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The map label for this gene is hslR [C]

Identifier: 125622896

GI number: 125622896

Start: 18862

End: 19131

Strand: Direct

Name: hslR [C]

Synonym: llmg_0015

Alternate gene names: 125622896

Gene position: 18862-19131 (Clockwise)

Preceding gene: 125622895

Following gene: 125622897

Centisome position: 0.75

GC content: 34.07

Gene sequence:

>270_bases
ATGAGATTAGATAAGTTTTTAAAAGTTTCGCGCTTGATTAAACGTCGTCCAGTTGCGAAAGAAGTTGCCGACAAAGGTCG
GATTAAAATTAATGGAAAGTTAGCGAAATCTTCGTCCGATGTAAAATTCAATGATACGATTGAAATCCGTTTTGGAAATA
AAATCGTTGAAGTTCGAGTGACTGAACTAAAAGAATTTACACGTAAAGAAGATGCTGATAAAATGTATGAACTCATCAGT
GAAACACGCATAACAGAAGAAATAGAATGA

Upstream 100 bases:

>100_bases
ATCTGTCAGTAAAATAATAAAGTTCTGTCATTACTGATAGAGCTTTATTATTATAAATAAAGGCATTTTCAAACAAAATG
AAATATGTTATAATCTATCC

Downstream 100 bases:

>100_bases
TTATCATCACAAAGTGGATTGGAGGGTGTCATGGCAAAACAAGTGATTCAACTAAATAATAAATATAGTCAAAATCAGAA
AAAAAGAAATCTAACAGTAG

Product: putative RNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MRLDKFLKVSRLIKRRPVAKEVADKGRIKINGKLAKSSSDVKFNDTIEIRFGNKIVEVRVTELKEFTRKEDADKMYELIS
ETRITEEIE

Sequences:

>Translated_89_residues
MRLDKFLKVSRLIKRRPVAKEVADKGRIKINGKLAKSSSDVKFNDTIEIRFGNKIVEVRVTELKEFTRKEDADKMYELIS
ETRITEEIE
>Mature_89_residues
MRLDKFLKVSRLIKRRPVAKEVADKGRIKINGKLAKSSSDVKFNDTIEIRFGNKIVEVRVTELKEFTRKEDADKMYELIS
ETRITEEIE

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 10442; Mature: 10442

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDKFLKVSRLIKRRPVAKEVADKGRIKINGKLAKSSSDVKFNDTIEIRFGNKIVEVRV
CCHHHHHHHHHHHHCCCCHHHHHCCCEEEECCEEECCCCCCEECCEEEEEECCEEEEEEH
TELKEFTRKEDADKMYELISETRITEEIE
HHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLDKFLKVSRLIKRRPVAKEVADKGRIKINGKLAKSSSDVKFNDTIEIRFGNKIVEVRV
CCHHHHHHHHHHHHCCCCHHHHHCCCEEEECCEEECCCCCCEECCEEEEEECCEEEEEEH
TELKEFTRKEDADKMYELISETRITEEIE
HHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]