTGTTTGGA
AGTTTCGCAAGATATTACGGCCATTCAGAACTTGGTAGGAGAAAAGCGTTTAGATGGTCATGAAAAAACGACTTCTGAAT
ATGAGAATCAAGTAGCTAAATCAATGAAAAAAAATACTGACAAAGTTGCCAGTGGTGAAATGCCTGATTTTGTTAAAAAG
ATGCTAGCTGACAAATAG

Upstream 100 bases:

>100_bases
TTCCCATGGGTGCAAAAATGAAACATATTGATTGGGATAAAATTGTTTATGTTTTTGCTGAAGCTGGTTTTGAATTTTCA
AAACCGATGGAGGAAGAAAA

Downstream 100 bases:

>100_bases
ACTTTTGTTTGAGAAGATAAATTTTCTAGCCGATAAGTTAAAAATTGCTGATGGACTCTTTTCTTGATAAAATTAGGACC
GAAAATAAAATTATAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Sensory Box Protein; Pas/Pac Sensor Protein; PAS Domain S-Box; PAS Domain S-Box Protein

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MTDMKKSTTMERQKRIVEILRLLHEGGSFEEAKQIFNEEFDGVDVSEITGAEKALIQGGLNPSEIQKLCNIHAAVFKGSI
KDIHQSSLEENIPGHPVHTMKLENQVIASLLNDEIRWVFSKIEKGDWTLKGRLLAAVEDLYNIDKHYARKETLIFSFMEK
YGITAPPKVMWGVDDAVREMNKEVIAYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDS
NEIGYSFIAEPLKWQASKESIAKEKEREPQRLVAIESAKAMTADIANEGAPKVVKSKELKRQYDWEKVESEGVVVLPTGM
MHLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAKSVIGRRVIDCHPPKSMAVVEKILEDFKSGARDQADFWIDL
HRFNKKVYIRYFAMRDEETGEYLGCLEVSQDITAIQNLVGEKRLDGHEKTTSEYENQVAKSMKKNTDKVASGEMPDFVKK
MLADK

Sequences:

>Translated_485_residues
MTDMKKSTTMERQKRIVEILRLLHEGGSFEEAKQIFNEEFDGVDVSEITGAEKALIQGGLNPSEIQKLCNIHAAVFKGSI
KDIHQSSLEENIPGHPVHTMKLENQVIASLLNDEIRWVFSKIEKGDWTLKGRLLAAVEDLYNIDKHYARKETLIFSFMEK
YGITAPPKVMWGVDDAVREMNKEVIAYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDS
NEIGYSFIAEPLKWQASKESIAKEKEREPQRLVAIESAKAMTADIANEGAPKVVKSKELKRQYDWEKVESEGVVVLPTGM
MHLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAKSVIGRRVIDCHPPKSMAVVEKILEDFKSGARDQADFWIDL
HRFNKKVYIRYFAMRDEETGEYLGCLEVSQDITAIQNLVGEKRLDGHEKTTSEYENQVAKSMKKNTDKVASGEMPDFVKK
MLADK
>Mature_484_residues
TDMKKSTTMERQKRIVEILRLLHEGGSFEEAKQIFNEEFDGVDVSEITGAEKALIQGGLNPSEIQKLCNIHAAVFKGSIK
DIHQSSLEENIPGHPVHTMKLENQVIASLLNDEIRWVFSKIEKGDWTLKGRLLAAVEDLYNIDKHYARKETLIFSFMEKY
GITAPPKVMWGVDDAVREMNKEVIAYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDSN
EIGYSFIAEPLKWQASKESIAKEKEREPQRLVAIESAKAMTADIANEGAPKVVKSKELKRQYDWEKVESEGVVVLPTGMM
HLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAKSVIGRRVIDCHPPKSMAVVEKILEDFKSGARDQADFWIDLH
RFNKKVYIRYFAMRDEETGEYLGCLEVSQDITAIQNLVGEKRLDGHEKTTSEYENQVAKSMKKNTDKVASGEMPDFVKKM
LADK

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55464; Mature: 55333

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDMKKSTTMERQKRIVEILRLLHEGGSFEEAKQIFNEEFDGVDVSEITGAEKALIQGGL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCC
NPSEIQKLCNIHAAVFKGSIKDIHQSSLEENIPGHPVHTMKLENQVIASLLNDEIRWVFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
KIEKGDWTLKGRLLAAVEDLYNIDKHYARKETLIFSFMEKYGITAPPKVMWGVDDAVREM
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCHHHHHHH
NKEVIAYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
NEIGYSFIAEPLKWQASKESIAKEKEREPQRLVAIESAKAMTADIANEGAPKVVKSKELK
HHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHCCCCCHHHHHHHHH
RQYDWEKVESEGVVVLPTGMMHLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAK
HHCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCHHHHHHH
SVIGRRVIDCHPPKSMAVVEKILEDFKSGARDQADFWIDLHRFNKKVYIRYFAMRDEETG
HHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCC
EYLGCLEVSQDITAIQNLVGEKRLDGHEKTTSEYENQVAKSMKKNTDKVASGEMPDFVKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHH
MLADK
HHCCC
>Mature Secondary Structure 
TDMKKSTTMERQKRIVEILRLLHEGGSFEEAKQIFNEEFDGVDVSEITGAEKALIQGGL
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCC
NPSEIQKLCNIHAAVFKGSIKDIHQSSLEENIPGHPVHTMKLENQVIASLLNDEIRWVFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
KIEKGDWTLKGRLLAAVEDLYNIDKHYARKETLIFSFMEKYGITAPPKVMWGVDDAVREM
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCHHHHHHH
NKEVIAYLKTDKTALNPLREMLENLLTEIEEMIFKEEAIMIPMCLDVFSLKDWEQIEEDS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
NEIGYSFIAEPLKWQASKESIAKEKEREPQRLVAIESAKAMTADIANEGAPKVVKSKELK
HHCCHHHHHHHHHHCCHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHCCCCCHHHHHHHHH
RQYDWEKVESEGVVVLPTGMMHLNELTALFNVLPVDLSFVDKEDIVRFFSGGERIFPRAK
HHCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCHHHHHHH
SVIGRRVIDCHPPKSMAVVEKILEDFKSGARDQADFWIDLHRFNKKVYIRYFAMRDEETG
HHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCC
EYLGCLEVSQDITAIQNLVGEKRLDGHEKTTSEYENQVAKSMKKNTDKVASGEMPDFVKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHH
MLADK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA