| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is nlpI [C]
Identifier: 124486367
GI number: 124486367
Start: 1585642
End: 1587792
Strand: Reverse
Name: nlpI [C]
Synonym: Mlab_1552
Alternate gene names: 124486367
Gene position: 1587792-1585642 (Counterclockwise)
Preceding gene: 124486368
Following gene: 124486364
Centisome position: 87.97
GC content: 51.23
Gene sequence:
>2151_bases ATGCGTGTCCGTGAGGGGAACCTAACACAGCAGTACTTCTGCGATTATCTGACATTGTTTGCAGGTGATGCATCCGCAAA GGAATCAGGTGAAGAAATTGTTTTGTCCAATCTGTTTCTGCATCGAATGAGTGTCGATGGCGGATTTCATGCAAGAGTTC TCTCGGCAATTCTCGGACACGAATCAGACCGATTCCTTCTCCTCAGCCTTTTCAAAGAAGTATCAGACGAAGAATACGCT CCTCTTCCACTTGATGAATGGCTGAAGTCAGAGTATAGTTCCGCAGTAAATAACGCTGACGTGAATCGGAAAATCGCTAT CGCTGCTCTTCTTCGTTCTCAGATATCCGGCACAAACAAGGCTGCAGAGATCGTTTCCGCGTATGGAAGTCAGTACCCGG AGAGCTGGTGGCAGTTTCAAACCCGCCGCCTGACCGTGGAAGAAATCGAAAACCCGGATATGTATTTCGGCGTCGGCCGT CGGCCGTTCTGGCATGCATTTCCTCTCGATGAATATGCTGCCGTACTTGGGGGTGCCGAAACGCTCCCGCCTGAGATCAT TTACGATATCATCATCTGCGTTGCCGGAGCCTGGTTCTCCACACTGACCCGTGAAGAAAAGATCATCTGGCTGAATATGC CAAGGACAACGCCCGATGAATGGGCAAAGTTTGCGGCCCCCCTGCTGACCCTTGAGAAGCCGGGTCCTGCATTATCCACG GCAAACTGGCTGTATGCTTCAGGAAATCATGATGCCGCTCTTGATCTGTACGCAAACATCACGCTTGCTTTCCCGCAGAC ACCGGTCGAAAAACCGGCCTTTGAACTCATGGGCGCTATTCTGTCCGAGTTCGGCGACTTCGACTATGCCTTCGAATCCT ATAAAAGCGCCTTCCTTCTCGCGAGAAACGAAGGTCCCTACGAGACCGCGGTTGGGTTGAAAAATCTCTGCGAAGTTGGA GATGATCTGGGGGAGGATATGCGGGATTATTACATCCGTATTGCGTCGATCGCAGAAGAACTCTCCCCTGACGACCGGGT GAGGCTATACTTCGATCTCGCTTCGTCCGCCAGAAAAAAATACAATTATCTCGATGAGTACGCCTACCTAGAACGCATCA TAGCAGAAGAAGGCGCCGAGGAACCGTTCTTTTCCAGAGCGATGTCCCGGATCTCCGAGATGAATCTGGCACTGGACTTT GATGGAAAACCCGACGATTCCGTTCTTCGGGAAAAAGATATCCGAGAACAGGCGGAGATTCTGGCTGCAAGAGGGGATGC CGCCTATTTCGGCTTCGATCCCGTCTGTGCTTTGTTCTGGTATAACAGATCGGATGCAGTGAGCGGTGAAAACTCCTCCG CAAAAAAGTTCCAGGCGGCCGTCGCTGCAGGTTTATACACTGAAGCAAAAGAGTATGCCAGCACGCCTGCAGAAAAAGTC ATGGTCATGATTATGGGAGATACGCCGGTACATATCGCGGCCCGCGAACTTCACACAGCAGTCACGGAGGCATGGAAAGC CGGTGCTGATATCCTGCCGGTTGTCAACCCGGTTCTGACAATGCTTTCCCGCGAAGACCGAATGCTGGTCAGCGATATTC TCACTGACCGCTCGACCCGTGATGACGAAAAGGCGCTGGTATGTTCCGGTATTGGGGATTGTTATATCTCCCTTGGAATG TCGGACGAAGCACGTCAGATGTTCCGTCTTGCTCTTCGCGCCAACCCCTCCACTCCGGTTCGTGCCCGAATATTTTCAGA GATCGGGCTACTGGAGTATGAAACCGGCAATTATGATGCATCGTCGGAAGCGTATCTATCTGCATTGAAAATGAACGAAC GGTTCCCGGCAGCATGGGCGGGTCTTGCCAAGGCATGCATCTGTCAGGCAAAATATCCGGAGGCTTTGGCAGCACTTGAA AATGCTATCAGACATCATCCAGTCAACACCACTTATCAGGATATGCGTAAAGCCGTTTTGGCAGTGATCGCTCATCCGGT CGATGAAACGGCCGACCGGCTTTTTACTCTCAATGACGCAGCAGGACTGCCTGCAGCGGCAGCTCTCTACTCGGAAAAAT CGCCGTCTGGCTTTAAAAAAGAGGCATGGGACGCCGTTTCCGTTGAAGATGTCTTAAAATATAGAAATTAA
Upstream 100 bases:
>100_bases AGGAGAGGGGACCTTTCCCCTCAAACGTTTTACACTATTTTTGTCAGTTCCTTTTCGCATCAGAAGAAATACATAGACTG ACGACTAAACACTGGTAATT
Downstream 100 bases:
>100_bases ACCTTTTTTGCATCCACTGCGCGAACAGTGAACAGCTTTTCGTTCGGCGTTTCCTGCATGATCCGAACCATCTCCTGTCT GATCACGGTCAGACGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MRVREGNLTQQYFCDYLTLFAGDASAKESGEEIVLSNLFLHRMSVDGGFHARVLSAILGHESDRFLLLSLFKEVSDEEYA PLPLDEWLKSEYSSAVNNADVNRKIAIAALLRSQISGTNKAAEIVSAYGSQYPESWWQFQTRRLTVEEIENPDMYFGVGR RPFWHAFPLDEYAAVLGGAETLPPEIIYDIIICVAGAWFSTLTREEKIIWLNMPRTTPDEWAKFAAPLLTLEKPGPALST ANWLYASGNHDAALDLYANITLAFPQTPVEKPAFELMGAILSEFGDFDYAFESYKSAFLLARNEGPYETAVGLKNLCEVG DDLGEDMRDYYIRIASIAEELSPDDRVRLYFDLASSARKKYNYLDEYAYLERIIAEEGAEEPFFSRAMSRISEMNLALDF DGKPDDSVLREKDIREQAEILAARGDAAYFGFDPVCALFWYNRSDAVSGENSSAKKFQAAVAAGLYTEAKEYASTPAEKV MVMIMGDTPVHIAARELHTAVTEAWKAGADILPVVNPVLTMLSREDRMLVSDILTDRSTRDDEKALVCSGIGDCYISLGM SDEARQMFRLALRANPSTPVRARIFSEIGLLEYETGNYDASSEAYLSALKMNERFPAAWAGLAKACICQAKYPEALAALE NAIRHHPVNTTYQDMRKAVLAVIAHPVDETADRLFTLNDAAGLPAAAALYSEKSPSGFKKEAWDAVSVEDVLKYRN
Sequences:
>Translated_716_residues MRVREGNLTQQYFCDYLTLFAGDASAKESGEEIVLSNLFLHRMSVDGGFHARVLSAILGHESDRFLLLSLFKEVSDEEYA PLPLDEWLKSEYSSAVNNADVNRKIAIAALLRSQISGTNKAAEIVSAYGSQYPESWWQFQTRRLTVEEIENPDMYFGVGR RPFWHAFPLDEYAAVLGGAETLPPEIIYDIIICVAGAWFSTLTREEKIIWLNMPRTTPDEWAKFAAPLLTLEKPGPALST ANWLYASGNHDAALDLYANITLAFPQTPVEKPAFELMGAILSEFGDFDYAFESYKSAFLLARNEGPYETAVGLKNLCEVG DDLGEDMRDYYIRIASIAEELSPDDRVRLYFDLASSARKKYNYLDEYAYLERIIAEEGAEEPFFSRAMSRISEMNLALDF DGKPDDSVLREKDIREQAEILAARGDAAYFGFDPVCALFWYNRSDAVSGENSSAKKFQAAVAAGLYTEAKEYASTPAEKV MVMIMGDTPVHIAARELHTAVTEAWKAGADILPVVNPVLTMLSREDRMLVSDILTDRSTRDDEKALVCSGIGDCYISLGM SDEARQMFRLALRANPSTPVRARIFSEIGLLEYETGNYDASSEAYLSALKMNERFPAAWAGLAKACICQAKYPEALAALE NAIRHHPVNTTYQDMRKAVLAVIAHPVDETADRLFTLNDAAGLPAAAALYSEKSPSGFKKEAWDAVSVEDVLKYRN >Mature_716_residues MRVREGNLTQQYFCDYLTLFAGDASAKESGEEIVLSNLFLHRMSVDGGFHARVLSAILGHESDRFLLLSLFKEVSDEEYA PLPLDEWLKSEYSSAVNNADVNRKIAIAALLRSQISGTNKAAEIVSAYGSQYPESWWQFQTRRLTVEEIENPDMYFGVGR RPFWHAFPLDEYAAVLGGAETLPPEIIYDIIICVAGAWFSTLTREEKIIWLNMPRTTPDEWAKFAAPLLTLEKPGPALST ANWLYASGNHDAALDLYANITLAFPQTPVEKPAFELMGAILSEFGDFDYAFESYKSAFLLARNEGPYETAVGLKNLCEVG DDLGEDMRDYYIRIASIAEELSPDDRVRLYFDLASSARKKYNYLDEYAYLERIIAEEGAEEPFFSRAMSRISEMNLALDF DGKPDDSVLREKDIREQAEILAARGDAAYFGFDPVCALFWYNRSDAVSGENSSAKKFQAAVAAGLYTEAKEYASTPAEKV MVMIMGDTPVHIAARELHTAVTEAWKAGADILPVVNPVLTMLSREDRMLVSDILTDRSTRDDEKALVCSGIGDCYISLGM SDEARQMFRLALRANPSTPVRARIFSEIGLLEYETGNYDASSEAYLSALKMNERFPAAWAGLAKACICQAKYPEALAALE NAIRHHPVNTTYQDMRKAVLAVIAHPVDETADRLFTLNDAAGLPAAAALYSEKSPSGFKKEAWDAVSVEDVLKYRN
Specific function: May Be Involved In Cell Division. Overexpression Of Nlpi Results In The Loss Of The Rod Morphology And The Formation Of Single Prolate Ellipsoids And Pairs Of Prolate Ellipsoids Joined By Partial Constrictions. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79754; Mature: 79754
