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The map label for this gene is ybbR [H]

Identifier: 125623317

GI number: 125623317

Start: 443980

End: 444633

Strand: Direct

Name: ybbR [H]

Synonym: llmg_0450

Alternate gene names: 125623317

Gene position: 443980-444633 (Clockwise)

Preceding gene: 125623316

Following gene: 125623318

Centisome position: 17.55

GC content: 35.78

Gene sequence:

>654_bases
TTGAAAACTGGTAAATTTGATGTTCCAATCAGAATTGAACAACTTCCAGGTGGGGTGACGGCAACAATTGAGCCTAAAAC
CATGAATATTATGGTGGAAGATAAAGCTAAAAAAGAATTTGAAGTGACCCCAAAAGCTGATTCAACTCAACTTCCAGAAG
GATTTACGATAGATAGTCTTACTGTTAGTGATGAAAAAGTTAAGGTTACCGCAGGAAATGAAAGTATTCAAAAAATCTAT
GCAATTGAAGCAGCTTTGCCAAATGATGTTAATTTAACAGAAAACTATTCAGGCACAGTAACTCTTCACGCCGTAGATAG
CGCAGGTAAAATTCTACCGGCACAAATTGAACCTTCAACAACACATTTAAAAGTTACAGTGAATAAGTTAACAAAAGACG
TTCCAGTTAAAATAACGCAAAAAGGAACGCTTGATAAGACTTTATCAGAAGTGAAAACGAAAATTTCTGATAAAAATGTT
ACTTTGTCGGGTGAAAAGAGTGCTTTAGATGCAATTAATAGTGTTGAAGGCACAGTAGATATTACAGGCATTGTGAAAGA
AACAAAAATAACAGTTCCCTTACATGCAGCAGGAGTAAGTTTAGATCCGCAAGAGGTTGAAGTTACTTTGACCCCGGTAA
AAATCGGTAGCTAA

Upstream 100 bases:

>100_bases
GCAGTGCAACAGTTCATTTATCAGGATATAATCGACTTTCAATTACCAATGAAGAAAACTCAGATACTAGAAATTTTTTT
TAAGTGTTGATTTAACTAAA

Downstream 100 bases:

>100_bases
TTTTTGATAACAGATAAAAAGAATAAAAAATGGAGACAATAAAAATGGGTAAATATTTTGGAACAGACGGTGTTCGCGGA
GAAGCAAATGTTGAATTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKTGKFDVPIRIEQLPGGVTATIEPKTMNIMVEDKAKKEFEVTPKADSTQLPEGFTIDSLTVSDEKVKVTAGNESIQKIY
AIEAALPNDVNLTENYSGTVTLHAVDSAGKILPAQIEPSTTHLKVTVNKLTKDVPVKITQKGTLDKTLSEVKTKISDKNV
TLSGEKSALDAINSVEGTVDITGIVKETKITVPLHAAGVSLDPQEVEVTLTPVKIGS

Sequences:

>Translated_217_residues
MKTGKFDVPIRIEQLPGGVTATIEPKTMNIMVEDKAKKEFEVTPKADSTQLPEGFTIDSLTVSDEKVKVTAGNESIQKIY
AIEAALPNDVNLTENYSGTVTLHAVDSAGKILPAQIEPSTTHLKVTVNKLTKDVPVKITQKGTLDKTLSEVKTKISDKNV
TLSGEKSALDAINSVEGTVDITGIVKETKITVPLHAAGVSLDPQEVEVTLTPVKIGS
>Mature_217_residues
MKTGKFDVPIRIEQLPGGVTATIEPKTMNIMVEDKAKKEFEVTPKADSTQLPEGFTIDSLTVSDEKVKVTAGNESIQKIY
AIEAALPNDVNLTENYSGTVTLHAVDSAGKILPAQIEPSTTHLKVTVNKLTKDVPVKITQKGTLDKTLSEVKTKISDKNV
TLSGEKSALDAINSVEGTVDITGIVKETKITVPLHAAGVSLDPQEVEVTLTPVKIGS

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 23161; Mature: 23161

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGKFDVPIRIEQLPGGVTATIEPKTMNIMVEDKAKKEFEVTPKADSTQLPEGFTIDSL
CCCCCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEE
TVSDEKVKVTAGNESIQKIYAIEAALPNDVNLTENYSGTVTLHAVDSAGKILPAQIEPST
EECCCEEEEEECCCHHEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCC
THLKVTVNKLTKDVPVKITQKGTLDKTLSEVKTKISDKNVTLSGEKSALDAINSVEGTVD
EEEEEEEHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEE
ITGIVKETKITVPLHAAGVSLDPQEVEVTLTPVKIGS
EEEEEEEEEEEEEEEECCCCCCHHHEEEEEEEEEECC
>Mature Secondary Structure
MKTGKFDVPIRIEQLPGGVTATIEPKTMNIMVEDKAKKEFEVTPKADSTQLPEGFTIDSL
CCCCCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEE
TVSDEKVKVTAGNESIQKIYAIEAALPNDVNLTENYSGTVTLHAVDSAGKILPAQIEPST
EECCCEEEEEECCCHHEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCC
THLKVTVNKLTKDVPVKITQKGTLDKTLSEVKTKISDKNVTLSGEKSALDAINSVEGTVD
EEEEEEEHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEEE
ITGIVKETKITVPLHAAGVSLDPQEVEVTLTPVKIGS
EEEEEEEEEEEEEEEECCCCCCHHHEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]