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The map label for this gene is cbiQ2 [H]

Identifier: 125623161

GI number: 125623161

Start: 277950

End: 278750

Strand: Direct

Name: cbiQ2 [H]

Synonym: llmg_0289

Alternate gene names: 125623161

Gene position: 277950-278750 (Clockwise)

Preceding gene: 125623160

Following gene: 125623162

Centisome position: 10.99

GC content: 37.45

Gene sequence:

>801_bases
ATGCAAAATATGCTGATGGGACGTTACATTCCAGGTGACAGTATCATTCACCGGATGGACCCGCGTTCAAAACTTTTAGT
CATGATTGCTTTTGTCGTCATTATCTTTTTGGCTCATGATTGGTTAGGCTATCTTCTTTTAGTGCTTTACACTTTGGCCG
GTGTCTTACTATCAAAGATTTCAGTCTCTTACTTTTTAAGAGGCCTGCGGCCAATGATTGGTTTAATTCTGTTCACAGTC
ATTTTCCAAATGCTTTTTACCAACGGTCAACATGTCATTTTTAGCTTATGGTTTATCAAGATTTCGACGGAATCTTTGAT
TAATGCGGTTTATATTTTCTTCCGTTTTGTTTTAATTATCTTTATGTCAACGATTTTGACCTTAACTACACCACCATTGA
CCTTAGCTGATGGAATTGAAAAAGGCTTGGGCCCATTGAAAAAAATTAAAGTTCCTGTTCACGAATTAGGTTTGATGCTA
TCTATATCATTACGTTTTATTCCAACATTAATGGATGACACAACAATGATTATGAATGCTCAAAAAGCCAGAGGAATGGA
TTTTGGCGAAGGAAATCTGCTGAAAAAAATTAAATCAGTCATTCCAATTTTGATTCCACTTTTCGTCAGCTCATTTCGTC
GTGCCGATGATTTAGCTGTAGCCATGGAAAGTCGCGGTTATCAAGGTGGCGATGGGCGGACAAAATATCGTCAGCTCAAA
TGGCAAAGTCGTGACAGTCTACTGGTCGTAAGTATTATTATCATGACCATTTTACTTATTCTATGGTCAAAAGTTTCCTA
G

Upstream 100 bases:

>100_bases
AAAAAACAGGAGCGGTCGCCTTTGAAAAATTACCCATCACACGGGCTGAGCTTGTTACTTTACTGACAAGTCTGTCAGTA
AATTCAGGAGGTGAAAACTG

Downstream 100 bases:

>100_bases
AAAAAGTTCAAAGGAGAAAAAATGATAACTTTAAACGTAAATAGTCTAGAAAATGCCGAGATTTTTTGGAAAGAACTAGG
TTTAGAAGAGGAAATAGCAC

Product: putative cobalt ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQNMLMGRYIPGDSIIHRMDPRSKLLVMIAFVVIIFLAHDWLGYLLLVLYTLAGVLLSKISVSYFLRGLRPMIGLILFTV
IFQMLFTNGQHVIFSLWFIKISTESLINAVYIFFRFVLIIFMSTILTLTTPPLTLADGIEKGLGPLKKIKVPVHELGLML
SISLRFIPTLMDDTTMIMNAQKARGMDFGEGNLLKKIKSVIPILIPLFVSSFRRADDLAVAMESRGYQGGDGRTKYRQLK
WQSRDSLLVVSIIIMTILLILWSKVS

Sequences:

>Translated_266_residues
MQNMLMGRYIPGDSIIHRMDPRSKLLVMIAFVVIIFLAHDWLGYLLLVLYTLAGVLLSKISVSYFLRGLRPMIGLILFTV
IFQMLFTNGQHVIFSLWFIKISTESLINAVYIFFRFVLIIFMSTILTLTTPPLTLADGIEKGLGPLKKIKVPVHELGLML
SISLRFIPTLMDDTTMIMNAQKARGMDFGEGNLLKKIKSVIPILIPLFVSSFRRADDLAVAMESRGYQGGDGRTKYRQLK
WQSRDSLLVVSIIIMTILLILWSKVS
>Mature_266_residues
MQNMLMGRYIPGDSIIHRMDPRSKLLVMIAFVVIIFLAHDWLGYLLLVLYTLAGVLLSKISVSYFLRGLRPMIGLILFTV
IFQMLFTNGQHVIFSLWFIKISTESLINAVYIFFRFVLIIFMSTILTLTTPPLTLADGIEKGLGPLKKIKVPVHELGLML
SISLRFIPTLMDDTTMIMNAQKARGMDFGEGNLLKKIKSVIPILIPLFVSSFRRADDLAVAMESRGYQGGDGRTKYRQLK
WQSRDSLLVVSIIIMTILLILWSKVS

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 30161; Mature: 30161

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]