| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486455
Identifier: 124486455
GI number: 124486455
Start: 1670800
End: 1671525
Strand: Reverse
Name: 124486455
Synonym: Mlab_1643
Alternate gene names: NA
Gene position: 1671525-1670800 (Counterclockwise)
Preceding gene: 124486456
Following gene: 124486454
Centisome position: 92.61
GC content: 46.69
Gene sequence:
>726_bases ATGTTACAAAAATCCGTCACTATACAGAATGAAAACATCAGGATCCCGGCAATTTTGTGGGGGGAAAATACGGGAAAGCT CTATATTGCCGTGCACGGCAGTATGTCGAATAAAGAGGATGACGTCATCGCGGTTTTTGCAGAGGAAGCGGTCGAAAAGG GCTATCAGGTCCTGAGTTTCGATCTTCCGGAACACGGTGACCGGTCAAACGAGCCGTATCTCTGCAAACCGGATCCTTGC GTAAGCGATCTTACGGCGGTGTATCAGTATGCCAGGTCTATCACTAATCATATCAGTTTTTTCGGCTGCAGCATGGGTGT TTATTTCGGCCTGTTGGCCTATTCCGGCATGCCGATCGAAAAAAGCCTGTTTCTCTCGCCTCTGGTCGATATGGAGCGGA TCATCGACGGTCTGATGACGAGTTTCCATATTTCAGAGAAAACGCTGGAAGAAAAACAGGAGATCGTGCTGCCGATCGGC ATAACGCTTTACTGGGATTACTACTGTTATGTGAAAACGCACCCAATCGGTTCCTGGAATGTACCGACACGGATACTCTA CGGGGAACATGATGATATGATTCCTTTTGATGAAGTGTCCGCTTTTGCAGAGAAAAACTCAGCAGTCCTTGACGTCGCGA AAGGGGCAGAACATTATTTCCATACGGAAGAACAACTGGGATCTTTTAGAAACTGGCTGAAAAAGAGTATTGATTGCGCA AAATAA
Upstream 100 bases:
>100_bases ATCCTTTTCTGCGTCTCTGCCTCTCCACGCAAAACGTGGATGTATTTTACATTGAAAATCGTACAGATAGATATATCAAA TATTTTAGGCAGGCGATTAT
Downstream 100 bases:
>100_bases TATAACCATCAATTTTTCTTATGATTATTCTCTGTTGAGCTGCTATTCATATTGGAATTCCCGCTGTTTTGGAAAAAAAG TGGATTTTCAGAGAATTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MLQKSVTIQNENIRIPAILWGENTGKLYIAVHGSMSNKEDDVIAVFAEEAVEKGYQVLSFDLPEHGDRSNEPYLCKPDPC VSDLTAVYQYARSITNHISFFGCSMGVYFGLLAYSGMPIEKSLFLSPLVDMERIIDGLMTSFHISEKTLEEKQEIVLPIG ITLYWDYYCYVKTHPIGSWNVPTRILYGEHDDMIPFDEVSAFAEKNSAVLDVAKGAEHYFHTEEQLGSFRNWLKKSIDCA K
Sequences:
>Translated_241_residues MLQKSVTIQNENIRIPAILWGENTGKLYIAVHGSMSNKEDDVIAVFAEEAVEKGYQVLSFDLPEHGDRSNEPYLCKPDPC VSDLTAVYQYARSITNHISFFGCSMGVYFGLLAYSGMPIEKSLFLSPLVDMERIIDGLMTSFHISEKTLEEKQEIVLPIG ITLYWDYYCYVKTHPIGSWNVPTRILYGEHDDMIPFDEVSAFAEKNSAVLDVAKGAEHYFHTEEQLGSFRNWLKKSIDCA K >Mature_241_residues MLQKSVTIQNENIRIPAILWGENTGKLYIAVHGSMSNKEDDVIAVFAEEAVEKGYQVLSFDLPEHGDRSNEPYLCKPDPC VSDLTAVYQYARSITNHISFFGCSMGVYFGLLAYSGMPIEKSLFLSPLVDMERIIDGLMTSFHISEKTLEEKQEIVLPIG ITLYWDYYCYVKTHPIGSWNVPTRILYGEHDDMIPFDEVSAFAEKNSAVLDVAKGAEHYFHTEEQLGSFRNWLKKSIDCA K
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27339; Mature: 27339
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQKSVTIQNENIRIPAILWGENTGKLYIAVHGSMSNKEDDVIAVFAEEAVEKGYQVLSF CCCCCEEEECCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHCCCEEEEE DLPEHGDRSNEPYLCKPDPCVSDLTAVYQYARSITNHISFFGCSMGVYFGLLAYSGMPIE CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KSLFLSPLVDMERIIDGLMTSFHISEKTLEEKQEIVLPIGITLYWDYYCYVKTHPIGSWN HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEEEEEEEEEEEECCCCCCC VPTRILYGEHDDMIPFDEVSAFAEKNSAVLDVAKGAEHYFHTEEQLGSFRNWLKKSIDCA CCEEEEECCCCCCCCHHHHHHHHHCCCCEEEHHHCHHHHCCCHHHHHHHHHHHHHHCCCC K C >Mature Secondary Structure MLQKSVTIQNENIRIPAILWGENTGKLYIAVHGSMSNKEDDVIAVFAEEAVEKGYQVLSF CCCCCEEEECCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHCCCEEEEE DLPEHGDRSNEPYLCKPDPCVSDLTAVYQYARSITNHISFFGCSMGVYFGLLAYSGMPIE CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KSLFLSPLVDMERIIDGLMTSFHISEKTLEEKQEIVLPIGITLYWDYYCYVKTHPIGSWN HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEEEEEEEEEEEECCCCCCC VPTRILYGEHDDMIPFDEVSAFAEKNSAVLDVAKGAEHYFHTEEQLGSFRNWLKKSIDCA CCEEEEECCCCCCCCHHHHHHHHHCCCCEEEHHHCHHHHCCCHHHHHHHHHHHHHHCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA