| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486560
Identifier: 124486560
GI number: 124486560
Start: 1795554
End: 1796486
Strand: Reverse
Name: 124486560
Synonym: Mlab_1748
Alternate gene names: NA
Gene position: 1796486-1795554 (Counterclockwise)
Preceding gene: 124486567
Following gene: 124486557
Centisome position: 99.53
GC content: 42.55
Gene sequence:
>933_bases TTGATCGAGTGTGCTCAGTATCGGAGGATCGAAGAATGGAATCTGGCGTATGAGAAATATCTGAAATCTGAATGGGAGAG GATTCTTCCAGATGAGGGATATAATTTGGAAAATATTGGGAAATTGTTTTATTATGGTTCTGGTTTTGTACGACCTGGTT TTCAATGTAAGGATTTTACCAATGCAATTCAGGAGGGAGCCGATTTCTCTAGTGCACATCTTTATGGAGCCGATTTCTCT AGTGCACATCTTTATGGAGCCGATTTCACTTATGCATCTCTTTATGAAGCCGATTTTATATGTTCACATCTTGAGGACAC CAATTTATTTGAGACAATTCTTTATGGAGCCAATTTATCATGGGCATCGCTTATTGGAGCCGATTTTATATGTTCACATC TTGAACGAGCAATTTTTCACTTCTCTATAGTAAATGGTGAGACCCAATTTACAAATAGCACCATAGATGATAAAACAGAT TTCACCGGGACTTCTCTTTCATCGGCCCGCATCGAACCGGAACTTAGAACCAAGCTTGAGAGAAACATCCGGCAGATACG CTGGGAAGAATGGTATAATGATAATAAACTGCTCGAGATACCGGCGAGAATATTCTGGAAAATTTCCGATTACGGCAGCA GCACTCGTGCAATTTTGTTCACCTTTTTATTTTCGAATGTTATCTTCATGATGTTCTATCTTGCACTTCGCGATGCGGGT CTCCTGGAAGGATCGATCCTTTCCTCAGGGAACGATCTCCTCTTAGCCTACATGCAGACGACGCTTGTCCCCTTCGGCAT TTTGGGCATTGACCTTACGACCCTCTCGCTCTTTCCCGTATTCATCATCTTCCTTCAGGTGATTTTCGGCTACACCATTC TCGCAGCTTTGGTCACCAGAATGGCGATCATGTTCCAGAACCTGAGTCCCTAG
Upstream 100 bases:
>100_bases TTATATGGTCAGGTGGCCACTCTATGATATTATGGGGAATGAGAATGAAAGACCGAAAGGTTGGAATAAGGAATTATATG ATAAGCTGAGTTTTGAATAT
Downstream 100 bases:
>100_bases ACTCTTTTTTTCACGAGACTCTATAGAGAATAAAAGGAGGATATTTTCACGGTGGTCTCGATCTGAAAAAAAGAGGCGGG TATGCTTGGATGCATGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Ion Transport 2 Domain Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MIECAQYRRIEEWNLAYEKYLKSEWERILPDEGYNLENIGKLFYYGSGFVRPGFQCKDFTNAIQEGADFSSAHLYGADFS SAHLYGADFTYASLYEADFICSHLEDTNLFETILYGANLSWASLIGADFICSHLERAIFHFSIVNGETQFTNSTIDDKTD FTGTSLSSARIEPELRTKLERNIRQIRWEEWYNDNKLLEIPARIFWKISDYGSSTRAILFTFLFSNVIFMMFYLALRDAG LLEGSILSSGNDLLLAYMQTTLVPFGILGIDLTTLSLFPVFIIFLQVIFGYTILAALVTRMAIMFQNLSP
Sequences:
>Translated_310_residues MIECAQYRRIEEWNLAYEKYLKSEWERILPDEGYNLENIGKLFYYGSGFVRPGFQCKDFTNAIQEGADFSSAHLYGADFS SAHLYGADFTYASLYEADFICSHLEDTNLFETILYGANLSWASLIGADFICSHLERAIFHFSIVNGETQFTNSTIDDKTD FTGTSLSSARIEPELRTKLERNIRQIRWEEWYNDNKLLEIPARIFWKISDYGSSTRAILFTFLFSNVIFMMFYLALRDAG LLEGSILSSGNDLLLAYMQTTLVPFGILGIDLTTLSLFPVFIIFLQVIFGYTILAALVTRMAIMFQNLSP >Mature_310_residues MIECAQYRRIEEWNLAYEKYLKSEWERILPDEGYNLENIGKLFYYGSGFVRPGFQCKDFTNAIQEGADFSSAHLYGADFS SAHLYGADFTYASLYEADFICSHLEDTNLFETILYGANLSWASLIGADFICSHLERAIFHFSIVNGETQFTNSTIDDKTD FTGTSLSSARIEPELRTKLERNIRQIRWEEWYNDNKLLEIPARIFWKISDYGSSTRAILFTFLFSNVIFMMFYLALRDAG LLEGSILSSGNDLLLAYMQTTLVPFGILGIDLTTLSLFPVFIIFLQVIFGYTILAALVTRMAIMFQNLSP
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35505; Mature: 35505
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIECAQYRRIEEWNLAYEKYLKSEWERILPDEGYNLENIGKLFYYGSGFVRPGFQCKDFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCCCCCCHHHHH NAIQEGADFSSAHLYGADFSSAHLYGADFTYASLYEADFICSHLEDTNLFETILYGANLS HHHHCCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH WASLIGADFICSHLERAIFHFSIVNGETQFTNSTIDDKTDFTGTSLSSARIEPELRTKLE HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHH RNIRQIRWEEWYNDNKLLEIPARIFWKISDYGSSTRAILFTFLFSNVIFMMFYLALRDAG HHHHHHHHHHHCCCCCEEEECHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC LLEGSILSSGNDLLLAYMQTTLVPFGILGIDLTTLSLFPVFIIFLQVIFGYTILAALVTR CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAIMFQNLSP HHHHHHCCCC >Mature Secondary Structure MIECAQYRRIEEWNLAYEKYLKSEWERILPDEGYNLENIGKLFYYGSGFVRPGFQCKDFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCCCCCCHHHHH NAIQEGADFSSAHLYGADFSSAHLYGADFTYASLYEADFICSHLEDTNLFETILYGANLS HHHHCCCCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH WASLIGADFICSHLERAIFHFSIVNGETQFTNSTIDDKTDFTGTSLSSARIEPELRTKLE HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHH RNIRQIRWEEWYNDNKLLEIPARIFWKISDYGSSTRAILFTFLFSNVIFMMFYLALRDAG HHHHHHHHHHHCCCCCEEEECHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC LLEGSILSSGNDLLLAYMQTTLVPFGILGIDLTTLSLFPVFIIFLQVIFGYTILAALVTR CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAIMFQNLSP HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA