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The map label for this gene is mcrC [H]

Identifier: 124486378

GI number: 124486378

Start: 1596474

End: 1597097

Strand: Reverse

Name: mcrC [H]

Synonym: Mlab_1563

Alternate gene names: 124486378

Gene position: 1597097-1596474 (Counterclockwise)

Preceding gene: 124486379

Following gene: 124486377

Centisome position: 88.48

GC content: 50.0

Gene sequence:

>624_bases
ATGCCTCTTGGTCGTGTAACACAACTCGTCGATTGCAGACAGAGTATGGGTATGGGTAAGGGGGGATCTCTTGCTCAGAG
GGGAACCATCTCTGAATGTAAAAATCCTGATGTCATCATCGTGGGCATGTCTCCAGGACGGAGGCATATCACAAAACCTG
TCTGCGATATTACGTCAGCACTGCGGCAGCAGGGGATCGAATACAGCGTAAGTACCTTGGTGCTGAACGCAGGCAGCGGC
GTCCCGCCTGATGCGGATATCGGCGGGGTATCACTCGGCTCAAATTTCGGAATTCTCGATCGCGAGATAGAACAGATAGA
ACGCCATAAAGTGGCTGTTCTTCACCACGGTAACATACGGTCTCATGTGGTCCACAAATCAAGGAAGATCCTGCAGGAAT
GCAACGTAAATGCCGTTGTTGTCTGTCAGGCTCCTGTTGATTATGAGGATCTTGCAAAAGCCGGAGTTAAGACCGCGTAC
GTCATGCCAAAACCAGACGACATTCGGACCAAAGGCACAGTAATGGGACTTGTTACCGGCATCACCCGGGGACAGACGCC
AAGTCGTGTGGCCATGTCAGATGTCATTCATGAAGTACTCAGAATAATCAAATCTACAAATTAG

Upstream 100 bases:

>100_bases
ACTATGCCAAATACGGTATTGTCGATGATAAACGAATTCTCGGAATGAGCGATCCAAAAAGCAAGCAGCGCCCTATCATC
CTTCAGGGAACTAAATAAGC

Downstream 100 bases:

>100_bases
GTGAACAAACTATGGCATACAAACCACAGTATGGTCCGGGAACCTCCAAAGTTGCGGAAGTACGTCGCAACCAGATGAAC
CCGAACGTAAAGCTCGAAAA

Product: ATP-dependent protease La

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MPLGRVTQLVDCRQSMGMGKGGSLAQRGTISECKNPDVIIVGMSPGRRHITKPVCDITSALRQQGIEYSVSTLVLNAGSG
VPPDADIGGVSLGSNFGILDREIEQIERHKVAVLHHGNIRSHVVHKSRKILQECNVNAVVVCQAPVDYEDLAKAGVKTAY
VMPKPDDIRTKGTVMGLVTGITRGQTPSRVAMSDVIHEVLRIIKSTN

Sequences:

>Translated_207_residues
MPLGRVTQLVDCRQSMGMGKGGSLAQRGTISECKNPDVIIVGMSPGRRHITKPVCDITSALRQQGIEYSVSTLVLNAGSG
VPPDADIGGVSLGSNFGILDREIEQIERHKVAVLHHGNIRSHVVHKSRKILQECNVNAVVVCQAPVDYEDLAKAGVKTAY
VMPKPDDIRTKGTVMGLVTGITRGQTPSRVAMSDVIHEVLRIIKSTN
>Mature_206_residues
PLGRVTQLVDCRQSMGMGKGGSLAQRGTISECKNPDVIIVGMSPGRRHITKPVCDITSALRQQGIEYSVSTLVLNAGSGV
PPDADIGGVSLGSNFGILDREIEQIERHKVAVLHHGNIRSHVVHKSRKILQECNVNAVVVCQAPVDYEDLAKAGVKTAYV
MPKPDDIRTKGTVMGLVTGITRGQTPSRVAMSDVIHEVLRIIKSTN

Specific function: Unknown

COG id: COG4056

COG function: function code H; Methyl coenzyme M reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007687 [H]

Pfam domain/function: PF04609 MCR_C [H]

EC number: NA

Molecular weight: Translated: 22240; Mature: 22109

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLGRVTQLVDCRQSMGMGKGGSLAQRGTISECKNPDVIIVGMSPGRRHITKPVCDITSA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHH
LRQQGIEYSVSTLVLNAGSGVPPDADIGGVSLGSNFGILDREIEQIERHKVAVLHHGNIR
HHHCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHEEEEECCCHH
SHVVHKSRKILQECNVNAVVVCQAPVDYEDLAKAGVKTAYVMPKPDDIRTKGTVMGLVTG
HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHH
ITRGQTPSRVAMSDVIHEVLRIIKSTN
HCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLGRVTQLVDCRQSMGMGKGGSLAQRGTISECKNPDVIIVGMSPGRRHITKPVCDITSA
CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHH
LRQQGIEYSVSTLVLNAGSGVPPDADIGGVSLGSNFGILDREIEQIERHKVAVLHHGNIR
HHHCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHEEEEECCCHH
SHVVHKSRKILQECNVNAVVVCQAPVDYEDLAKAGVKTAYVMPKPDDIRTKGTVMGLVTG
HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHH
ITRGQTPSRVAMSDVIHEVLRIIKSTN
HCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]