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The map label for this gene is oppA

Identifier: 125623557

GI number: 125623557

Start: 687458

End: 689260

Strand: Direct

Name: oppA

Synonym: llmg_0701

Alternate gene names: 125623557

Gene position: 687458-689260 (Clockwise)

Preceding gene: 125623556

Following gene: 125623558

Centisome position: 27.18

GC content: 36.88

Gene sequence:

>1803_bases
ATGAACAAATTAAAAGTAACTTTATTGGCAAGTAGTGTAGTTTTAGCAGCTACACTCCTAAGTGCTTGTGGTTCTAATCA
AAGCTCAAGTACAAGTACAAAAAAATTAAAAGCGGGGAACTTTGACGTTGCTTATCAAAATCCAGACAAGGCAATCAAAG
GTGGAAATTTAAAAGTCGCATATCAAAGTGATTCTCCAATGAAAGCACAATGGTTATCGGGACTTTCTAATGATGCAACT
TTTGCTACAATGTCTGGTCCTGGTGGAGGTCAAGATGGTTTGTTCTTCACAGACAGTGGATTCAAATTTATTAAGGGAGG
AGCTGCCGATGTTGCTCTAGATAAAGAGTCTAAAACGGCAACGATTACCCTTCGTAAAGATTTGAAATGGTCTGATGGTT
CAGAAGTAACGGCTAAAGATTATGAATTTACCTATGAAACGATTGCTAATCCTGCTTATGGTTCCGACCGTTGGACTGAT
TCTCTGGCAAATATTGTTGGCTTGAGTGATTATCATACGGGTAAAGCTAAAACAATCTCAGGGATCACTTTCCCTGATGG
TGAAAATGGAAAAGTCATCAAGGTTCAATTTAAAGAAATGAAACCGGGGATGACTCAATCAGGAAATGGTTACTTCCTTG
AAACGGTAGCGCCTTATCAATATTTGAAAGATGTCGCTCCTAAAGATTTGGCTTCTAGTCCAAAAACGACAACGAAACCA
TTAGTTACAGGGCCTTTTAAACCGGAAAATGTTGTTGCTGGTGAATCTATTAAATATGTCCCAAATCCTTACTATTGGGG
TGAAAAACCAAAACTAAATTCAATTACTTATGAAGTTGTATCAACAGCAAAATCAGTCGCAGCACTTTCATCAAGTAAAT
ATGATATTATTAACGGCATGGTTAGTAGCCAGTATAAGCAAGTGAAAAACTTAAAGGGATACAAGGTTTTAGGACAACAA
GCGATGTATATTTCCTTAATGTACTATAACTTAGGGCACTATGATGCTAAAAATTCAATTAATGTCCAAGATCGTAAAAC
GCCATTGCAAGACCAAAATGTTCGTCAAGCCATTGGTTATGCTCGAAATGTCGCAGAAGTGGATAATAAGTTCTCAAACG
GACTTTCAACTCCTGCAAATAGTTTGATTCCACCTATCTTTAAACAATTTACGAGTTCATCAGTTAAAGGATATGAAAAA
CAAGATCTTGATAAAGCTAATAAACTTTTGGATGAAGACGGATGGAAATTGAATAAATCTACAGGCTACCGTGAAAAAGA
TGGAAAAGAATTATCGCTTGTTTATGCGGCTCGTGTAGGTGATGCAAACGCTGAAACCATTGCCCAAAACTATATCCAAC
AATGGAAGAAAATTGGGGTAAAAGTGAGTCTTTATAACGGTAAATTGATGGAATTTAATTCTTGGGTCGACCATATGACG
ACTCCTCCAGGAGCAAATGACTGGGATATCACTGACGGTTCTTGGTCATTGGCATCTGAACCTTCTCAACAAGATTTGTT
CTCAGCAGCAGCACCTTATAACTTTGGTCACTTTAATGATTCAGAAATTACTAAGGATTTAAATGATATTGATTCTGCCA
AGTCTGAAAATCCAACTTACCGTAAAGCAGCTTTCGTTAAATATCAAGAAGATATGAATAAAAAAGCTTATGTGATTCCA
ACTAACTTTATGTTGAATTATACTCCTGTTAACAAACGTGTAGTTGGAATGACGCTTGATTATGGTGCAATGAATACTTG
GTCAGAAATTGGTGTTTCTTCTGCTAAGTTGGCCACCAAATAG

Upstream 100 bases:

>100_bases
AAGAGTGATAAAAATGTTTATCTATTAAAAATGGATATGATAAATTAAATATTATATTGAAGCAAGCAAGAAATAAAAAG
AAATTATTGGAGAAACTAAG

Downstream 100 bases:

>100_bases
TTTTACTTAACTTTTGTTTACAAGTTTTTTTGTAAAAATACCCTCACTTTAGTTTTCGCAATTCTAAAGTCACAGAAGTT
CAAATTTATGATTTGAGCTT

Product: oligopeptide-binding protein oppA precursor

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MNKLKVTLLASSVVLAATLLSACGSNQSSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKVAYQSDSPMKAQWLSGLSNDAT
FATMSGPGGGQDGLFFTDSGFKFIKGGAADVALDKESKTATITLRKDLKWSDGSEVTAKDYEFTYETIANPAYGSDRWTD
SLANIVGLSDYHTGKAKTISGITFPDGENGKVIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASSPKTTTKP
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEVVSTAKSVAALSSSKYDIINGMVSSQYKQVKNLKGYKVLGQQ
AMYISLMYYNLGHYDAKNSINVQDRKTPLQDQNVRQAIGYARNVAEVDNKFSNGLSTPANSLIPPIFKQFTSSSVKGYEK
QDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVYAARVGDANAETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
TPPGANDWDITDGSWSLASEPSQQDLFSAAAPYNFGHFNDSEITKDLNDIDSAKSENPTYRKAAFVKYQEDMNKKAYVIP
TNFMLNYTPVNKRVVGMTLDYGAMNTWSEIGVSSAKLATK

Sequences:

>Translated_600_residues
MNKLKVTLLASSVVLAATLLSACGSNQSSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKVAYQSDSPMKAQWLSGLSNDAT
FATMSGPGGGQDGLFFTDSGFKFIKGGAADVALDKESKTATITLRKDLKWSDGSEVTAKDYEFTYETIANPAYGSDRWTD
SLANIVGLSDYHTGKAKTISGITFPDGENGKVIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASSPKTTTKP
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEVVSTAKSVAALSSSKYDIINGMVSSQYKQVKNLKGYKVLGQQ
AMYISLMYYNLGHYDAKNSINVQDRKTPLQDQNVRQAIGYARNVAEVDNKFSNGLSTPANSLIPPIFKQFTSSSVKGYEK
QDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVYAARVGDANAETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
TPPGANDWDITDGSWSLASEPSQQDLFSAAAPYNFGHFNDSEITKDLNDIDSAKSENPTYRKAAFVKYQEDMNKKAYVIP
TNFMLNYTPVNKRVVGMTLDYGAMNTWSEIGVSSAKLATK
>Mature_600_residues
MNKLKVTLLASSVVLAATLLSACGSNQSSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKVAYQSDSPMKAQWLSGLSNDAT
FATMSGPGGGQDGLFFTDSGFKFIKGGAADVALDKESKTATITLRKDLKWSDGSEVTAKDYEFTYETIANPAYGSDRWTD
SLANIVGLSDYHTGKAKTISGITFPDGENGKVIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASSPKTTTKP
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEVVSTAKSVAALSSSKYDIINGMVSSQYKQVKNLKGYKVLGQQ
AMYISLMYYNLGHYDAKNSINVQDRKTPLQDQNVRQAIGYARNVAEVDNKFSNGLSTPANSLIPPIFKQFTSSSVKGYEK
QDLDKANKLLDEDGWKLNKSTGYREKDGKELSLVYAARVGDANAETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
TPPGANDWDITDGSWSLASEPSQQDLFSAAAPYNFGHFNDSEITKDLNDIDSAKSENPTYRKAAFVKYQEDMNKKAYVIP
TNFMLNYTPVNKRVVGMTLDYGAMNTWSEIGVSSAKLATK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family

Homologues:

Organism=Escherichia coli, GI1789966, Length=384, Percent_Identity=23.4375, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787495, Length=491, Percent_Identity=23.4215885947047, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): OPPA2_LACLA (Q07741)

Other databases:

- EMBL:   L18760
- PIR:   E53290
- ProteinModelPortal:   Q07741
- SMR:   Q07741
- InterPro:   IPR000914

Pfam domain/function: PF00496 SBP_bac_5

EC number: NA

Molecular weight: Translated: 65842; Mature: 65842

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS01040 SBP_BACTERIAL_5; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLKVTLLASSVVLAATLLSACGSNQSSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKVA
CCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCEEEEEECCCHHCCCCCEEEE
YQSDSPMKAQWLSGLSNDATFATMSGPGGGQDGLFFTDSGFKFIKGGAADVALDKESKTA
ECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCEEEECCCCEEEECCCCCEE
TITLRKDLKWSDGSEVTAKDYEFTYETIANPAYGSDRWTDSLANIVGLSDYHTGKAKTIS
EEEEEECCCCCCCCCEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE
GITFPDGENGKVIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASSPKTTTKP
CEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHCCCCCCCCCC
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEVVSTAKSVAALSSSKYDIINGM
EEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
VSSQYKQVKNLKGYKVLGQQAMYISLMYYNLGHYDAKNSINVQDRKTPLQDQNVRQAIGY
HHHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ARNVAEVDNKFSNGLSTPANSLIPPIFKQFTSSSVKGYEKQDLDKANKLLDEDGWKLNKS
HHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCC
TGYREKDGKELSLVYAARVGDANAETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCEEEEHHHHHHHCC
TPPGANDWDITDGSWSLASEPSQQDLFSAAAPYNFGHFNDSEITKDLNDIDSAKSENPTY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
RKAAFVKYQEDMNKKAYVIPTNFMLNYTPVNKRVVGMTLDYGAMNTWSEIGVSSAKLATK
HHHEEEEEHHCCCCEEEEEECCEEEEECCCCCEEEEEEECCCCCCCHHHHCCCCHHHCCC
>Mature Secondary Structure
MNKLKVTLLASSVVLAATLLSACGSNQSSSTSTKKLKAGNFDVAYQNPDKAIKGGNLKVA
CCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCEEEEEECCCHHCCCCCEEEE
YQSDSPMKAQWLSGLSNDATFATMSGPGGGQDGLFFTDSGFKFIKGGAADVALDKESKTA
ECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCEEEECCCCEEEECCCCCEE
TITLRKDLKWSDGSEVTAKDYEFTYETIANPAYGSDRWTDSLANIVGLSDYHTGKAKTIS
EEEEEECCCCCCCCCEEECCCEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEE
GITFPDGENGKVIKVQFKEMKPGMTQSGNGYFLETVAPYQYLKDVAPKDLASSPKTTTKP
CEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCHHHCCCCCCCCCC
LVTGPFKPENVVAGESIKYVPNPYYWGEKPKLNSITYEVVSTAKSVAALSSSKYDIINGM
EEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
VSSQYKQVKNLKGYKVLGQQAMYISLMYYNLGHYDAKNSINVQDRKTPLQDQNVRQAIGY
HHHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ARNVAEVDNKFSNGLSTPANSLIPPIFKQFTSSSVKGYEKQDLDKANKLLDEDGWKLNKS
HHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCC
TGYREKDGKELSLVYAARVGDANAETIAQNYIQQWKKIGVKVSLYNGKLMEFNSWVDHMT
CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCEEEEHHHHHHHCC
TPPGANDWDITDGSWSLASEPSQQDLFSAAAPYNFGHFNDSEITKDLNDIDSAKSENPTY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
RKAAFVKYQEDMNKKAYVIPTNFMLNYTPVNKRVVGMTLDYGAMNTWSEIGVSSAKLATK
HHHEEEEEHHCCCCEEEEEECCEEEEECCCCCEEEEEEECCCCCCCHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8244921