| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
Click here to switch to the map view.
The map label for this gene is ps356 [H]
Identifier: 125623696
GI number: 125623696
Start: 817816
End: 819105
Strand: Direct
Name: ps356 [H]
Synonym: llmg_0851
Alternate gene names: 125623696
Gene position: 817816-819105 (Clockwise)
Preceding gene: 125623695
Following gene: 125623697
Centisome position: 32.33
GC content: 39.53
Gene sequence:
>1290_bases ATGAAAAAAGTAATTAAAAAAGCTGCCATTGGAATGGTAGCTTTCTTTGTTGTTGCAGCAAGTGGACCAGTATTTGCGGC AGTCGGTGACCAAGGGGTGGACTGGTCAAAATATAATGGAGACTATGGTAACTTTGGCTATGCTCATGATAAATTTGCTT TTAGCCAAATCGGAGGAACTTACGGTGGAACCTTTGTAGACCAAGCCACCTATGAAACGCAAGTAGCTTCAGCAATTGCT CAAGGTAAACGAGCCCATACTTATATTTGGTATCAAGTCGGAGGTTCCCAAGAAGTAGCCAAAGCAGCACTTGACCGCTA TTTACCAAGAATTCAAACACCAAAGAATTCTATTGTTGCTTTAGACTACGAAGGTGGAGCAAGTGGAGATAAGCAAGCAA ATACTGATGCGATTCTTTACGGAATGCGACGTGTAAAAGCGGCTGGATATACTCCAATGTATTATTCTTACAAGCCTTAC ACTTTGGCCAATGTCAATTATAATCAAATCATCAAAGAATTTCCTAACTCATTATGGATTGCGGCATATCCAAATTACGA AGTAACACCAGTTCCAAACTATAGCTTCTTCCCAAGTATGGACGGAATTTTAGTATTCCAGTTCACATCAACTTATGTTG CTGGCGGACTTGATGGAAATGTTGATTTAACGGGAATCACAGATAATGGATACGGAAAACAGAAAGGCCAAGAAGTTAAA CCCAATACTGCTACACCGGCCATTGAAAATGGTAAAGAAGCCAATGAAGTTAAAGGAAACGATGTAGAAGTTGGAATGAC GGTTAAAGTAAACTTTGGCGCTAAGAATTATGCCACAGGAGAAACAATTCCTCAATGGGTAAAAGGTCAACCACATAAAA TCATCCAGAAGAATGGAGATACTGTCTTGCTTGATGGTATTATGAGCTGGTTATCCGTTCATGATGTGGAAACTATTGAT GCTTCTACAAGCCAGCCAACGACACCCGCAAAAAGTTATATTGTAAAACAAGGTGATACACTTAGTGGCATTGCATCAAA CTGGGGTACAAACTGGCAAGAATTGGCTCATCAGAACAGTTTATCTAACCCGAACATGATTTATGCAGGTCAGGTTATTC ACTTCACAGACGGTCAATATGGGGCTACAGCACGAACTTACACTGTACAATCTGATGATAATCTTTCATCAATTGCGAGC CGTTTAGGAACAACAGTTCAAAGCTTAGTTTCAATGAATGGCATCTCAAATCCTAATTTGATTTATGCTGGTCAAACTTT AAATTATTAA
Upstream 100 bases:
>100_bases CTATCATTACTTTGAATGCATTCACGGTATTCTTGGGAACATTAGCTGGAGTAAGTGCTGTTAAATATAATAACCAGCCA AATGATACGGAGGACAATAA
Downstream 100 bases:
>100_bases AATTAAAACCCGCTTCGGCGGGTGTTTTTTTAAATATAATTTATTCAAATAACATTTTTTATTGACAAGTAGCAAAATAT TTTGTTATAATATCTTTATC
Product: endolysin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKKVIKKAAIGMVAFFVVAASGPVFAAVGDQGVDWSKYNGDYGNFGYAHDKFAFSQIGGTYGGTFVDQATYETQVASAIA QGKRAHTYIWYQVGGSQEVAKAALDRYLPRIQTPKNSIVALDYEGGASGDKQANTDAILYGMRRVKAAGYTPMYYSYKPY TLANVNYNQIIKEFPNSLWIAAYPNYEVTPVPNYSFFPSMDGILVFQFTSTYVAGGLDGNVDLTGITDNGYGKQKGQEVK PNTATPAIENGKEANEVKGNDVEVGMTVKVNFGAKNYATGETIPQWVKGQPHKIIQKNGDTVLLDGIMSWLSVHDVETID ASTSQPTTPAKSYIVKQGDTLSGIASNWGTNWQELAHQNSLSNPNMIYAGQVIHFTDGQYGATARTYTVQSDDNLSSIAS RLGTTVQSLVSMNGISNPNLIYAGQTLNY
Sequences:
>Translated_429_residues MKKVIKKAAIGMVAFFVVAASGPVFAAVGDQGVDWSKYNGDYGNFGYAHDKFAFSQIGGTYGGTFVDQATYETQVASAIA QGKRAHTYIWYQVGGSQEVAKAALDRYLPRIQTPKNSIVALDYEGGASGDKQANTDAILYGMRRVKAAGYTPMYYSYKPY TLANVNYNQIIKEFPNSLWIAAYPNYEVTPVPNYSFFPSMDGILVFQFTSTYVAGGLDGNVDLTGITDNGYGKQKGQEVK PNTATPAIENGKEANEVKGNDVEVGMTVKVNFGAKNYATGETIPQWVKGQPHKIIQKNGDTVLLDGIMSWLSVHDVETID ASTSQPTTPAKSYIVKQGDTLSGIASNWGTNWQELAHQNSLSNPNMIYAGQVIHFTDGQYGATARTYTVQSDDNLSSIAS RLGTTVQSLVSMNGISNPNLIYAGQTLNY >Mature_429_residues MKKVIKKAAIGMVAFFVVAASGPVFAAVGDQGVDWSKYNGDYGNFGYAHDKFAFSQIGGTYGGTFVDQATYETQVASAIA QGKRAHTYIWYQVGGSQEVAKAALDRYLPRIQTPKNSIVALDYEGGASGDKQANTDAILYGMRRVKAAGYTPMYYSYKPY TLANVNYNQIIKEFPNSLWIAAYPNYEVTPVPNYSFFPSMDGILVFQFTSTYVAGGLDGNVDLTGITDNGYGKQKGQEVK PNTATPAIENGKEANEVKGNDVEVGMTVKVNFGAKNYATGETIPQWVKGQPHKIIQKNGDTVLLDGIMSWLSVHDVETID ASTSQPTTPAKSYIVKQGDTLSGIASNWGTNWQELAHQNSLSNPNMIYAGQVIHFTDGQYGATARTYTVQSDDNLSSIAS RLGTTVQSLVSMNGISNPNLIYAGQTLNY
Specific function: Peptidoglycan hydrolase involved in the splitting of the septum during cell division [H]
COG id: COG3757
COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Gene ontology:
Cell location: Secreted. Cell surface (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C51 domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007921 - InterPro: IPR018392 - InterPro: IPR002482 [H]
Pfam domain/function: PF05257 CHAP; PF01476 LysM [H]
EC number: =3.5.1.28 [H]
Molecular weight: Translated: 46498; Mature: 46498
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVIKKAAIGMVAFFVVAASGPVFAAVGDQGVDWSKYNGDYGNFGYAHDKFAFSQIGGT CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC YGGTFVDQATYETQVASAIAQGKRAHTYIWYQVGGSQEVAKAALDRYLPRIQTPKNSIVA CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEE LDYEGGASGDKQANTDAILYGMRRVKAAGYTPMYYSYKPYTLANVNYNQIIKEFPNSLWI EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCHHHHHHHCCCCEEE AAYPNYEVTPVPNYSFFPSMDGILVFQFTSTYVAGGLDGNVDLTGITDNGYGKQKGQEVK EECCCCEECCCCCCCCCCCCCCEEEEEEECCEEECCCCCCEEEEEEECCCCCCCCCCCCC PNTATPAIENGKEANEVKGNDVEVGMTVKVNFGAKNYATGETIPQWVKGQPHKIIQKNGD CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHCCCC TVLLDGIMSWLSVHDVETIDASTSQPTTPAKSYIVKQGDTLSGIASNWGTNWQELAHQNS EEEHHHHHHHHHHCCCEEECCCCCCCCCCHHHHEEECCCCHHHHHHHCCCCHHHHHHHCC LSNPNMIYAGQVIHFTDGQYGATARTYTVQSDDNLSSIASRLGTTVQSLVSMNGISNPNL CCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCE IYAGQTLNY EEECCCCCC >Mature Secondary Structure MKKVIKKAAIGMVAFFVVAASGPVFAAVGDQGVDWSKYNGDYGNFGYAHDKFAFSQIGGT CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC YGGTFVDQATYETQVASAIAQGKRAHTYIWYQVGGSQEVAKAALDRYLPRIQTPKNSIVA CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEE LDYEGGASGDKQANTDAILYGMRRVKAAGYTPMYYSYKPYTLANVNYNQIIKEFPNSLWI EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCHHHHHHHCCCCEEE AAYPNYEVTPVPNYSFFPSMDGILVFQFTSTYVAGGLDGNVDLTGITDNGYGKQKGQEVK EECCCCEECCCCCCCCCCCCCCEEEEEEECCEEECCCCCCEEEEEEECCCCCCCCCCCCC PNTATPAIENGKEANEVKGNDVEVGMTVKVNFGAKNYATGETIPQWVKGQPHKIIQKNGD CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHCCCC TVLLDGIMSWLSVHDVETIDASTSQPTTPAKSYIVKQGDTLSGIASNWGTNWQELAHQNS EEEHHHHHHHHHHCCCEEECCCCCCCCCCHHHHEEECCCCHHHHHHHCCCCHHHHHHHCC LSNPNMIYAGQVIHFTDGQYGATARTYTVQSDDNLSSIASRLGTTVQSLVSMNGISNPNL CCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCE IYAGQTLNY EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA