Click here to switch to the map view.

The map label for this gene is ydhF [H]

Identifier: 125623260

GI number: 125623260

Start: 383544

End: 384539

Strand: Direct

Name: ydhF [H]

Synonym: llmg_0391

Alternate gene names: 125623260

Gene position: 383544-384539 (Clockwise)

Preceding gene: 125623257

Following gene: 125623263

Centisome position: 15.16

GC content: 34.74

Gene sequence:

>996_bases
ATGGGTATTTTGCCAGGATTTCTGCTCTCCTTTGCCATTGCTATAGTAAGTTATTTACTCAATCGTTTTATCTTCCATAG
TTTAGGTTCAGCAACTATTGCAATATTATTAGGAATTATTTTGGGTAATTTGTACTTTAAACAAGTCACTTTGTTTGCAG
GAACGGCTTGGTCAGAAAAAAAACTTCTAGAGTTTTCAGTTATGTTTTTAGGAGCGACCGTAACCTTTCAAACCATTGGT
AAATTAGGGTTCTCCGGAGTAGGATTTATTCTGATACAAATGATTTCAACAATTATTTTTGTTTTGTTTATGGGTAAAAA
ACTAGGTTTTTCTGCTAATGTCTCTGCCCTAATGGCTTCTGGAAATGCAGTCTGTGGTTCATCAGCAATTGCCGCAGTCG
AACCAGTTATTGGAGCTGAGACCAGTGAGAAAAGAACATCGATTGCCATGGTCAATCTCATGGGAACTATTTTAATGCTG
AGTCTTCCATTTTTAGGAACTTGGATATTTGGTAATAATGATTTATTAAGGGGCGCACTGATTGGCGGAACAGAACAATC
TGTTGGACAAGTCGTTGCTTCAGCGACAATGGTAAATCCAAACACAACAACATTAGCAACCCTATTTAAAATTATGAGAA
TTATCATGCTTGTTTTTGTCGTTTTATATTTTGGTTTTAGAAGCAAAAAACAAACAAAGGGTGAACAAGCAACCGCTCAA
ATCAAAATTAAAAGAAATTCTTTTTTGCCATGGTACGTTGTTGGTTTCTTAGTGCTTTGTACTTTAGATACATTGATTCA
TTTTGTACCAGAAGTTTCAGCTACCGCAAAATTTCTATCAGGTTGGTGTGAAACGATTGCCTTAGCCGCTATTGGTTTGC
GACTAAATTTAGTTGAATTCATAAAAGCAGGAAGAAAATTACTGATTTATGGTTCATCTATCTTAGTTTTTCAAGTAGTA
CTTGCAATTATTTTGATAAGTCTTTTAATCAAATAA

Upstream 100 bases:

>100_bases
GGAGATTGTGTAAACTAATTGATGCTAGACAATTTAAAAAGGAAAAAGTAGAAAAATGTTAAAATTAAAAAATTATATTA
AAAATGATAGACAGGCCATC

Downstream 100 bases:

>100_bases
TCAGAAATCAAAGAAATAAAAAGTCACTAAACCTCTGTTTTAGTGACTTTTTTTATGGTAATTATTACCATCAGCTAAAT
TTTTCACTTTAGCAAGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MGILPGFLLSFAIAIVSYLLNRFIFHSLGSATIAILLGIILGNLYFKQVTLFAGTAWSEKKLLEFSVMFLGATVTFQTIG
KLGFSGVGFILIQMISTIIFVLFMGKKLGFSANVSALMASGNAVCGSSAIAAVEPVIGAETSEKRTSIAMVNLMGTILML
SLPFLGTWIFGNNDLLRGALIGGTEQSVGQVVASATMVNPNTTTLATLFKIMRIIMLVFVVLYFGFRSKKQTKGEQATAQ
IKIKRNSFLPWYVVGFLVLCTLDTLIHFVPEVSATAKFLSGWCETIALAAIGLRLNLVEFIKAGRKLLIYGSSILVFQVV
LAIILISLLIK

Sequences:

>Translated_331_residues
MGILPGFLLSFAIAIVSYLLNRFIFHSLGSATIAILLGIILGNLYFKQVTLFAGTAWSEKKLLEFSVMFLGATVTFQTIG
KLGFSGVGFILIQMISTIIFVLFMGKKLGFSANVSALMASGNAVCGSSAIAAVEPVIGAETSEKRTSIAMVNLMGTILML
SLPFLGTWIFGNNDLLRGALIGGTEQSVGQVVASATMVNPNTTTLATLFKIMRIIMLVFVVLYFGFRSKKQTKGEQATAQ
IKIKRNSFLPWYVVGFLVLCTLDTLIHFVPEVSATAKFLSGWCETIALAAIGLRLNLVEFIKAGRKLLIYGSSILVFQVV
LAIILISLLIK
>Mature_330_residues
GILPGFLLSFAIAIVSYLLNRFIFHSLGSATIAILLGIILGNLYFKQVTLFAGTAWSEKKLLEFSVMFLGATVTFQTIGK
LGFSGVGFILIQMISTIIFVLFMGKKLGFSANVSALMASGNAVCGSSAIAAVEPVIGAETSEKRTSIAMVNLMGTILMLS
LPFLGTWIFGNNDLLRGALIGGTEQSVGQVVASATMVNPNTTTLATLFKIMRIIMLVFVVLYFGFRSKKQTKGEQATAQI
KIKRNSFLPWYVVGFLVLCTLDTLIHFVPEVSATAKFLSGWCETIALAAIGLRLNLVEFIKAGRKLLIYGSSILVFQVVL
AIILISLLIK

Specific function: Unknown

COG id: COG2855

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0324 family [H]

Homologues:

Organism=Escherichia coli, GI1788482, Length=286, Percent_Identity=29.3706293706294, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018383 [H]

Pfam domain/function: PF03601 Cons_hypoth698 [H]

EC number: NA

Molecular weight: Translated: 35718; Mature: 35586

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILPGFLLSFAIAIVSYLLNRFIFHSLGSATIAILLGIILGNLYFKQVTLFAGTAWSEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KLLEFSVMFLGATVTFQTIGKLGFSGVGFILIQMISTIIFVLFMGKKLGFSANVSALMAS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
GNAVCGSSAIAAVEPVIGAETSEKRTSIAMVNLMGTILMLSLPFLGTWIFGNNDLLRGAL
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHE
IGGTEQSVGQVVASATMVNPNTTTLATLFKIMRIIMLVFVVLYFGFRSKKQTKGEQATAQ
ECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEE
IKIKRNSFLPWYVVGFLVLCTLDTLIHFVPEVSATAKFLSGWCETIALAAIGLRLNLVEF
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKAGRKLLIYGSSILVFQVVLAIILISLLIK
HHCCCEEEEECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GILPGFLLSFAIAIVSYLLNRFIFHSLGSATIAILLGIILGNLYFKQVTLFAGTAWSEK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
KLLEFSVMFLGATVTFQTIGKLGFSGVGFILIQMISTIIFVLFMGKKLGFSANVSALMAS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
GNAVCGSSAIAAVEPVIGAETSEKRTSIAMVNLMGTILMLSLPFLGTWIFGNNDLLRGAL
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHE
IGGTEQSVGQVVASATMVNPNTTTLATLFKIMRIIMLVFVVLYFGFRSKKQTKGEQATAQ
ECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEE
IKIKRNSFLPWYVVGFLVLCTLDTLIHFVPEVSATAKFLSGWCETIALAAIGLRLNLVEF
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKAGRKLLIYGSSILVFQVVLAIILISLLIK
HHCCCEEEEECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]