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The map label for this gene is ybaB [C]

Identifier: 125623007

GI number: 125623007

Start: 123002

End: 123301

Strand: Reverse

Name: ybaB [C]

Synonym: llmg_0128

Alternate gene names: 125623007

Gene position: 123301-123002 (Counterclockwise)

Preceding gene: 125623009

Following gene: 125623002

Centisome position: 4.87

GC content: 33.0

Gene sequence:

>300_bases
ATGATGAATATGCAATCAATGATGAAACAAGCACAAAAACTTCAAAAACAAATGCAAGTTTCACAAGAAGAAATTGCCAA
TACAACTTTTGTTGGTAAATCTGCTCAAGACCTTGTAACGGTTGAATTTTCTGGTGATCGCACCTTGAAATCTCTTAACA
TTAATCCAGATGTTATTGACCCTGAAGATCCTGAAACTTTACAAGATATGGTTACTGATGCGGTTAATGATGCACTTAGT
CAAATTGAAAAAGTTACAGAACAAAAACTCGGAAAATTCACTAAAGGATTACCATTTTAA

Upstream 100 bases:

>100_bases
TCTCCTTTGTTAGCTTATTTTTTTTATTATCTTTTTTATGGTAAAATAGTAGGGTGTTGAAAGCCTTTCAACAAAATTTC
TAAAAGAGGTATATATTTCC

Downstream 100 bases:

>100_bases
TCCTTTCTATAAGTTACTGACAGAATTGGCAGAGTCTCTCTATAAACTCTCAGAGTACAAAGAGACTCGACTTTTCACCA
GTAATTTTTTTATTGTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MMNMQSMMKQAQKLQKQMQVSQEEIANTTFVGKSAQDLVTVEFSGDRTLKSLNINPDVIDPEDPETLQDMVTDAVNDALS
QIEKVTEQKLGKFTKGLPF

Sequences:

>Translated_99_residues
MMNMQSMMKQAQKLQKQMQVSQEEIANTTFVGKSAQDLVTVEFSGDRTLKSLNINPDVIDPEDPETLQDMVTDAVNDALS
QIEKVTEQKLGKFTKGLPF
>Mature_99_residues
MMNMQSMMKQAQKLQKQMQVSQEEIANTTFVGKSAQDLVTVEFSGDRTLKSLNINPDVIDPEDPETLQDMVTDAVNDALS
QIEKVTEQKLGKFTKGLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=95, Percent_Identity=35.7894736842105, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y106_LACLS (Q032Z1)

Other databases:

- EMBL:   CP000425
- RefSeq:   YP_808153.1
- ProteinModelPortal:   Q032Z1
- SMR:   Q032Z1
- STRING:   Q032Z1
- GeneID:   4432506
- GenomeReviews:   CP000425_GR
- KEGG:   llc:LACR_0106
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   KYTKGLM
- ProtClustDB:   PRK00153
- BioCyc:   LLAC272622:LACR_0106-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11094; Mature: 11094

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNMQSMMKQAQKLQKQMQVSQEEIANTTFVGKSAQDLVTVEFSGDRTLKSLNINPDVID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCCCC
PEDPETLQDMVTDAVNDALSQIEKVTEQKLGKFTKGLPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMNMQSMMKQAQKLQKQMQVSQEEIANTTFVGKSAQDLVTVEFSGDRTLKSLNINPDVID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCCCC
PEDPETLQDMVTDAVNDALSQIEKVTEQKLGKFTKGLPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA