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The map label for this gene is yvdB [H]

Identifier: 125622943

GI number: 125622943

Start: 56870

End: 58492

Strand: Reverse

Name: yvdB [H]

Synonym: llmg_0063

Alternate gene names: 125622943

Gene position: 58492-56870 (Counterclockwise)

Preceding gene: 125622944

Following gene: 125622937

Centisome position: 2.31

GC content: 37.71

Gene sequence:

>1623_bases
ATGATTAAACAATTTTTAGGTATTATTAACTCAGAGTTCAAAGACTACAATCGACGAAAATTCTTGCAAGATTTGATGGC
AGGGATTACCGTAGCAGCCGTTGCTCTCCCCTTAGCCCTTGCTTTTGGTGTATCCAGTGGAACAACGGCAGCAGCCGGAC
TAATCACAGCGATTGTCGCGGGCCTAATTATTAGTTCCTTTTCTGGAGCCTTTTATCAAATCTCAGGCCCAACAGGAGCG
ATGGCCGCTATCTTAATTTCACTCATTGGCAAATACGGAATGAATGGAATTTTTATAGCCACTTTCATGGCTGGAATCTT
TCTCTTACTTGCTGGTATTTTCCGTTTAGGAAACCTTATCTCACTCATTCCATCTCCAGTCATTACAGGTTTTACTTCCG
GAATTGCAATCATTATTGCTAGCGGACAAATTAAAAACTTTTTCGGGATTGAACACTTTACAGGTTCTTTTTTTGATTTA
ATGAAATTTATCGGAGGGTTACATATTGATTATCCCTCAACAATTATTGGACTTTTAACGATTTTATTAATGATTTTTTA
TCCCAAATCATGGGGGAAAAAATTTCCAGCTTCTTTATTGGCTATCCTTCTTTCAACCCTTGCGGTCCTTGCTTTAAAAT
TAAATGTCCCAGTCGTAGGAAAAATCCCTACAACACTCATTCCCCAAGCACATCTTCGTTTAACTGAAATAAATCTTCAA
GATATGAAGACCCTCCTTATTCCAGCCATAAGCATCACCGTCCTTGGAATGACTGAAAGTCTCCTATGTGGAGCATCTGC
TGGACGTGCTACTAACCATCCAATGGATAATAACCAAGAACTTGTCGCTCAAGGAATTGGGAACATTTTTATCCCCTTCT
TCGGAGGTATTCCAGCCACAGCCGCAATCGCTCGAACAAGTGTGGCAATTAAGTCTGGAGCGCAAACTCGCTTAACTGGT
ATTATTCACGCGCTCATTTTACTTTTATCAATGTTCTTGTTTGCCCCATTTATGACACACATCCCACTCAGTGCCCTTGC
TGGTGTTCTTATCATGACTGCCCTAAGAATGAATGAATGGGAAGCAATTCGTTTCTTATTCAAAAATAAATTAAAGAGTG
GGATGATTGAGTTTTTTGTAACTATGATTATTACGGTTATTTTTGATTTGAGTACTGCAATCTTAGCCGGAATCATCGTT
GGCTTCTTACTTTTCATCTTAAAAATTTCCCAAATTGAAATTAACAGTTCTCAAATCGAACCCGAACGAATTAGTCAAAA
TCATCATGAAGTATTTAGCGAATGGACTGTCATTTATATCTCTGGCCCACTTTTCTTTTTAAATAGCAGTAAACTAAAAC
AGGTCATTGATGCCCTTCCTACAAACACAAACATTGTCCTCTCTCTAAGAGGTGTTCCAATGATTGATGTCACTTCCATT
AAGTTACTAATTGATATTTATAGCCTTTTCCATGAAGAAAATCGCCAAATTGTCTTTGCTTCAATGAATGGTAAATTAAA
AGAATCCTTTAGAAGAACAGGACTTATCAATCTGGTTGGTGAAGAAGCTATCTATCCAAGTGTCAATGAATTCCTTTTAG
ATTTGGTAGATAAAAAGAATTAA

Upstream 100 bases:

>100_bases
CTATCTAATCTTGATTTTATTTCGATTCCGATAATTATTTGATTAGATCACTTATCTCTGCTATCATAGAATATTGTGAT
AAAAAAATAAAGGAATTATT

Downstream 100 bases:

>100_bases
ATAAAAAAATAGACCCATGATATGGATCTATTTTTTTATTTATAAATCAATCAGTAATTGTTCTGATTGAATACATTGAA
AGAGACTTACTTTTATCTAG

Product: putative sulphate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MIKQFLGIINSEFKDYNRRKFLQDLMAGITVAAVALPLALAFGVSSGTTAAAGLITAIVAGLIISSFSGAFYQISGPTGA
MAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIPSPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDL
MKFIGGLHIDYPSTIIGLLTILLMIFYPKSWGKKFPASLLAILLSTLAVLALKLNVPVVGKIPTTLIPQAHLRLTEINLQ
DMKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPATAAIARTSVAIKSGAQTRLTG
IIHALILLLSMFLFAPFMTHIPLSALAGVLIMTALRMNEWEAIRFLFKNKLKSGMIEFFVTMIITVIFDLSTAILAGIIV
GFLLFILKISQIEINSSQIEPERISQNHHEVFSEWTVIYISGPLFFLNSSKLKQVIDALPTNTNIVLSLRGVPMIDVTSI
KLLIDIYSLFHEENRQIVFASMNGKLKESFRRTGLINLVGEEAIYPSVNEFLLDLVDKKN

Sequences:

>Translated_540_residues
MIKQFLGIINSEFKDYNRRKFLQDLMAGITVAAVALPLALAFGVSSGTTAAAGLITAIVAGLIISSFSGAFYQISGPTGA
MAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIPSPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDL
MKFIGGLHIDYPSTIIGLLTILLMIFYPKSWGKKFPASLLAILLSTLAVLALKLNVPVVGKIPTTLIPQAHLRLTEINLQ
DMKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPATAAIARTSVAIKSGAQTRLTG
IIHALILLLSMFLFAPFMTHIPLSALAGVLIMTALRMNEWEAIRFLFKNKLKSGMIEFFVTMIITVIFDLSTAILAGIIV
GFLLFILKISQIEINSSQIEPERISQNHHEVFSEWTVIYISGPLFFLNSSKLKQVIDALPTNTNIVLSLRGVPMIDVTSI
KLLIDIYSLFHEENRQIVFASMNGKLKESFRRTGLINLVGEEAIYPSVNEFLLDLVDKKN
>Mature_540_residues
MIKQFLGIINSEFKDYNRRKFLQDLMAGITVAAVALPLALAFGVSSGTTAAAGLITAIVAGLIISSFSGAFYQISGPTGA
MAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLISLIPSPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDL
MKFIGGLHIDYPSTIIGLLTILLMIFYPKSWGKKFPASLLAILLSTLAVLALKLNVPVVGKIPTTLIPQAHLRLTEINLQ
DMKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPATAAIARTSVAIKSGAQTRLTG
IIHALILLLSMFLFAPFMTHIPLSALAGVLIMTALRMNEWEAIRFLFKNKLKSGMIEFFVTMIITVIFDLSTAILAGIIV
GFLLFILKISQIEINSSQIEPERISQNHHEVFSEWTVIYISGPLFFLNSSKLKQVIDALPTNTNIVLSLRGVPMIDVTSI
KLLIDIYSLFHEENRQIVFASMNGKLKESFRRTGLINLVGEEAIYPSVNEFLLDLVDKKN

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI20336282, Length=489, Percent_Identity=21.6768916155419, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI16306483, Length=486, Percent_Identity=21.6049382716049, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4505697, Length=386, Percent_Identity=25.1295336787565, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI45827800, Length=487, Percent_Identity=21.5605749486653, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI39752683, Length=487, Percent_Identity=21.5605749486653, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI45827802, Length=439, Percent_Identity=21.8678815489749, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI269784651, Length=359, Percent_Identity=23.6768802228412, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI94721259, Length=432, Percent_Identity=20.8333333333333, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI262206105, Length=145, Percent_Identity=33.7931034482759, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI262206075, Length=145, Percent_Identity=33.7931034482759, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI262206069, Length=145, Percent_Identity=33.7931034482759, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI262206063, Length=145, Percent_Identity=33.7931034482759, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI94721253, Length=432, Percent_Identity=20.8333333333333, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI94721255, Length=432, Percent_Identity=20.8333333333333, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI94721257, Length=432, Percent_Identity=20.8333333333333, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI100913030, Length=451, Percent_Identity=23.5033259423503, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI16418457, Length=381, Percent_Identity=22.8346456692913, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI301601599, Length=381, Percent_Identity=22.8346456692913, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI47131207, Length=448, Percent_Identity=22.7678571428571, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI20336272, Length=448, Percent_Identity=22.7678571428571, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87081859, Length=576, Percent_Identity=31.9444444444444, Blast_Score=228, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI86564196, Length=614, Percent_Identity=22.4755700325733, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17551690, Length=578, Percent_Identity=21.280276816609, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17566848, Length=582, Percent_Identity=22.680412371134, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI86564876, Length=511, Percent_Identity=21.7221135029354, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI86565215, Length=543, Percent_Identity=22.6519337016575, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI193203292, Length=456, Percent_Identity=20.6140350877193, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562578, Length=639, Percent_Identity=21.5962441314554, Blast_Score=80, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6325260, Length=579, Percent_Identity=23.6614853195164, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6319771, Length=447, Percent_Identity=22.5950782997763, Blast_Score=90, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6323121, Length=472, Percent_Identity=24.1525423728814, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24649801, Length=550, Percent_Identity=23.8181818181818, Blast_Score=118, Evalue=9e-27,
Organism=Drosophila melanogaster, GI85815873, Length=415, Percent_Identity=27.2289156626506, Blast_Score=115, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19922482, Length=479, Percent_Identity=25.678496868476, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24651449, Length=538, Percent_Identity=21.5613382899628, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21358229, Length=452, Percent_Identity=27.4336283185841, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI21358633, Length=445, Percent_Identity=22.247191011236, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24666186, Length=355, Percent_Identity=26.1971830985915, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21355087, Length=148, Percent_Identity=36.4864864864865, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24647160, Length=148, Percent_Identity=36.4864864864865, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24663084, Length=478, Percent_Identity=25.5230125523013, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21357695, Length=478, Percent_Identity=25.5230125523013, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 58589; Mature: 58589

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQFLGIINSEFKDYNRRKFLQDLMAGITVAAVALPLALAFGVSSGTTAAAGLITAIVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GLIISSFSGAFYQISGPTGAMAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLI
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLIPSPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDLMKFIGGLHIDYPSTIIGLLT
HHCCCHHHHHHCCCEEEEEECCCCCHHHCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH
ILLMIFYPKSWGKKFPASLLAILLSTLAVLALKLNVPVVGKIPTTLIPQAHLRLTEINLQ
HHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEECCHH
DMKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPAT
HHHHHHHHHHHHHEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHCCCCCHH
AAIARTSVAIKSGAQTRLTGIIHALILLLSMFLFAPFMTHIPLSALAGVLIMTALRMNEW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH
EAIRFLFKNKLKSGMIEFFVTMIITVIFDLSTAILAGIIVGFLLFILKISQIEINSSQIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
PERISQNHHEVFSEWTVIYISGPLFFLNSSKLKQVIDALPTNTNIVLSLRGVPMIDVTSI
HHHHCCHHHHHHHCCEEEEEECCEEEECCHHHHHHHHHCCCCCEEEEEECCCCEEEHHHH
KLLIDIYSLFHEENRQIVFASMNGKLKESFRRTGLINLVGEEAIYPSVNEFLLDLVDKKN
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIKQFLGIINSEFKDYNRRKFLQDLMAGITVAAVALPLALAFGVSSGTTAAAGLITAIVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GLIISSFSGAFYQISGPTGAMAAILISLIGKYGMNGIFIATFMAGIFLLLAGIFRLGNLI
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLIPSPVITGFTSGIAIIIASGQIKNFFGIEHFTGSFFDLMKFIGGLHIDYPSTIIGLLT
HHCCCHHHHHHCCCEEEEEECCCCCHHHCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHH
ILLMIFYPKSWGKKFPASLLAILLSTLAVLALKLNVPVVGKIPTTLIPQAHLRLTEINLQ
HHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEECCHH
DMKTLLIPAISITVLGMTESLLCGASAGRATNHPMDNNQELVAQGIGNIFIPFFGGIPAT
HHHHHHHHHHHHHEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEHHHCCCCCHH
AAIARTSVAIKSGAQTRLTGIIHALILLLSMFLFAPFMTHIPLSALAGVLIMTALRMNEW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH
EAIRFLFKNKLKSGMIEFFVTMIITVIFDLSTAILAGIIVGFLLFILKISQIEINSSQIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
PERISQNHHEVFSEWTVIYISGPLFFLNSSKLKQVIDALPTNTNIVLSLRGVPMIDVTSI
HHHHCCHHHHHHHCCEEEEEECCEEEECCHHHHHHHHHCCCCCEEEEEECCCCEEEHHHH
KLLIDIYSLFHEENRQIVFASMNGKLKESFRRTGLINLVGEEAIYPSVNEFLLDLVDKKN
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]