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The map label for this gene is tetR

Identifier: 125623036

GI number: 125623036

Start: 147888

End: 148433

Strand: Direct

Name: tetR

Synonym: llmg_0157

Alternate gene names: NA

Gene position: 147888-148433 (Clockwise)

Preceding gene: 125623031

Following gene: 125623039

Centisome position: 5.85

GC content: 34.43

Gene sequence:

>546_bases
ATGAACACACGTGAAAAAATATTAAAGAAGACAGAAGAATTTATCCTAAAAAATGGAATTGAAAAGTTGACCATTTCAAA
AATTGCCAAAGAATTGAATATTAGTCAGCCAGCGATTTATAAACATTTTAAAAGTAAAGATGAACTTTTGACCATTCTAT
CACTTCGTTGGCTTAATGGTCAGACGCTTGTCAAAATTTTTCCTTTTGATACAAGTTCTTATGAGCATCAAAAAGATATT
GTCCATGATTGGCTTTGGTCAGTAGCTATTGCCAAGTATGAAGCCCACAGAAAAACACCAGAAATGTTTGCTCTATATAC
TACTTATATTGGTGAGAACTTAGAATTAGGACGCCAACATATTTTAAAAATGGTAGAGAGTTTAAAAACGGCGGCCAAAC
TAGAATCTTATGAGGAGGCTGGCGCTTATATCCAAGCTTTCGTTTATTTTCACCACCCGAAAATTGCCCCTCAGTGGGAC
GATCAATTTCAAACGCAATTTGAAAATCTCTGGACTTTGATGGAACCAAATTTAAATGCATTTTAG

Upstream 100 bases:

>100_bases
TGATAAAGGTTATTATTTTTTGTTTTTATAACCAACAAAATGAATTATAAACCAGAAAGTTATATTTGTCAATAATTATA
ACTTGTGTTACAATTAATTT

Downstream 100 bases:

>100_bases
AAATTACTGACAGACTTTTCGGATTTCTGTCAGTAAAAAAACCTGTCATTTGACAGGTTTTTTATTATTTAATTTTAAAT
ACCATCGCTGTTCTAGGTTC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Tetr-Family Transcriptional Regulator

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNTREKILKKTEEFILKNGIEKLTISKIAKELNISQPAIYKHFKSKDELLTILSLRWLNGQTLVKIFPFDTSSYEHQKDI
VHDWLWSVAIAKYEAHRKTPEMFALYTTYIGENLELGRQHILKMVESLKTAAKLESYEEAGAYIQAFVYFHHPKIAPQWD
DQFQTQFENLWTLMEPNLNAF

Sequences:

>Translated_181_residues
MNTREKILKKTEEFILKNGIEKLTISKIAKELNISQPAIYKHFKSKDELLTILSLRWLNGQTLVKIFPFDTSSYEHQKDI
VHDWLWSVAIAKYEAHRKTPEMFALYTTYIGENLELGRQHILKMVESLKTAAKLESYEEAGAYIQAFVYFHHPKIAPQWD
DQFQTQFENLWTLMEPNLNAF
>Mature_181_residues
MNTREKILKKTEEFILKNGIEKLTISKIAKELNISQPAIYKHFKSKDELLTILSLRWLNGQTLVKIFPFDTSSYEHQKDI
VHDWLWSVAIAKYEAHRKTPEMFALYTTYIGENLELGRQHILKMVESLKTAAKLESYEEAGAYIQAFVYFHHPKIAPQWD
DQFQTQFENLWTLMEPNLNAF

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21340; Mature: 21340

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTREKILKKTEEFILKNGIEKLTISKIAKELNISQPAIYKHFKSKDELLTILSLRWLNG
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCC
QTLVKIFPFDTSSYEHQKDIVHDWLWSVAIAKYEAHRKTPEMFALYTTYIGENLELGRQH
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
ILKMVESLKTAAKLESYEEAGAYIQAFVYFHHPKIAPQWDDQFQTQFENLWTLMEPNLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
F
C
>Mature Secondary Structure
MNTREKILKKTEEFILKNGIEKLTISKIAKELNISQPAIYKHFKSKDELLTILSLRWLNG
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCC
QTLVKIFPFDTSSYEHQKDIVHDWLWSVAIAKYEAHRKTPEMFALYTTYIGENLELGRQH
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
ILKMVESLKTAAKLESYEEAGAYIQAFVYFHHPKIAPQWDDQFQTQFENLWTLMEPNLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA