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The map label for this gene is glgB [H]

Identifier: 125623037

GI number: 125623037

Start: 148498

End: 150441

Strand: Reverse

Name: glgB [H]

Synonym: llmg_0158

Alternate gene names: 125623037

Gene position: 150441-148498 (Counterclockwise)

Preceding gene: 125623038

Following gene: 125623035

Centisome position: 5.95

GC content: 36.42

Gene sequence:

>1944_bases
ATGCCTCTAAATATCTTGGATTATGACCCCTATTTGGAACCTTTCAAAGATGACTTGTCTTTACGCCTCTTTGAATTTGC
TAGAACTAAGAAACGGCTTTTGGGCGTTGATGGTTCTTTAGTTGATTTTGCGAACGGCTATAAGTATTTTGGCTTCCAAC
AAGAAAGTAAACACTGGACTTTCCGCGAATGGGCACCAAATGCTAAAAAAGCTTGGCTTGTTGGTGACTTTAACAATTGG
GAAAACAACTATGAACTAAAACAGGCTTATGGCGGGACTTGGGAAATTTCAGTTCCTGGATTATTACCTGTGGGTTCTAA
AGTAAAAATAAAGTTGCTTTTGCCAACTGGAGAAGTTGTTTATCGTGTTCCTTCTTACATTATGTATGCTCTTCCTAATG
AAAATCATGGTTTAGACGGGGTTATTACTCAGCCTAAGTACGAATGGAAAAATAAAAGCCCTAAACTAAGCGAAGCACCT
TTGATTTATGAAGCACATATTGGGATTTCAACCGAAGAATACAAAATTAATTCTTACAAAGAATTCACGCGCGATGTTTT
ACCCAGAATTAAAAAAGATGGTTACAATACCATTCAGCTGATGGCAATTATGGAACACCCGCTCTATGCTAGTTTTGGTT
ATCAAGTTTCCAATTTTTTTGCCATCTCTAGTCGCTTTGGTCAGCCAGAAGATTTAATGGAATTGATTGATAAAGCACAT
GGTTTGGGTTTGCAAGTGCTTTTAGACGTGGTTCATTCACATGCTGTAAAAAATATTGAGGATGGGCTCAACTATTTTGA
TGGAACAGAAAATCAGTATTTTCATGAAGGCGAACGGGGAAATCATCCAGCTTGGAAGACGAAACTTTTTAATTATGGCA
AAGATGAAGTCCTTCATTTTTTACTATCAAATCTAAAATTTTGGCTAGACATTTATCATTTCGATGGCTTTCGTTTTGAT
GGAGTAACTTCAATGCTTTATCATGACCATGGTTTAGGAACTGCTTTTACAGATTATAGTAAGTATTTTTCACTTAATAC
AGATGTTGAAGCCGTGACATATTTGATGCTGGCTAATGAACTAACTCATCTCTTTAATCCATCAGCAACAACAATCGCCG
AAGACATGTCTGCCATGCCTGGGATGGCACTACCTATCTCGGCTGGCGGAATTGGTTTTGATTATCGTTTGTCAATGGGA
ATTCCTGATTTTTGGATTAAACAATTGAAAGAAAAAACAGATAATAGTTTAGATTTGCTAAGTTTATGGTGGGAATTGAC
GACCAGACGACCTGGAGAGAAAAATATCGGTTATTCAGAAAGTCATGACCAAGCTTTAGTTGGTGATAAAACACTGATGA
TGTGGCTAGCTAATGAAGAAATCTATTGGAACATGGACATCAATAGTCAATCTCTGATTATTGACCGCGCCATTGCCCTC
CATAAGTTAATTCGATTGATTACTTTCAGTCTAGCAGGTGAAGGTTATTTAAATTTCATGGGAAACGAATTTGGTCATCC
TGAATGGCTTGACTTCCCTCGAGAAGAAAATCATGATGATTTTCAACATGCTAGAAGACAATGGTCACTTGCTGATAACG
AAAATTTACGTTTCAAATATTTACTGGCATTTGACCAAGCCATGCTCAATTTAGAACATGATTTCAAATTTTTAGAAAGT
ACAGATCCTGTCCAACAGCTTTGGATTAAGGATTCGGATAAATTACTGGCATACAAAAAAGGACAATTAGTTTTTGTCTT
TAATTTCCACCCTAGTTATGAGCAAAAACTTCAGCTCCAATTTTCTAAAAAACCAGAACTTATCTTTGACAGTGATGATC
AAAAATTCGGGGGATTTGGTCCTAGAAGTAGTTTTGGTTGGTCAAAAGGAACTTTAAATTTGATTCTTGAACCTAGAACA
GCGATGGTATTTAAAATTAAATAA

Upstream 100 bases:

>100_bases
CTGGTCAGTAAATTTTTTTATTTTTAATTCCATTATGAAAACCTTTGCAAAAGTGCTAAAATAGAGCTAGAAATGATTGT
CAGTAAAAGGAGAATAGCTT

Downstream 100 bases:

>100_bases
TAAAAAACCTGTCAAATGACAGGTTTTTTTACTGACAGAAATCCGAAAAGTCTGTCAGTAATTTCTAAAATGCATTTAAA
TTTGGTTCCATCAAAGTCCA

Product: GlgB protein

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 647; Mature: 646

Protein sequence:

>647_residues
MPLNILDYDPYLEPFKDDLSLRLFEFARTKKRLLGVDGSLVDFANGYKYFGFQQESKHWTFREWAPNAKKAWLVGDFNNW
ENNYELKQAYGGTWEISVPGLLPVGSKVKIKLLLPTGEVVYRVPSYIMYALPNENHGLDGVITQPKYEWKNKSPKLSEAP
LIYEAHIGISTEEYKINSYKEFTRDVLPRIKKDGYNTIQLMAIMEHPLYASFGYQVSNFFAISSRFGQPEDLMELIDKAH
GLGLQVLLDVVHSHAVKNIEDGLNYFDGTENQYFHEGERGNHPAWKTKLFNYGKDEVLHFLLSNLKFWLDIYHFDGFRFD
GVTSMLYHDHGLGTAFTDYSKYFSLNTDVEAVTYLMLANELTHLFNPSATTIAEDMSAMPGMALPISAGGIGFDYRLSMG
IPDFWIKQLKEKTDNSLDLLSLWWELTTRRPGEKNIGYSESHDQALVGDKTLMMWLANEEIYWNMDINSQSLIIDRAIAL
HKLIRLITFSLAGEGYLNFMGNEFGHPEWLDFPREENHDDFQHARRQWSLADNENLRFKYLLAFDQAMLNLEHDFKFLES
TDPVQQLWIKDSDKLLAYKKGQLVFVFNFHPSYEQKLQLQFSKKPELIFDSDDQKFGGFGPRSSFGWSKGTLNLILEPRT
AMVFKIK

Sequences:

>Translated_647_residues
MPLNILDYDPYLEPFKDDLSLRLFEFARTKKRLLGVDGSLVDFANGYKYFGFQQESKHWTFREWAPNAKKAWLVGDFNNW
ENNYELKQAYGGTWEISVPGLLPVGSKVKIKLLLPTGEVVYRVPSYIMYALPNENHGLDGVITQPKYEWKNKSPKLSEAP
LIYEAHIGISTEEYKINSYKEFTRDVLPRIKKDGYNTIQLMAIMEHPLYASFGYQVSNFFAISSRFGQPEDLMELIDKAH
GLGLQVLLDVVHSHAVKNIEDGLNYFDGTENQYFHEGERGNHPAWKTKLFNYGKDEVLHFLLSNLKFWLDIYHFDGFRFD
GVTSMLYHDHGLGTAFTDYSKYFSLNTDVEAVTYLMLANELTHLFNPSATTIAEDMSAMPGMALPISAGGIGFDYRLSMG
IPDFWIKQLKEKTDNSLDLLSLWWELTTRRPGEKNIGYSESHDQALVGDKTLMMWLANEEIYWNMDINSQSLIIDRAIAL
HKLIRLITFSLAGEGYLNFMGNEFGHPEWLDFPREENHDDFQHARRQWSLADNENLRFKYLLAFDQAMLNLEHDFKFLES
TDPVQQLWIKDSDKLLAYKKGQLVFVFNFHPSYEQKLQLQFSKKPELIFDSDDQKFGGFGPRSSFGWSKGTLNLILEPRT
AMVFKIK
>Mature_646_residues
PLNILDYDPYLEPFKDDLSLRLFEFARTKKRLLGVDGSLVDFANGYKYFGFQQESKHWTFREWAPNAKKAWLVGDFNNWE
NNYELKQAYGGTWEISVPGLLPVGSKVKIKLLLPTGEVVYRVPSYIMYALPNENHGLDGVITQPKYEWKNKSPKLSEAPL
IYEAHIGISTEEYKINSYKEFTRDVLPRIKKDGYNTIQLMAIMEHPLYASFGYQVSNFFAISSRFGQPEDLMELIDKAHG
LGLQVLLDVVHSHAVKNIEDGLNYFDGTENQYFHEGERGNHPAWKTKLFNYGKDEVLHFLLSNLKFWLDIYHFDGFRFDG
VTSMLYHDHGLGTAFTDYSKYFSLNTDVEAVTYLMLANELTHLFNPSATTIAEDMSAMPGMALPISAGGIGFDYRLSMGI
PDFWIKQLKEKTDNSLDLLSLWWELTTRRPGEKNIGYSESHDQALVGDKTLMMWLANEEIYWNMDINSQSLIIDRAIALH
KLIRLITFSLAGEGYLNFMGNEFGHPEWLDFPREENHDDFQHARRQWSLADNENLRFKYLLAFDQAMLNLEHDFKFLEST
DPVQQLWIKDSDKLLAYKKGQLVFVFNFHPSYEQKLQLQFSKKPELIFDSDDQKFGGFGPRSSFGWSKGTLNLILEPRTA
MVFKIK

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=633, Percent_Identity=48.9731437598736, Blast_Score=598, Evalue=1e-171,
Organism=Escherichia coli, GI1789839, Length=585, Percent_Identity=27.6923076923077, Blast_Score=163, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17554896, Length=668, Percent_Identity=45.3592814371257, Blast_Score=557, Evalue=1e-159,
Organism=Caenorhabditis elegans, GI32564391, Length=594, Percent_Identity=46.1279461279461, Blast_Score=513, Evalue=1e-145,
Organism=Saccharomyces cerevisiae, GI6320826, Length=701, Percent_Identity=47.0756062767475, Blast_Score=579, Evalue=1e-166,
Organism=Drosophila melanogaster, GI28573410, Length=673, Percent_Identity=45.4680534918276, Blast_Score=570, Evalue=1e-163,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 74957; Mature: 74826

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNILDYDPYLEPFKDDLSLRLFEFARTKKRLLGVDGSLVDFANGYKYFGFQQESKHWT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCCCCE
FREWAPNAKKAWLVGDFNNWENNYELKQAYGGTWEISVPGLLPVGSKVKIKLLLPTGEVV
EHHCCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCHHH
YRVPSYIMYALPNENHGLDGVITQPKYEWKNKSPKLSEAPLIYEAHIGISTEEYKINSYK
HHCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCHHH
EFTRDVLPRIKKDGYNTIQLMAIMEHPLYASFGYQVSNFFAISSRFGQPEDLMELIDKAH
HHHHHHHHHHHCCCCCEEEEEEEHHCCCEEECCCCHHHEEEEHHCCCCHHHHHHHHHHHC
GLGLQVLLDVVHSHAVKNIEDGLNYFDGTENQYFHEGERGNHPAWKTKLFNYGKDEVLHF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHCCCHHHHHHH
LLSNLKFWLDIYHFDGFRFDGVTSMLYHDHGLGTAFTDYSKYFSLNTDVEAVTYLMLANE
HHHHHHEEEEEEEECCEEECCHHEEHEECCCCCCHHHCHHHHEECCCCHHHHHHHHHHHH
LTHLFNPSATTIAEDMSAMPGMALPISAGGIGFDYRLSMGIPDFWIKQLKEKTDNSLDLL
HHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHH
SLWWELTTRRPGEKNIGYSESHDQALVGDKTLMMWLANEEIYWNMDINSQSLIIDRAIAL
HHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCEEEEEECCCCCHHHHHHHHHH
HKLIRLITFSLAGEGYLNFMGNEFGHPEWLDFPREENHDDFQHARRQWSLADNENLRFKY
HHHHHHHHHHHCCCCHHEECCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE
LLAFDQAMLNLEHDFKFLESTDPVQQLWIKDSDKLLAYKKGQLVFVFNFHPSYEQKLQLQ
EEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCEEEEE
FSKKPELIFDSDDQKFGGFGPRSSFGWSKGTLNLILEPRTAMVFKIK
ECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEC
>Mature Secondary Structure 
PLNILDYDPYLEPFKDDLSLRLFEFARTKKRLLGVDGSLVDFANGYKYFGFQQESKHWT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCCCCCCCE
FREWAPNAKKAWLVGDFNNWENNYELKQAYGGTWEISVPGLLPVGSKVKIKLLLPTGEVV
EHHCCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCHHH
YRVPSYIMYALPNENHGLDGVITQPKYEWKNKSPKLSEAPLIYEAHIGISTEEYKINSYK
HHCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCHHH
EFTRDVLPRIKKDGYNTIQLMAIMEHPLYASFGYQVSNFFAISSRFGQPEDLMELIDKAH
HHHHHHHHHHHCCCCCEEEEEEEHHCCCEEECCCCHHHEEEEHHCCCCHHHHHHHHHHHC
GLGLQVLLDVVHSHAVKNIEDGLNYFDGTENQYFHEGERGNHPAWKTKLFNYGKDEVLHF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHCCCHHHHHHH
LLSNLKFWLDIYHFDGFRFDGVTSMLYHDHGLGTAFTDYSKYFSLNTDVEAVTYLMLANE
HHHHHHEEEEEEEECCEEECCHHEEHEECCCCCCHHHCHHHHEECCCCHHHHHHHHHHHH
LTHLFNPSATTIAEDMSAMPGMALPISAGGIGFDYRLSMGIPDFWIKQLKEKTDNSLDLL
HHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHH
SLWWELTTRRPGEKNIGYSESHDQALVGDKTLMMWLANEEIYWNMDINSQSLIIDRAIAL
HHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCEEEEEECCCCCHHHHHHHHHH
HKLIRLITFSLAGEGYLNFMGNEFGHPEWLDFPREENHDDFQHARRQWSLADNENLRFKY
HHHHHHHHHHHCCCCHHEECCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE
LLAFDQAMLNLEHDFKFLESTDPVQQLWIKDSDKLLAYKKGQLVFVFNFHPSYEQKLQLQ
EEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCEEEEE
FSKKPELIFDSDDQKFGGFGPRSSFGWSKGTLNLILEPRTAMVFKIK
ECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA