Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486542

Identifier: 124486542

GI number: 124486542

Start: 1776739

End: 1777170

Strand: Reverse

Name: 124486542

Synonym: Mlab_1730

Alternate gene names: NA

Gene position: 1777170-1776739 (Counterclockwise)

Preceding gene: 124486543

Following gene: 124486541

Centisome position: 98.46

GC content: 39.35

Gene sequence:

>432_bases
ATGAACACTAAAAAAAGTATACTCATTATCGTCGTGTGTATAGTGGGGCTGATATGTGCCTCTGCGATTTGGTTTTCAGT
ATTTGGTCTTCCGTTTACTGAGACAAAACCGCAAATACAGCACCCGATAAATATCGACATAACATTTCCGACAGAAGGGG
GGACAGTAAACTATGATGTTGTTCCGGCAGGCCATGGGGTTTTTGGAACAATCCTTTCGGATTATGAAATAGAATCAGCA
TATGTCAAGAGTTTTGGTTACGGTGAACCGGAATTAACAAAAATAACATCATATACAGGTATGCTTTGTGGAGTTCCGAC
AACACCTGGAAAAACAAACATTACAGTTGTTGTTACTGATGTTAAAGGAAACACAGCAGAAAAGACGATTAACTTTACTG
TAATAACAGGTCCGCCTGCTCCTCCAAAATAA

Upstream 100 bases:

>100_bases
TCAAGGACGAATTGGTAATTATGGTATTACAGTAGATTCTACAATATCATAAATAGATTTAATAGCTATTGCTCCTTGGG
GTTAGATTAGAAAGATATCT

Downstream 100 bases:

>100_bases
AAATAGCAAAGCTGTTTGGATATTATTTCCATTGACATCAAACTTTTTTAATAAAAACCAAATTACAAAAATTCGCTGAA
GAATGAGATCGAGATTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNTKKSILIIVVCIVGLICASAIWFSVFGLPFTETKPQIQHPINIDITFPTEGGTVNYDVVPAGHGVFGTILSDYEIESA
YVKSFGYGEPELTKITSYTGMLCGVPTTPGKTNITVVVTDVKGNTAEKTINFTVITGPPAPPK

Sequences:

>Translated_143_residues
MNTKKSILIIVVCIVGLICASAIWFSVFGLPFTETKPQIQHPINIDITFPTEGGTVNYDVVPAGHGVFGTILSDYEIESA
YVKSFGYGEPELTKITSYTGMLCGVPTTPGKTNITVVVTDVKGNTAEKTINFTVITGPPAPPK
>Mature_143_residues
MNTKKSILIIVVCIVGLICASAIWFSVFGLPFTETKPQIQHPINIDITFPTEGGTVNYDVVPAGHGVFGTILSDYEIESA
YVKSFGYGEPELTKITSYTGMLCGVPTTPGKTNITVVVTDVKGNTAEKTINFTVITGPPAPPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15253; Mature: 15253

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKKSILIIVVCIVGLICASAIWFSVFGLPFTETKPQIQHPINIDITFPTEGGTVNYDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
VPAGHGVFGTILSDYEIESAYVKSFGYGEPELTKITSYTGMLCGVPTTPGKTNITVVVTD
EECCCCEEEEEECCCCCCHHHHHHCCCCCCCCEEEECCCCEEECCCCCCCCCEEEEEEEE
VKGNTAEKTINFTVITGPPAPPK
CCCCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MNTKKSILIIVVCIVGLICASAIWFSVFGLPFTETKPQIQHPINIDITFPTEGGTVNYDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEE
VPAGHGVFGTILSDYEIESAYVKSFGYGEPELTKITSYTGMLCGVPTTPGKTNITVVVTD
EECCCCEEEEEECCCCCCHHHHHHCCCCCCCCEEEECCCCEEECCCCCCCCCEEEEEEEE
VKGNTAEKTINFTVITGPPAPPK
CCCCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA