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The map label for this gene is yqjQ [H]

Identifier: 125623466

GI number: 125623466

Start: 592616

End: 593365

Strand: Direct

Name: yqjQ [H]

Synonym: llmg_0605

Alternate gene names: 125623466

Gene position: 592616-593365 (Clockwise)

Preceding gene: 125623465

Following gene: 125623467

Centisome position: 23.43

GC content: 34.53

Gene sequence:

>750_bases
ATGTTCACGCGAATACCTTTGTGGCCAAAGATTTATACGAGGAAAAAATTGGTTAAAAATATTGTAATTACAGGTGCAAC
TGGTGATATTGCAAAAGAAATTGTCAGCTTATTATCTAAAACAAATGACCATTTGATTTTGGTATCACGAAGTCGTACGG
CTTTAGAGAAATTGTATGGGCAGTTAGCAAATGTCACTTTACTGACCAATGATGAACTTTTAACTGCTGAGCAATCTTAT
GATGTGGATATTTTAATTAATAATGCTGGCTTTGGTATTTTTAAAGATTTTACTGAACTGACAGACTCTGAGATTACTGA
GCAATTTGTTATTAATACATTGATGCCCATTCAGCTGACAAGACAGTTAAAACCAAGACTTCAGCTGATTAACATTGCTT
CTATTGCTGGGAAATTACCGACAAGAAAATCAAGTATTTATGCTGCCAGTAAAGCAGCATTAATTACTTTTTCGGATGCC
CTACGCATGGAAAATCCACAATTGATTGTGACCACTGTGAATACTGGTCCAGTTCGGACCAAATTTCACAAGAATAATGG
AGATTATCTTAATAAAGTGGATAAAAGTGCTATTTCTGCCGCTAAAGTTGCTGACAAAATTGTGAATAACTTCGGGAAAA
GAAAAAGAGAACTAAATTTACCGTGGACTTTATCCACAGCTGCCAAACTTCGCAGTCTTTTTCCCTCACTGGTTGATTTT
TTATCAACAAGATTTTTTAATTTTAAATAG

Upstream 100 bases:

>100_bases
GATGTTGCTAAGGAAGCAGGCGTCAATCGTTTATTATTGACCCATATTAGTGCACGTTATGTTGGTCCTTTGGTAGGGCA
ATTGGTTCGTGAAGCGCAAG

Downstream 100 bases:

>100_bases
TATTCTACTGACAGTTTTTTATAGAAGTGGTTCATTCTTCTGTCAGTAAAAAAATAGCAGTCATTTGCGATAAAGAAGAC
TAAAACTTATCTTGCTTTGC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MFTRIPLWPKIYTRKKLVKNIVITGATGDIAKEIVSLLSKTNDHLILVSRSRTALEKLYGQLANVTLLTNDELLTAEQSY
DVDILINNAGFGIFKDFTELTDSEITEQFVINTLMPIQLTRQLKPRLQLINIASIAGKLPTRKSSIYAASKAALITFSDA
LRMENPQLIVTTVNTGPVRTKFHKNNGDYLNKVDKSAISAAKVADKIVNNFGKRKRELNLPWTLSTAAKLRSLFPSLVDF
LSTRFFNFK

Sequences:

>Translated_249_residues
MFTRIPLWPKIYTRKKLVKNIVITGATGDIAKEIVSLLSKTNDHLILVSRSRTALEKLYGQLANVTLLTNDELLTAEQSY
DVDILINNAGFGIFKDFTELTDSEITEQFVINTLMPIQLTRQLKPRLQLINIASIAGKLPTRKSSIYAASKAALITFSDA
LRMENPQLIVTTVNTGPVRTKFHKNNGDYLNKVDKSAISAAKVADKIVNNFGKRKRELNLPWTLSTAAKLRSLFPSLVDF
LSTRFFNFK
>Mature_249_residues
MFTRIPLWPKIYTRKKLVKNIVITGATGDIAKEIVSLLSKTNDHLILVSRSRTALEKLYGQLANVTLLTNDELLTAEQSY
DVDILINNAGFGIFKDFTELTDSEITEQFVINTLMPIQLTRQLKPRLQLINIASIAGKLPTRKSSIYAASKAALITFSDA
LRMENPQLIVTTVNTGPVRTKFHKNNGDYLNKVDKSAISAAKVADKIVNNFGKRKRELNLPWTLSTAAKLRSLFPSLVDF
LSTRFFNFK

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=275, Percent_Identity=31.6363636363636, Blast_Score=83, Evalue=2e-16,
Organism=Escherichia coli, GI1786701, Length=256, Percent_Identity=28.90625, Blast_Score=87, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71997402, Length=256, Percent_Identity=27.734375, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17570069, Length=264, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323882, Length=225, Percent_Identity=31.1111111111111, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21358495, Length=253, Percent_Identity=26.4822134387352, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24643142, Length=183, Percent_Identity=31.1475409836066, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27947; Mature: 27947

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTRIPLWPKIYTRKKLVKNIVITGATGDIAKEIVSLLSKTNDHLILVSRSRTALEKLYG
CCCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH
QLANVTLLTNDELLTAEQSYDVDILINNAGFGIFKDFTELTDSEITEQFVINTLMPIQLT
HHHCEEEEECCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLKPRLQLINIASIAGKLPTRKSSIYAASKAALITFSDALRMENPQLIVTTVNTGPVRT
HHHCCHHHHHHHHHHHCCCCCCCCHHHECCCEEEEEEHHHHCCCCCEEEEEEECCCCCEE
KFHKNNGDYLNKVDKSAISAAKVADKIVNNFGKRKRELNLPWTLSTAAKLRSLFPSLVDF
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
LSTRFFNFK
HHHHCCCCC
>Mature Secondary Structure
MFTRIPLWPKIYTRKKLVKNIVITGATGDIAKEIVSLLSKTNDHLILVSRSRTALEKLYG
CCCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH
QLANVTLLTNDELLTAEQSYDVDILINNAGFGIFKDFTELTDSEITEQFVINTLMPIQLT
HHHCEEEEECCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLKPRLQLINIASIAGKLPTRKSSIYAASKAALITFSDALRMENPQLIVTTVNTGPVRT
HHHCCHHHHHHHHHHHCCCCCCCCHHHECCCEEEEEEHHHHCCCCCEEEEEEECCCCCEE
KFHKNNGDYLNKVDKSAISAAKVADKIVNNFGKRKRELNLPWTLSTAAKLRSLFPSLVDF
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
LSTRFFNFK
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]