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The map label for this gene is vicX [H]

Identifier: 125623279

GI number: 125623279

Start: 405810

End: 406622

Strand: Reverse

Name: vicX [H]

Synonym: llmg_0412

Alternate gene names: 125623279

Gene position: 406622-405810 (Counterclockwise)

Preceding gene: 125623280

Following gene: 125623271

Centisome position: 16.08

GC content: 35.55

Gene sequence:

>813_bases
ATGACTGAACAAAATGGCTTTAAATATTCCATTCTAGCCTCTGGATCAACTGGAAATTCCTTCTACTTAGAAACTCCTAA
GAAAAAAATTCTTGTTGATGCCGGACTATCTGGAAAAAAAATAGAAAGTTTACTCTCGGAGATTGACCGTGATATCCATG
ATATTGATGCACTTTTAATTACGCACGAACATAGTGACCACATCAAAGGAATTGGTGTGCTCGCCCGTAAATATGGTATT
AACCTTTATGCGAATGAAGATACATGGTCTGAACTTGATGGTAAAAACGCTTTAGGAAAAATTCCTCTTGAGCAAAAACA
TCTTTTTGAGATGGGAAAAACGATGACATTTGGTGATATTGATATTGAATCTTTTGGTGTCAGCCATGATGCTATTGCCC
CACAATTTTATCGTTTCATGAAAGATGATAAAAGTTTCGTTATGTTGACTGATACAGGATATGTTTCAGATCGTATGCGT
GGAACCATTGAAAATGCTGATGCTTATCTAATGGAGTCTAATCATGACATTGAAATTCTAAGAATGGGTGCCTATCCTTG
GCGAACAAAACAACGTATTCTAAGTGACCAAGGCCATTTATCTAACGAAGATGGTGCCGAAGCAGCCTTTAACATTCATG
GGAATAAAACAAAAAAAATATTTTTGGGACACTTAAGTCTAAATAATAATATTAAAGAACTTGCTCATCTTACCATGGAC
GGTTATCTCCAACAACACGATGTGGATACAAAAAATGAATTAAAAATTCTTGATACCAGCCATGAACATGCAAGTCCCCT
TTATGATATCTAA

Upstream 100 bases:

>100_bases
GACTTCTTCATCAAAGAAAAATTTTTTCAAGCTCAATTTATTTCCAATAAAATAATAAGTCTCATAGCAATCCCTGACTT
TTTCTGCTACAATAGTCATT

Downstream 100 bases:

>100_bases
CATTAATCATTAAAAAATAAAAAAGAACCCACTCGGGTTCTTTTTTTTATTACATCATACCACCCATTCCCATGCTAGGG
TCCATTGGAGGCATAGCTGG

Product: ribonuclease Z

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
NLYANEDTWSELDGKNALGKIPLEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDDKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFNIHGNKTKKIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKNELKILDTSHEHASPLYDI

Sequences:

>Translated_270_residues
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
NLYANEDTWSELDGKNALGKIPLEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDDKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFNIHGNKTKKIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKNELKILDTSHEHASPLYDI
>Mature_269_residues
TEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGIN
LYANEDTWSELDGKNALGKIPLEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDDKSFVMLTDTGYVSDRMRG
TIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFNIHGNKTKKIFLGHLSLNNNIKELAHLTMDG
YLQQHDVDTKNELKILDTSHEHASPLYDI

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 30475; Mature: 30344

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLI
CCCCCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEE
THEHSDHIKGIGVLARKYGINLYANEDTWSELDGKNALGKIPLEQKHLFEMGKTMTFGDI
EECCCCCHHHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCEEEECCC
DIESFGVSHDAIAPQFYRFMKDDKSFVMLTDTGYVSDRMRGTIENADAYLMESNHDIEIL
CHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCEEEEECCCCEEEE
RMGAYPWRTKQRILSDQGHLSNEDGAEAAFNIHGNKTKKIFLGHLSLNNNIKELAHLTMD
EECCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHH
GYLQQHDVDTKNELKILDTSHEHASPLYDI
HHHHHCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLI
CCCCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEE
THEHSDHIKGIGVLARKYGINLYANEDTWSELDGKNALGKIPLEQKHLFEMGKTMTFGDI
EECCCCCHHHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCEEEECCC
DIESFGVSHDAIAPQFYRFMKDDKSFVMLTDTGYVSDRMRGTIENADAYLMESNHDIEIL
CHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCEEEEECCCCEEEE
RMGAYPWRTKQRILSDQGHLSNEDGAEAAFNIHGNKTKKIFLGHLSLNNNIKELAHLTMD
EECCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHH
GYLQQHDVDTKNELKILDTSHEHASPLYDI
HHHHHCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]