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The map label for this gene is 125623389

Identifier: 125623389

GI number: 125623389

Start: 521309

End: 522052

Strand: Direct

Name: 125623389

Synonym: llmg_0522

Alternate gene names: NA

Gene position: 521309-522052 (Clockwise)

Preceding gene: 125623388

Following gene: 125623390

Centisome position: 20.61

GC content: 33.74

Gene sequence:

>744_bases
ATGAATCATTTAACCAGTGTGGAAATTTATATTTGGAATTACTTAGAAGAAAATAAGACAAAAGTTATCCAAATGACAGT
TGCTCAGATTGCTGAATCTGCTCATGTTAGTTCTTCATCAATCATTCGAACTTTGAAAAAGAAAAATTTTTCTAGTTTTT
CTGAATACAAAAATACAGCAAAAATAAAAATGAATACAAATAAATGGATTCACGGCTTATCAGAAAGTGCCAATCAAGTT
GTCTCTGAAACGATAGAGGAATTGTTAAGAACGGTGAGGCTACTAGAGAGTGAAAACTTAGCTAAAGTCCTTGAAAATAT
TTATCAGGCAGATTCTGTCGTAGTTATCTCTCGTGGTTTATCAGTGAGAATAGCCGATTCATTTGCCAGAGATTTGCAAT
TTTTAGATGTCAAGGCGGTGAGCCTTTATCAGGATAATATGCAGAATTATCTTAGTAAATTGCCTGAAAATACTTTTCTT
GTTGGCCTGAGTTTGTCCGGTGAAACAGAATTGATTGTCGCGACAGCCCTCAAAGCAAAAAGAGAGGGTAAAAAAGTTTT
GGCTATTACCGGAAATTATGAAAGCAGATTAGCTCAACAAAGCGATTTATCTTTGTTTGCTTATCAAAAAAAGGCTTCTG
GAAAAATTCCAGTTGATTACAATAATATGCTTCCACTAGAACTTATTATTCACCTTTTGGTTCAACTTTATACAGAATAT
AAAGAACAGGGGAGGATTGTTTGA

Upstream 100 bases:

>100_bases
TAATTTAAAAACTTACTGATACAATTGTCAGTAAGTTTTTTTATATTTTTTTAGAAATTATAGTTACTAAGAGTCAACAA
TTTTTATCCAGAGGAGTTTT

Downstream 100 bases:

>100_bases
CTGTTAGAATTTTACTGACAGATTCTAGTAAAATATGGTCTGTCAGTAAATTTTTTATTATTTAAGAATAAATTCCTGAA
ATTATAGTAAAATCAGGAAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; RpiR Family Transcriptional Regulator; Transcription Regulator; HTH-Type Transcriptional Regulator; Transcriptional Regulator Rpir Family

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNHLTSVEIYIWNYLEENKTKVIQMTVAQIAESAHVSSSSIIRTLKKKNFSSFSEYKNTAKIKMNTNKWIHGLSESANQV
VSETIEELLRTVRLLESENLAKVLENIYQADSVVVISRGLSVRIADSFARDLQFLDVKAVSLYQDNMQNYLSKLPENTFL
VGLSLSGETELIVATALKAKREGKKVLAITGNYESRLAQQSDLSLFAYQKKASGKIPVDYNNMLPLELIIHLLVQLYTEY
KEQGRIV

Sequences:

>Translated_247_residues
MNHLTSVEIYIWNYLEENKTKVIQMTVAQIAESAHVSSSSIIRTLKKKNFSSFSEYKNTAKIKMNTNKWIHGLSESANQV
VSETIEELLRTVRLLESENLAKVLENIYQADSVVVISRGLSVRIADSFARDLQFLDVKAVSLYQDNMQNYLSKLPENTFL
VGLSLSGETELIVATALKAKREGKKVLAITGNYESRLAQQSDLSLFAYQKKASGKIPVDYNNMLPLELIIHLLVQLYTEY
KEQGRIV
>Mature_247_residues
MNHLTSVEIYIWNYLEENKTKVIQMTVAQIAESAHVSSSSIIRTLKKKNFSSFSEYKNTAKIKMNTNKWIHGLSESANQV
VSETIEELLRTVRLLESENLAKVLENIYQADSVVVISRGLSVRIADSFARDLQFLDVKAVSLYQDNMQNYLSKLPENTFL
VGLSLSGETELIVATALKAKREGKKVLAITGNYESRLAQQSDLSLFAYQKKASGKIPVDYNNMLPLELIIHLLVQLYTEY
KEQGRIV

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27969; Mature: 27969

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLTSVEIYIWNYLEENKTKVIQMTVAQIAESAHVSSSSIIRTLKKKNFSSFSEYKNTA
CCCCEEEEEEEEEEHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCE
KIKMNTNKWIHGLSESANQVVSETIEELLRTVRLLESENLAKVLENIYQADSVVVISRGL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCC
SVRIADSFARDLQFLDVKAVSLYQDNMQNYLSKLPENTFLVGLSLSGETELIVATALKAK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHH
REGKKVLAITGNYESRLAQQSDLSLFAYQKKASGKIPVDYNNMLPLELIIHLLVQLYTEY
HCCCEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KEQGRIV
HHCCCCC
>Mature Secondary Structure
MNHLTSVEIYIWNYLEENKTKVIQMTVAQIAESAHVSSSSIIRTLKKKNFSSFSEYKNTA
CCCCEEEEEEEEEEHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCE
KIKMNTNKWIHGLSESANQVVSETIEELLRTVRLLESENLAKVLENIYQADSVVVISRGL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCC
SVRIADSFARDLQFLDVKAVSLYQDNMQNYLSKLPENTFLVGLSLSGETELIVATALKAK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHH
REGKKVLAITGNYESRLAQQSDLSLFAYQKKASGKIPVDYNNMLPLELIIHLLVQLYTEY
HCCCEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KEQGRIV
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA