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The map label for this gene is ypmR [H]

Identifier: 125623360

GI number: 125623360

Start: 487449

End: 488288

Strand: Direct

Name: ypmR [H]

Synonym: llmg_0493

Alternate gene names: 125623360

Gene position: 487449-488288 (Clockwise)

Preceding gene: 125623359

Following gene: 125623361

Centisome position: 19.27

GC content: 36.55

Gene sequence:

>840_bases
ATGATGAAGAATTTTATACGTACATTTGCCGGCTTTTTGCTGGCAATTTTGCTAATTTTAGGCTTGTTTTTACTTGCTTT
TCCAAAAGCTGGTGACCGATTTAGAACTGAGAAGAAAGTATCGGCTTTGTCAGCAAAACATGTGTCCTATGCTGCTTTGG
GAGATTCACTGACAGAAGGAGTGGGGGATGCTACTGGACAAGGTGGTTTTGTTCCACTTTTTGCCAAAGAGATTGAAAAT
TCTACTGGCGGCTCTGTCAGTAGTCAAAATTTCGGAAAGGCTGGAGATACAAGTACTCAAATCTATAATCGCATGATGAA
AAGTAAGAAAATTACTGACGGACTTAAAAAAGCCAATATCATCACGATTACAATTGGAGGCAACGATGTACTAAAAGTCA
TTCGAGATAATGTGACTAAATTATCTTCAATGACTGAAAAGGACTTTGTTAAGCCAGAAGAGCTTTATCAGGCAAGAGTT
AAAAAGTTATTGGATAAAATTCGTGAAAATAATCCTCAAGCACAAATCTATGTCTTAGGAATTTATAATCCATTTTATCT
TAACTTTCCAGACCTTACTGTCATGCAAAATGTGATAGATAGTTGGAATACCGCAACTGCTGGTGTTGTCAGTCAAGAAA
AAAATACTTACTTTATTCCAATTAATAATTTACTTTATAAAGGCTCAGGAGATAAGCAGGCAGTTGAAGCGGATAGTTCA
ACGAGTGCGGTTGCTAATAACTTACTTTATACTGAAGACCATTTCCATCCAAATAATATCGGTTATCAAATTATGGCTGA
TGCAGTCTTTGCAAGCTATAAGGAGGTCAACCAGAAGTGA

Upstream 100 bases:

>100_bases
ACATACAGGTCCTGGGGCTTGGGCAATTATGATTGATTACGAATGAAAAAACTAATTTGCAATTTTATTTTTTGAAAAAC
TAGGGAGGATTGCAAAGAAT

Downstream 100 bases:

>100_bases
CCAAAAGATTAAAGAAACAAGCAAAACCAGTCGTTTTTCTAGGCCTTGTTATTGGTTGTGCACTTATTGTGTCAGGAGTT
CTTGGTCTGTCAGGACATTT

Product: putative esterase/lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MMKNFIRTFAGFLLAILLILGLFLLAFPKAGDRFRTEKKVSALSAKHVSYAALGDSLTEGVGDATGQGGFVPLFAKEIEN
STGGSVSSQNFGKAGDTSTQIYNRMMKSKKITDGLKKANIITITIGGNDVLKVIRDNVTKLSSMTEKDFVKPEELYQARV
KKLLDKIRENNPQAQIYVLGIYNPFYLNFPDLTVMQNVIDSWNTATAGVVSQEKNTYFIPINNLLYKGSGDKQAVEADSS
TSAVANNLLYTEDHFHPNNIGYQIMADAVFASYKEVNQK

Sequences:

>Translated_279_residues
MMKNFIRTFAGFLLAILLILGLFLLAFPKAGDRFRTEKKVSALSAKHVSYAALGDSLTEGVGDATGQGGFVPLFAKEIEN
STGGSVSSQNFGKAGDTSTQIYNRMMKSKKITDGLKKANIITITIGGNDVLKVIRDNVTKLSSMTEKDFVKPEELYQARV
KKLLDKIRENNPQAQIYVLGIYNPFYLNFPDLTVMQNVIDSWNTATAGVVSQEKNTYFIPINNLLYKGSGDKQAVEADSS
TSAVANNLLYTEDHFHPNNIGYQIMADAVFASYKEVNQK
>Mature_279_residues
MMKNFIRTFAGFLLAILLILGLFLLAFPKAGDRFRTEKKVSALSAKHVSYAALGDSLTEGVGDATGQGGFVPLFAKEIEN
STGGSVSSQNFGKAGDTSTQIYNRMMKSKKITDGLKKANIITITIGGNDVLKVIRDNVTKLSSMTEKDFVKPEELYQARV
KKLLDKIRENNPQAQIYVLGIYNPFYLNFPDLTVMQNVIDSWNTATAGVVSQEKNTYFIPINNLLYKGSGDKQAVEADSS
TSAVANNLLYTEDHFHPNNIGYQIMADAVFASYKEVNQK

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 30734; Mature: 30734

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNFIRTFAGFLLAILLILGLFLLAFPKAGDRFRTEKKVSALSAKHVSYAALGDSLTEG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGDATGQGGFVPLFAKEIENSTGGSVSSQNFGKAGDTSTQIYNRMMKSKKITDGLKKANI
CCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
ITITIGGNDVLKVIRDNVTKLSSMTEKDFVKPEELYQARVKKLLDKIRENNPQAQIYVLG
EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
IYNPFYLNFPDLTVMQNVIDSWNTATAGVVSQEKNTYFIPINNLLYKGSGDKQAVEADSS
ECCCEEECCCHHHHHHHHHHCCCCCHHCCEECCCCEEEEEECCEEECCCCCCHHCCCCCC
TSAVANNLLYTEDHFHPNNIGYQIMADAVFASYKEVNQK
HHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKNFIRTFAGFLLAILLILGLFLLAFPKAGDRFRTEKKVSALSAKHVSYAALGDSLTEG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGDATGQGGFVPLFAKEIENSTGGSVSSQNFGKAGDTSTQIYNRMMKSKKITDGLKKANI
CCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
ITITIGGNDVLKVIRDNVTKLSSMTEKDFVKPEELYQARVKKLLDKIRENNPQAQIYVLG
EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
IYNPFYLNFPDLTVMQNVIDSWNTATAGVVSQEKNTYFIPINNLLYKGSGDKQAVEADSS
ECCCEEECCCHHHHHHHHHHCCCCCHHCCEECCCCEEEEEECCEEECCCCCCHHCCCCCC
TSAVANNLLYTEDHFHPNNIGYQIMADAVFASYKEVNQK
HHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]