Click here to switch to the map view.

The map label for this gene is ypjC [H]

Identifier: 125623580

GI number: 125623580

Start: 708350

End: 709045

Strand: Direct

Name: ypjC [H]

Synonym: llmg_0725

Alternate gene names: 125623580

Gene position: 708350-709045 (Clockwise)

Preceding gene: 125623577

Following gene: 125623586

Centisome position: 28.0

GC content: 36.35

Gene sequence:

>696_bases
ATGACTTTAATCGGAGTAAAAATTGATCGACTATTTCTCAGAGACTTATTCATACTACTCATTGGTGTAGGACTTTATAT
TTTATCCATTCAACTATTTGTTGTTCCTAATGCTATGGCAAGCAATGGAATTGCAGGATTTTCAGTCTTTATTCATTTTG
TTTTTGGTCTCAATCCAGCCTTGACCTTTTTTGCGGTCAATATTCCATTGTTTCTTGTCAGTTGGAAATTACTTGAACAA
AGAGAATTATTACTGACCATCCCAGGAGCATTAGCTATGAGCGGTTGGATGATGATATATGAGGCTATTGGAATTACAGG
CTTTCAAATGGACTCATTAATTGCTGTAGGGGTGATTGATGGAATTCTTTCAGGGATTGGAGCAGGCTTGGTTGTCTTAT
CACAGGGGACATTTGGTGGCTCTATTCTCTTAGCTCGACTTTTTGAAAACAAATGGAAAATATCTATTGATAAGACATTA
TTTGGGATTGATATTGTTGTGATGTTATTAGCACTTGTAACTTATCTGGCCCTTCCAAACTTTTTTGTGACACTCCTATC
TTGTTTTATTTTTAGTAAAGTGACACGATTCATCGGACGTCCTTCTTATCGTCAGCAAGTTCTTGAAAAATTTGGATTAA
GAAAAAGAGAAAGAAATTGCACTTGCGCGACAAGTGACTGCTCATGTCCCAACTAA

Upstream 100 bases:

>100_bases
GTAGATAATAAATTTTGATTCCAAAGAGGGATATGGTTTATAGATTAATTATAAAAATGTTATCATTAGATTATAAGAAA
AAACTAATAAAAGAGGTAAG

Downstream 100 bases:

>100_bases
TAAAAAAATCCCCAAACAGGGATTTTATTTTTTTTTCTTTCTTTTAAAAGCATTTTTAAAAGTCCCAAGGAAACTTGGCG
ATTTAACCACTTTTTCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTLIGVKIDRLFLRDLFILLIGVGLYILSIQLFVVPNAMASNGIAGFSVFIHFVFGLNPALTFFAVNIPLFLVSWKLLEQ
RELLLTIPGALAMSGWMMIYEAIGITGFQMDSLIAVGVIDGILSGIGAGLVVLSQGTFGGSILLARLFENKWKISIDKTL
FGIDIVVMLLALVTYLALPNFFVTLLSCFIFSKVTRFIGRPSYRQQVLEKFGLRKRERNCTCATSDCSCPN

Sequences:

>Translated_231_residues
MTLIGVKIDRLFLRDLFILLIGVGLYILSIQLFVVPNAMASNGIAGFSVFIHFVFGLNPALTFFAVNIPLFLVSWKLLEQ
RELLLTIPGALAMSGWMMIYEAIGITGFQMDSLIAVGVIDGILSGIGAGLVVLSQGTFGGSILLARLFENKWKISIDKTL
FGIDIVVMLLALVTYLALPNFFVTLLSCFIFSKVTRFIGRPSYRQQVLEKFGLRKRERNCTCATSDCSCPN
>Mature_230_residues
TLIGVKIDRLFLRDLFILLIGVGLYILSIQLFVVPNAMASNGIAGFSVFIHFVFGLNPALTFFAVNIPLFLVSWKLLEQR
ELLLTIPGALAMSGWMMIYEAIGITGFQMDSLIAVGVIDGILSGIGAGLVVLSQGTFGGSILLARLFENKWKISIDKTLF
GIDIVVMLLALVTYLALPNFFVTLLSCFIFSKVTRFIGRPSYRQQVLEKFGLRKRERNCTCATSDCSCPN

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 25459; Mature: 25328

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIGVKIDRLFLRDLFILLIGVGLYILSIQLFVVPNAMASNGIAGFSVFIHFVFGLNPA
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHCCCHHHHHHHHHHHCCCHH
LTFFAVNIPLFLVSWKLLEQRELLLTIPGALAMSGWMMIYEAIGITGFQMDSLIAVGVID
HHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GILSGIGAGLVVLSQGTFGGSILLARLFENKWKISIDKTLFGIDIVVMLLALVTYLALPN
HHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
FFVTLLSCFIFSKVTRFIGRPSYRQQVLEKFGLRKRERNCTCATSDCSCPN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCEECCCCCCCC
>Mature Secondary Structure 
TLIGVKIDRLFLRDLFILLIGVGLYILSIQLFVVPNAMASNGIAGFSVFIHFVFGLNPA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHCCCHHHHHHHHHHHCCCHH
LTFFAVNIPLFLVSWKLLEQRELLLTIPGALAMSGWMMIYEAIGITGFQMDSLIAVGVID
HHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GILSGIGAGLVVLSQGTFGGSILLARLFENKWKISIDKTLFGIDIVVMLLALVTYLALPN
HHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
FFVTLLSCFIFSKVTRFIGRPSYRQQVLEKFGLRKRERNCTCATSDCSCPN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]