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The map label for this gene is ywkD [H]

Identifier: 125623224

GI number: 125623224

Start: 340804

End: 341196

Strand: Direct

Name: ywkD [H]

Synonym: llmg_0354

Alternate gene names: 125623224

Gene position: 340804-341196 (Clockwise)

Preceding gene: 125623223

Following gene: 125623225

Centisome position: 13.47

GC content: 33.59

Gene sequence:

>393_bases
ATGTATCAACCAAGATTCAACAAAATTCATCATATTGCAATCATCGCCGACGATTATGAAAAAGCTCGTCATTTCTATGT
TGATATTTTAGGATTTTCAATTATTCGAGAAAATCATCGGCCAGAAAAAGAGGATGTTAAACTTGATTTAAGACTGAATG
ATGAAACAGAACTTGAATTATTTATTAAATCAGGAGCGCCCGAACGTTTAACTTATCCAGAAGCAAAAGGATACCGACAT
CTCGCTTTAACAACAACGAATATTGAAGAAGATAGAAATTATTTGATAAGCCAAGGGGTAAAAGTAGAGGAAATTCGGCA
GGATGAGATTACTGACAAAAAAATGCTCTTCTTTTATGACCCAGATGATTTACCAATAGAACTTCATGAGTAA

Upstream 100 bases:

>100_bases
GAAGGCCATGTCCAAACTTTAAAAAGTAAAGGTGAAGAAGTTCAAATTTTAGAATAATCTAGTGAATAATGAGTAGCTGA
TAGGTAAGAGGAGTTAGGAA

Downstream 100 bases:

>100_bases
TTTTTTGAAAAAATCAGATGAAGGAAAGATTTTTATTTTTGCTGACGCTTCTGTCAGCAAATAAAAGGGCTTACATAAAA
TAAAAGCTAGAAAAAAAAGA

Product: putative glyoxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MYQPRFNKIHHIAIIADDYEKARHFYVDILGFSIIRENHRPEKEDVKLDLRLNDETELELFIKSGAPERLTYPEAKGYRH
LALTTTNIEEDRNYLISQGVKVEEIRQDEITDKKMLFFYDPDDLPIELHE

Sequences:

>Translated_130_residues
MYQPRFNKIHHIAIIADDYEKARHFYVDILGFSIIRENHRPEKEDVKLDLRLNDETELELFIKSGAPERLTYPEAKGYRH
LALTTTNIEEDRNYLISQGVKVEEIRQDEITDKKMLFFYDPDDLPIELHE
>Mature_130_residues
MYQPRFNKIHHIAIIADDYEKARHFYVDILGFSIIRENHRPEKEDVKLDLRLNDETELELFIKSGAPERLTYPEAKGYRH
LALTTTNIEEDRNYLISQGVKVEEIRQDEITDKKMLFFYDPDDLPIELHE

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081697, Length=123, Percent_Identity=47.1544715447154, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15534; Mature: 15534

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQPRFNKIHHIAIIADDYEKARHFYVDILGFSIIRENHRPEKEDVKLDLRLNDETELEL
CCCCCCCCEEEEEEEECCCHHHHHEEHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEE
FIKSGAPERLTYPEAKGYRHLALTTTNIEEDRNYLISQGVKVEEIRQDEITDKKMLFFYD
EEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCHHHHCCCCCCCCEEEEEEC
PDDLPIELHE
CCCCCEEECC
>Mature Secondary Structure
MYQPRFNKIHHIAIIADDYEKARHFYVDILGFSIIRENHRPEKEDVKLDLRLNDETELEL
CCCCCCCCEEEEEEEECCCHHHHHEEHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEE
FIKSGAPERLTYPEAKGYRHLALTTTNIEEDRNYLISQGVKVEEIRQDEITDKKMLFFYD
EEECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCHHHHCCCCCCCCEEEEEEC
PDDLPIELHE
CCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]