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVREGNLTQQYFCDYLTLFAGDASAKESGEEIVLSNLFLHRMSVDGGFHARVLSAILGH CCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ESDRFLLLSLFKEVSDEEYAPLPLDEWLKSEYSSAVNNADVNRKIAIAALLRSQISGTNK CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH AAEIVSAYGSQYPESWWQFQTRRLTVEEIENPDMYFGVGRRPFWHAFPLDEYAAVLGGAE HHHHHHHHHCCCCHHHHHHHHHCEEHHHCCCCCEEEECCCCCCEECCCHHHHHHHHCCCC TLPPEIIYDIIICVAGAWFSTLTREEKIIWLNMPRTTPDEWAKFAAPLLTLEKPGPALST CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHEEECCCCCCCCC ANWLYASGNHDAALDLYANITLAFPQTPVEKPAFELMGAILSEFGDFDYAFESYKSAFLL CCEEEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCEEEE ARNEGPYETAVGLKNLCEVGDDLGEDMRDYYIRIASIAEELSPDDRVRLYFDLASSARKK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH YNYLDEYAYLERIIAEEGAEEPFFSRAMSRISEMNLALDFDGKPDDSVLREKDIREQAEI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHH LAARGDAAYFGFDPVCALFWYNRSDAVSGENSSAKKFQAAVAAGLYTEAKEYASTPAEKV HHHCCCCEEECCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHE MVMIMGDTPVHIAARELHTAVTEAWKAGADILPVVNPVLTMLSREDRMLVSDILTDRSTR EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC DDEKALVCSGIGDCYISLGMSDEARQMFRLALRANPSTPVRARIFSEIGLLEYETGNYDA CCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCC SSEAYLSALKMNERFPAAWAGLAKACICQAKYPEALAALENAIRHHPVNTTYQDMRKAVL CHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH AVIAHPVDETADRLFTLNDAAGLPAAAALYSEKSPSGFKKEAWDAVSVEDVLKYRN HHHHCCHHHHHHHEEEECCCCCCCHHHHHHCCCCCCCCHHHHCCCCCHHHHHHCCC >Mature Secondary Structure MRVREGNLTQQYFCDYLTLFAGDASAKESGEEIVLSNLFLHRMSVDGGFHARVLSAILGH CCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ESDRFLLLSLFKEVSDEEYAPLPLDEWLKSEYSSAVNNADVNRKIAIAALLRSQISGTNK CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH AAEIVSAYGSQYPESWWQFQTRRLTVEEIENPDMYFGVGRRPFWHAFPLDEYAAVLGGAE HHHHHHHHHCCCCHHHHHHHHHCEEHHHCCCCCEEEECCCCCCEECCCHHHHHHHHCCCC TLPPEIIYDIIICVAGAWFSTLTREEKIIWLNMPRTTPDEWAKFAAPLLTLEKPGPALST CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHEEECCCCCCCCC ANWLYASGNHDAALDLYANITLAFPQTPVEKPAFELMGAILSEFGDFDYAFESYKSAFLL CCEEEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCEEEE ARNEGPYETAVGLKNLCEVGDDLGEDMRDYYIRIASIAEELSPDDRVRLYFDLASSARKK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH YNYLDEYAYLERIIAEEGAEEPFFSRAMSRISEMNLALDFDGKPDDSVLREKDIREQAEI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHH LAARGDAAYFGFDPVCALFWYNRSDAVSGENSSAKKFQAAVAAGLYTEAKEYASTPAEKV HHHCCCCEEECCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHE MVMIMGDTPVHIAARELHTAVTEAWKAGADILPVVNPVLTMLSREDRMLVSDILTDRSTR EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC DDEKALVCSGIGDCYISLGMSDEARQMFRLALRANPSTPVRARIFSEIGLLEYETGNYDA CCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCC SSEAYLSALKMNERFPAAWAGLAKACICQAKYPEALAALENAIRHHPVNTTYQDMRKAVL CHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH AVIAHPVDETADRLFTLNDAAGLPAAAALYSEKSPSGFKKEAWDAVSVEDVLKYRN HHHHCCHHHHHHHEEEECCCCCCCHHHHHHCCCCCCCCHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA