| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is 125623041
Identifier: 125623041
GI number: 125623041
Start: 152726
End: 154126
Strand: Direct
Name: 125623041
Synonym: llmg_0162
Alternate gene names: NA
Gene position: 152726-154126 (Clockwise)
Preceding gene: 125623040
Following gene: 125623042
Centisome position: 6.04
GC content: 35.4
Gene sequence:
>1401_bases ATGGAAAGTAGAAAAAAAGTCGCTTCTATAATTCTAGGACTAGTATTGCTTTTGCAATATATTGTTACACCAGTAGGAGT GATTGCGGAAGCATTGACTGATAGCAGCGTAAATACTGCTATTAGTTTAAGCCAACTTAAAATAGACGAATCAGAAACAA AAACTGATCTAACGTCATTTAACTTAACACTTAAAGTTGAAAAACCAATTGAACAAAATGAGACAGTAATTATCGATTTG AACAGTTCTATTAATACACCTAGTGAAGATAATAAAACAAAATCAACAACAGATTTTACTGCTAATGAAAACAAATTAAC GGTAGTTGTAGCTGCGAATAGCAACAATGAATTGAACATTAACTTTTCTGTACTAAAAGAAAAATTAAAAGACCTCAATC AGTTAACAGCAACGCTTAATAATCAAAAGGTAAGTGTTGATCTTCCAACAACTGATTCAACGACGGATTCAACAGAAAGT TCAACGAGTACTTCAGAATCTAAAAGTACAAGTAATTCAGAGATTTCAACAAACTCTTCTGAGAGCAAGAGTCAATCAAC TTCTGAAAGCAAAAAAGAACAAACAAAACAAGAAACAACAACTCAAGCTGATGCCGGTCGAAATATTCGTGACCTTCTAG ATGGTGCAGGAGTTTCTCCAGCTTCTATCATCAATGATGCAACGACTGTTTATGTTGATAAAGATGGAAATCCATATCCT GACCAGAATAATGTCCCTATTGACGCCGCTGTTAAAATTGATTACACATGGAGTATCCCAGAAGATATTATGCCATTAAA GGCTGGAGATTACTTTGACTTCAAGTTACCAGATGGAGTGACAATTGAAGAAGCTATGGGAAATATAGGGGATTACGGAA CTTATACTATTGATGCTGATGGTACAGTTCACTTTGTATTTAATGAAAAAGTCGAAACAAAACATGATATTCATGGGACT TTCCATTATGATGCCCACTTTGATAAAGAAACAGTTCCTGGGGAAGTTGTAATTGATACACCAACGGAGGAAAATTTCCC TCCTTCTGAGGTTCACGTTCGCCCAGACTATAATCAAGGGATAGACAAATCAGGACACTTTGACAAGACCCCAAATCCTA GTGAAGTTATTTGGGAAATTAATATTAATCGTCCATTAAATACGATGGAGAATGCAACTCTTACTGACCCAATGCCAGCT GGAACTACTTATAAGTCAGTAGTCATTTATCCAGAAACAGTTGGGCCAAATGGAGAAATCCTATCAGTTGATAAAGCTCA TCCTTTAGTTGAAGGAACCGATTATACGGTAGATGCAAATGGGAAAATTACATTCATCGGTAAGTATGCTAAGACTGATC AAGCCTTTAATGTTGTTTATACAACATCTATAGTGTATTGA
Upstream 100 bases:
>100_bases TGTGTTATAATGTCCTAGTATCAGGGTGGCACAATTGGACGCTAGAAAAAAGACTTTCTATGGTGTGAATTCTGATTAAA AACTCAACAAGGAGGACATT
Downstream 100 bases:
>100_bases TGGATAAGAAAAATGGAAAATATATTTTATCTACGTTTGAAAGCTTTGACTCATGAATCTGGTAACTCATTTAATCAAAT TGAGAGAGAATTAGGCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Collagen Adhesion Protein; Cell Wall Anchor Domain-Containing Protein; Outer Membrane Protein; Celll Wall Surface Anchor Family Protein; Cell Wall Anchoring Protein; Collagen Adhesin; Cna B Domain Protein
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MESRKKVASIILGLVLLLQYIVTPVGVIAEALTDSSVNTAISLSQLKIDESETKTDLTSFNLTLKVEKPIEQNETVIIDL NSSINTPSEDNKTKSTTDFTANENKLTVVVAANSNNELNINFSVLKEKLKDLNQLTATLNNQKVSVDLPTTDSTTDSTES STSTSESKSTSNSEISTNSSESKSQSTSESKKEQTKQETTTQADAGRNIRDLLDGAGVSPASIINDATTVYVDKDGNPYP DQNNVPIDAAVKIDYTWSIPEDIMPLKAGDYFDFKLPDGVTIEEAMGNIGDYGTYTIDADGTVHFVFNEKVETKHDIHGT FHYDAHFDKETVPGEVVIDTPTEENFPPSEVHVRPDYNQGIDKSGHFDKTPNPSEVIWEININRPLNTMENATLTDPMPA GTTYKSVVIYPETVGPNGEILSVDKAHPLVEGTDYTVDANGKITFIGKYAKTDQAFNVVYTTSIVY
Sequences:
>Translated_466_residues MESRKKVASIILGLVLLLQYIVTPVGVIAEALTDSSVNTAISLSQLKIDESETKTDLTSFNLTLKVEKPIEQNETVIIDL NSSINTPSEDNKTKSTTDFTANENKLTVVVAANSNNELNINFSVLKEKLKDLNQLTATLNNQKVSVDLPTTDSTTDSTES STSTSESKSTSNSEISTNSSESKSQSTSESKKEQTKQETTTQADAGRNIRDLLDGAGVSPASIINDATTVYVDKDGNPYP DQNNVPIDAAVKIDYTWSIPEDIMPLKAGDYFDFKLPDGVTIEEAMGNIGDYGTYTIDADGTVHFVFNEKVETKHDIHGT FHYDAHFDKETVPGEVVIDTPTEENFPPSEVHVRPDYNQGIDKSGHFDKTPNPSEVIWEININRPLNTMENATLTDPMPA GTTYKSVVIYPETVGPNGEILSVDKAHPLVEGTDYTVDANGKITFIGKYAKTDQAFNVVYTTSIVY >Mature_466_residues MESRKKVASIILGLVLLLQYIVTPVGVIAEALTDSSVNTAISLSQLKIDESETKTDLTSFNLTLKVEKPIEQNETVIIDL NSSINTPSEDNKTKSTTDFTANENKLTVVVAANSNNELNINFSVLKEKLKDLNQLTATLNNQKVSVDLPTTDSTTDSTES STSTSESKSTSNSEISTNSSESKSQSTSESKKEQTKQETTTQADAGRNIRDLLDGAGVSPASIINDATTVYVDKDGNPYP DQNNVPIDAAVKIDYTWSIPEDIMPLKAGDYFDFKLPDGVTIEEAMGNIGDYGTYTIDADGTVHFVFNEKVETKHDIHGT FHYDAHFDKETVPGEVVIDTPTEENFPPSEVHVRPDYNQGIDKSGHFDKTPNPSEVIWEININRPLNTMENATLTDPMPA GTTYKSVVIYPETVGPNGEILSVDKAHPLVEGTDYTVDANGKITFIGKYAKTDQAFNVVYTTSIVY
Specific function: Unknown
COG id: COG4932
COG function: function code M; Predicted outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50932; Mature: 50932
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESRKKVASIILGLVLLLQYIVTPVGVIAEALTDSSVNTAISLSQLKIDESETKTDLTSF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEE NLTLKVEKPIEQNETVIIDLNSSINTPSEDNKTKSTTDFTANENKLTVVVAANSNNELNI EEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCEEEE NFSVLKEKLKDLNQLTATLNNQKVSVDLPTTDSTTDSTESSTSTSESKSTSNSEISTNSS EHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESKSQSTSESKKEQTKQETTTQADAGRNIRDLLDGAGVSPASIINDATTVYVDKDGNPYP CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHCCCEEEEECCCCCCCC DQNNVPIDAAVKIDYTWSIPEDIMPLKAGDYFDFKLPDGVTIEEAMGNIGDYGTYTIDAD CCCCCCEEEEEEEEEEECCCHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEECC GTVHFVFNEKVETKHDIHGTFHYDAHFDKETVPGEVVIDTPTEENFPPSEVHVRPDYNQG CEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCC IDKSGHFDKTPNPSEVIWEININRPLNTMENATLTDPMPAGTTYKSVVIYPETVGPNGEI CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCE LSVDKAHPLVEGTDYTVDANGKITFIGKYAKTDQAFNVVYTTSIVY EEECCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEEEEEEEEC >Mature Secondary Structure MESRKKVASIILGLVLLLQYIVTPVGVIAEALTDSSVNTAISLSQLKIDESETKTDLTSF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEE NLTLKVEKPIEQNETVIIDLNSSINTPSEDNKTKSTTDFTANENKLTVVVAANSNNELNI EEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCCEEEE NFSVLKEKLKDLNQLTATLNNQKVSVDLPTTDSTTDSTESSTSTSESKSTSNSEISTNSS EHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESKSQSTSESKKEQTKQETTTQADAGRNIRDLLDGAGVSPASIINDATTVYVDKDGNPYP CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHCCCEEEEECCCCCCCC DQNNVPIDAAVKIDYTWSIPEDIMPLKAGDYFDFKLPDGVTIEEAMGNIGDYGTYTIDAD CCCCCCEEEEEEEEEEECCCHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEECC GTVHFVFNEKVETKHDIHGTFHYDAHFDKETVPGEVVIDTPTEENFPPSEVHVRPDYNQG CEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCC IDKSGHFDKTPNPSEVIWEININRPLNTMENATLTDPMPAGTTYKSVVIYPETVGPNGEI CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCE LSVDKAHPLVEGTDYTVDANGKITFIGKYAKTDQAFNVVYTTSIVY EEECCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA