| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is iorA [H]
Identifier: 124486457
GI number: 124486457
Start: 1672234
End: 1674018
Strand: Reverse
Name: iorA [H]
Synonym: Mlab_1645
Alternate gene names: 124486457
Gene position: 1674018-1672234 (Counterclockwise)
Preceding gene: 124486458
Following gene: 124486456
Centisome position: 92.75
GC content: 56.47
Gene sequence:
>1785_bases ATGGCAGAAGAGACACCCAAGAAATACCTCCTTGGAAACGACGCTATCGCCCATGCTTGTCTCGAAGCGGGCATCGACTT TGTTTCCGGGTATCCCGGGACCCCGTCATCCGAGGTTGTTGACCGACTGCGTGCCGAAAAAAACCCCTGGTACTACTTAG AATGGTCAGTTAACGAAAAAGTCGCGTTCGAAAATGCTCTGGCCGCAAGCTGGTGCGGCCTTCGGTCGATCGTCACCATG AAGCACGTCGGTCTGAACGTTGCGGCCGATCCCCTTATGACCTCGTCCTACACCGGGACGAAAGGCGGCTTCGTCGTTCT TTCAGCCGACGACCCGTTCGCGCACAGTTCTCAGAACGAACAGGACTCGAGGATGTACGCGAAGTTTGCTCAGATCCCGT GCCTGGATCCCTCTTCCGCCCAGGAAGCGCATGACTTTGCCAAGTCTGCGTTCGAACTCTCCGAAAAGTTCGCGCTTCCC GTTCTTCTTCGTCCAACGACAAGGATCTGCCACTCGAAAGGGGATGTCCGTCTCGGCGAGCCTTCGCCCTCGCCCCGGAA AGGCGAGTTTGTCAAAAATCCGAAACAGTACGTCGTGATCCCGGCACACACCCGTCCGCTGCATGTCGCCCTCACGAAAA AACAACCCGAGGTCGCAAAATATCTGGTGGAGGCAGGTCTCAACTCTGCAGAGATCCGCGGGAAAAAGGCCGTCATCGCC GGAGGCATCTCCATCTCCTATGTCGAGGAGATCATCCCTGATGACGTTTCGTTCATCAAAATCAGCGCATATCCGATCGA CCGGAACTGGCTTGCGGAGATCCTTGCAAAACACACCGAGGTTCTCGTTGTGGAAGAGCTTATGCCGGTCATCGAAGAAG CGGCACTCCAGGCCGCATCCTCGACGGTCGTTCACGGAAAACTCGACGGCTATCTGCCTCACGAGGGAGAATACTCCCCT GAACTGATCGCCGGAGCATTTGAAAAGGCAGGTTTTGCGAAAAACACCTACCCGGTCCCGCCGGAAGTGACCCAGGTCGC GGTCCGTCCGCCGATTCTCTGTGCGGGATGTCTCCACCGCTCGGTCTTCTACGCAATGAAAAAGGTCTTCAAAGACGGTG TATTCCCATCCGACATCGGCTGTTATACGCTCGGTCTCCAGCTCGGCGCGGTCGACACGACGATCTGTATGGGTGCTTCG ATCACGGTCGGCTCGGGAATCGCCCACTCCTGCCCGGGAACTGACGTGGTCTCCACGATAGGCGACTCGACTTTCCTCCA CACGGGTGTGAACGGTCTTATCAACGCGGTGTACAATAATACGAACCAGATCGTGATCATTCTGGATAACCGGATCACCG CAATGACCGGTCACCAGCCCAATCCGAACACCGGTCTGACCGCGACCGGTGAGGAGTCGCCGAAGATCTCGCTCGAAGAA CTTGCGAGAGCCTGTGGTGTCGCGTATGTTGAATCGGTCGATCCATATGATCTGACCTATCTTCTTGCCACTCTCCGGGA AGCAAAGGAAAAACCCGGCGTCAAGGTCATCATCGCCAAACAGCCCTGCGTTATCATGAACAAACGGCTCGGGATCAAAA GAAACCGGTATGTCGTGGATGCAGAAGCTTGTACGAAATGCGGGGCATGCCTGAGGTATGGATGCCCGGCGATCGAGACC GATGAGACCGGCGCTGCCAAGATCACCGCTCTTTGTACCGGCTGCGGCGTCTGTGCGGATATCTGTCCAACCGGCGCGAT CCACCGAGGAGGTGCGAGACAATGA
Upstream 100 bases:
>100_bases ACCTTACTACATAGGATGTGGCCGTATAAATATGTTCTGAAATTCATTTCCTGCCTTTGACGTAGGCTTATTCTCTTATC ATGCCAAACATTATGGAGAT
Downstream 100 bases:
>100_bases AGAAGAGTTTTGATGTTCTGATCGTCGGTATCGGCGGACAGGGAACGATCCTTGCCTCGAATGTTCTGGGCGATGCCTGT GTGATCGAGGGTCGTCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MAEETPKKYLLGNDAIAHACLEAGIDFVSGYPGTPSSEVVDRLRAEKNPWYYLEWSVNEKVAFENALAASWCGLRSIVTM KHVGLNVAADPLMTSSYTGTKGGFVVLSADDPFAHSSQNEQDSRMYAKFAQIPCLDPSSAQEAHDFAKSAFELSEKFALP VLLRPTTRICHSKGDVRLGEPSPSPRKGEFVKNPKQYVVIPAHTRPLHVALTKKQPEVAKYLVEAGLNSAEIRGKKAVIA GGISISYVEEIIPDDVSFIKISAYPIDRNWLAEILAKHTEVLVVEELMPVIEEAALQAASSTVVHGKLDGYLPHEGEYSP ELIAGAFEKAGFAKNTYPVPPEVTQVAVRPPILCAGCLHRSVFYAMKKVFKDGVFPSDIGCYTLGLQLGAVDTTICMGAS ITVGSGIAHSCPGTDVVSTIGDSTFLHTGVNGLINAVYNNTNQIVIILDNRITAMTGHQPNPNTGLTATGEESPKISLEE LARACGVAYVESVDPYDLTYLLATLREAKEKPGVKVIIAKQPCVIMNKRLGIKRNRYVVDAEACTKCGACLRYGCPAIET DETGAAKITALCTGCGVCADICPTGAIHRGGARQ
Sequences:
>Translated_594_residues MAEETPKKYLLGNDAIAHACLEAGIDFVSGYPGTPSSEVVDRLRAEKNPWYYLEWSVNEKVAFENALAASWCGLRSIVTM KHVGLNVAADPLMTSSYTGTKGGFVVLSADDPFAHSSQNEQDSRMYAKFAQIPCLDPSSAQEAHDFAKSAFELSEKFALP VLLRPTTRICHSKGDVRLGEPSPSPRKGEFVKNPKQYVVIPAHTRPLHVALTKKQPEVAKYLVEAGLNSAEIRGKKAVIA GGISISYVEEIIPDDVSFIKISAYPIDRNWLAEILAKHTEVLVVEELMPVIEEAALQAASSTVVHGKLDGYLPHEGEYSP ELIAGAFEKAGFAKNTYPVPPEVTQVAVRPPILCAGCLHRSVFYAMKKVFKDGVFPSDIGCYTLGLQLGAVDTTICMGAS ITVGSGIAHSCPGTDVVSTIGDSTFLHTGVNGLINAVYNNTNQIVIILDNRITAMTGHQPNPNTGLTATGEESPKISLEE LARACGVAYVESVDPYDLTYLLATLREAKEKPGVKVIIAKQPCVIMNKRLGIKRNRYVVDAEACTKCGACLRYGCPAIET DETGAAKITALCTGCGVCADICPTGAIHRGGARQ >Mature_593_residues AEETPKKYLLGNDAIAHACLEAGIDFVSGYPGTPSSEVVDRLRAEKNPWYYLEWSVNEKVAFENALAASWCGLRSIVTMK HVGLNVAADPLMTSSYTGTKGGFVVLSADDPFAHSSQNEQDSRMYAKFAQIPCLDPSSAQEAHDFAKSAFELSEKFALPV LLRPTTRICHSKGDVRLGEPSPSPRKGEFVKNPKQYVVIPAHTRPLHVALTKKQPEVAKYLVEAGLNSAEIRGKKAVIAG GISISYVEEIIPDDVSFIKISAYPIDRNWLAEILAKHTEVLVVEELMPVIEEAALQAASSTVVHGKLDGYLPHEGEYSPE LIAGAFEKAGFAKNTYPVPPEVTQVAVRPPILCAGCLHRSVFYAMKKVFKDGVFPSDIGCYTLGLQLGAVDTTICMGASI TVGSGIAHSCPGTDVVSTIGDSTFLHTGVNGLINAVYNNTNQIVIILDNRITAMTGHQPNPNTGLTATGEESPKISLEEL ARACGVAYVESVDPYDLTYLLATLREAKEKPGVKVIIAKQPCVIMNKRLGIKRNRYVVDAEACTKCGACLRYGCPAIETD ETGAAKITALCTGCGVCADICPTGAIHRGGARQ
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 63802; Mature: 63670
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00589 PTS_HPR_SER ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEETPKKYLLGNDAIAHACLEAGIDFVSGYPGTPSSEVVDRLRAEKNPWYYLEWSVNEK CCCCCCCHHCCCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCC VAFENALAASWCGLRSIVTMKHVGLNVAADPLMTSSYTGTKGGFVVLSADDPFAHSSQNE HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC QDSRMYAKFAQIPCLDPSSAQEAHDFAKSAFELSEKFALPVLLRPTTRICHSKGDVRLGE HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCCEEECC PSPSPRKGEFVKNPKQYVVIPAHTRPLHVALTKKQPEVAKYLVEAGLNSAEIRGKKAVIA CCCCCCCCCHHCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCHHHCCCCEEEEE GGISISYVEEIIPDDVSFIKISAYPIDRNWLAEILAKHTEVLVVEELMPVIEEAALQAAS CCCHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHC STVVHGKLDGYLPHEGEYSPELIAGAFEKAGFAKNTYPVPPEVTQVAVRPPILCAGCLHR CEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCHHHHHHHHH SVFYAMKKVFKDGVFPSDIGCYTLGLQLGAVDTTICMGASITVGSGIAHSCPGTDVVSTI HHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHCCCCEEECCCCCCCCCCCHHHHHC GDSTFLHTGVNGLINAVYNNTNQIVIILDNRITAMTGHQPNPNTGLTATGEESPKISLEE CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCEEECCCCCCCCCHHH LARACGVAYVESVDPYDLTYLLATLREAKEKPGVKVIIAKQPCVIMNKRLGIKRNRYVVD HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCCEEEE AEACTKCGACLRYGCPAIETDETGAAKITALCTGCGVCADICPTGAIHRGGARQ HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AEETPKKYLLGNDAIAHACLEAGIDFVSGYPGTPSSEVVDRLRAEKNPWYYLEWSVNEK CCCCCCHHCCCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCC VAFENALAASWCGLRSIVTMKHVGLNVAADPLMTSSYTGTKGGFVVLSADDPFAHSSQNE HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC QDSRMYAKFAQIPCLDPSSAQEAHDFAKSAFELSEKFALPVLLRPTTRICHSKGDVRLGE HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCCEEECC PSPSPRKGEFVKNPKQYVVIPAHTRPLHVALTKKQPEVAKYLVEAGLNSAEIRGKKAVIA CCCCCCCCCHHCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCHHHCCCCEEEEE GGISISYVEEIIPDDVSFIKISAYPIDRNWLAEILAKHTEVLVVEELMPVIEEAALQAAS CCCHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHC STVVHGKLDGYLPHEGEYSPELIAGAFEKAGFAKNTYPVPPEVTQVAVRPPILCAGCLHR CEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCHHHHHHHHH SVFYAMKKVFKDGVFPSDIGCYTLGLQLGAVDTTICMGASITVGSGIAHSCPGTDVVSTI HHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHCCCCEEECCCCCCCCCCCHHHHHC GDSTFLHTGVNGLINAVYNNTNQIVIILDNRITAMTGHQPNPNTGLTATGEESPKISLEE CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCEEECCCCCCCCCHHH LARACGVAYVESVDPYDLTYLLATLREAKEKPGVKVIIAKQPCVIMNKRLGIKRNRYVVD HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCCEEEE AEACTKCGACLRYGCPAIETDETGAAKITALCTGCGVCADICPTGAIHRGGARQ HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]