Click here to switch to the map view.

The map label for this gene is ps333

Identifier: 125623673

GI number: 125623673

Start: 797030

End: 797542

Strand: Direct

Name: ps333

Synonym: llmg_0824

Alternate gene names: NA

Gene position: 797030-797542 (Clockwise)

Preceding gene: 125623672

Following gene: 125623674

Centisome position: 31.51

GC content: 36.45

Gene sequence:

>513_bases
ATGAAACTTACTGAAAAACAGAAGAAGTTTGCAGATTATTATATCGAATCAGGTAACGCAACTCAGGCGGCTATAAAAGC
GGGGTATAGTAAGAAAACAGCATACAAAATCGGTGCTGAAAACCTCAGAAAACCTCAGATTAAAAAATACATTGATGAAC
GAATGGAACAGCTCGCTTCTGAGCGTATTATGAGCGCACAGGAGATACTTGAAAGGCTTAGCCTTATAGCTAATGCAAAA
ATAAAAGAAACGGTTGTAGTAGCCAATGCAGAGGGTTATTCGGAAGTTGAGAAACCTCCTGACTTTAAGGTTCAAATACA
AGCGATGAAGGAACTTCTTAAACGTTATCCTGGTAATGATAAATTACTTGAACAAACTCTTCGAAAACTTACTGCAGAAG
CTGATATTGCTGAATTCAAAGCTACAATGATACAATCTGCAACTGATAAATCAACTGAAGAAAAATTGGATGAATTGCTT
GGTAAGATTAGTGAGGTTATAGATGATAAGTGA

Upstream 100 bases:

>100_bases
TTATAGAGTTCGCGACTCTATCTTGCTATTATATTTTATTATAGGTTGTCCAATGGGCAGCCTTTTATTGTTGGATTCAC
AAATAAGATAGGAGGGAGGT

Downstream 100 bases:

>100_bases
TATTTATAGCAAAAAACAAATCGATGTTTTAAAGCAAACAGTAAATAAAGATTGGTTCATTGCTTTACTTCATGGTGCTA
AGCGTTCAGGTAAAACAAAG

Product: terminase small subunit

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Prophage; Prophage Lp2 Protein; Small Terminase; Phage Terminase Family Protein; Terminase Subunit; Terminase Superantigen-Encoding Pathogenicity Islands SaPI; Phage-Related Terminase Small Subunit; Terminase Small Subunit G1p; Bacteriophage Terminase Small Subunit

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKLTEKQKKFADYYIESGNATQAAIKAGYSKKTAYKIGAENLRKPQIKKYIDERMEQLASERIMSAQEILERLSLIANAK
IKETVVVANAEGYSEVEKPPDFKVQIQAMKELLKRYPGNDKLLEQTLRKLTAEADIAEFKATMIQSATDKSTEEKLDELL
GKISEVIDDK

Sequences:

>Translated_170_residues
MKLTEKQKKFADYYIESGNATQAAIKAGYSKKTAYKIGAENLRKPQIKKYIDERMEQLASERIMSAQEILERLSLIANAK
IKETVVVANAEGYSEVEKPPDFKVQIQAMKELLKRYPGNDKLLEQTLRKLTAEADIAEFKATMIQSATDKSTEEKLDELL
GKISEVIDDK
>Mature_170_residues
MKLTEKQKKFADYYIESGNATQAAIKAGYSKKTAYKIGAENLRKPQIKKYIDERMEQLASERIMSAQEILERLSLIANAK
IKETVVVANAEGYSEVEKPPDFKVQIQAMKELLKRYPGNDKLLEQTLRKLTAEADIAEFKATMIQSATDKSTEEKLDELL
GKISEVIDDK

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19264; Mature: 19264

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTEKQKKFADYYIESGNATQAAIKAGYSKKTAYKIGAENLRKPQIKKYIDERMEQLAS
CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCHHHCCCHHHHHHHHHHHHHHHH
ERIMSAQEILERLSLIANAKIKETVVVANAEGYSEVEKPPDFKVQIQAMKELLKRYPGND
HHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCHHHCCCCCCEEEHHHHHHHHHHCCCCH
KLLEQTLRKLTAEADIAEFKATMIQSATDKSTEEKLDELLGKISEVIDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLTEKQKKFADYYIESGNATQAAIKAGYSKKTAYKIGAENLRKPQIKKYIDERMEQLAS
CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCHHHCCCHHHHHHHHHHHHHHHH
ERIMSAQEILERLSLIANAKIKETVVVANAEGYSEVEKPPDFKVQIQAMKELLKRYPGND
HHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCHHHCCCCCCEEEHHHHHHHHHHCCCCH
KLLEQTLRKLTAEADIAEFKATMIQSATDKSTEEKLDELLGKISEVIDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA