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The map label for this gene is ptcB [H]

Identifier: 125623304

GI number: 125623304

Start: 428397

End: 428723

Strand: Direct

Name: ptcB [H]

Synonym: llmg_0437

Alternate gene names: 125623304

Gene position: 428397-428723 (Clockwise)

Preceding gene: 125623303

Following gene: 125623305

Centisome position: 16.94

GC content: 39.45

Gene sequence:

>327_bases
ATGGCAGATAAAGTTATTGCACTTGCATGTGCAGCCGGTATGTCAACATCACTTTTAGTATCAAAAATGCAAAAAGCAGC
AGCAGAAAACGGAAAAGATTACGAAATTTTCGCAAAATCAACAGCAGACATTGATAATATGCTTGCAGGAACAGGTTCAC
CAAAACCAGACGTTTTACTTTTAGGCCCACAAGTTGCCTTCATGAAAGGTGAAGTTGCTAAAAAGGCAGAAATTGCTGGC
GTTCCAATGGACGTGATTAAAATGCAAGATTACGGAATGATGCGTGGGGATAAAGTTCTCGCAGCTGCTGAAAATTTGAT
GAATTAA

Upstream 100 bases:

>100_bases
CAAAAAATAGATAACGCTTGCATTATGAAAATGAAAACGTTATAATTATTTTTATAAAGAACGTTAAATTATAAAACGTT
AAGAATAAGGAGAAATAATT

Downstream 100 bases:

>100_bases
GCTTTGTTTTATTAAACCTGTGGGAGGGCGAAAGCTCTTTTACTATGTAAAAATAAGTATAAACAGAAACGGAATATAAG
AAATGACTGATAAGTACGAG

Product: cellobiose-specific PTS system IIB component

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MADKVIALACAAGMSTSLLVSKMQKAAAENGKDYEIFAKSTADIDNMLAGTGSPKPDVLLLGPQVAFMKGEVAKKAEIAG
VPMDVIKMQDYGMMRGDKVLAAAENLMN

Sequences:

>Translated_108_residues
MADKVIALACAAGMSTSLLVSKMQKAAAENGKDYEIFAKSTADIDNMLAGTGSPKPDVLLLGPQVAFMKGEVAKKAEIAG
VPMDVIKMQDYGMMRGDKVLAAAENLMN
>Mature_107_residues
ADKVIALACAAGMSTSLLVSKMQKAAAENGKDYEIFAKSTADIDNMLAGTGSPKPDVLLLGPQVAFMKGEVAKKAEIAGV
PMDVIKMQDYGMMRGDKVLAAAENLMN

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1440

COG function: function code G; Phosphotransferase system cellobiose-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 11324; Mature: 11193

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
9.3 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
8.4 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKVIALACAAGMSTSLLVSKMQKAAAENGKDYEIFAKSTADIDNMLAGTGSPKPDVLL
CCCHHEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEE
LGPQVAFMKGEVAKKAEIAGVPMDVIKMQDYGMMRGDKVLAAAENLMN
ECCCEEECCCCHHHHHHHCCCCHHHEEECCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
ADKVIALACAAGMSTSLLVSKMQKAAAENGKDYEIFAKSTADIDNMLAGTGSPKPDVLL
CCHHEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEE
LGPQVAFMKGEVAKKAEIAGVPMDVIKMQDYGMMRGDKVLAAAENLMN
ECCCEEECCCCHHHHHHHCCCCHHHEEECCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]