| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486268
Identifier: 124486268
GI number: 124486268
Start: 1483255
End: 1485588
Strand: Reverse
Name: 124486268
Synonym: Mlab_1452
Alternate gene names: NA
Gene position: 1485588-1483255 (Counterclockwise)
Preceding gene: 124486271
Following gene: 124486267
Centisome position: 82.31
GC content: 50.34
Gene sequence:
>2334_bases ATGAACGGGAAAATCTACAATTCTGAAGAGAATTGTTACGGGAACGGCTGGAACTGGGATGCGGGGTCTCGTGTTCTTTC ACTGAATTCATATCATGGATCCGGGATCGACTGTTATGGGGATATCTCTATCATTGCCTCGGGTGCAGAAAATACCATCA TTGGGAAACATCGTCCGGGGATACGTGTGCGAAATGGTGGTCTGACTATTTCGGGTGAAGGATCGCTTATCCTTTCCGAA AGTGAAACCGGCATATGTGTTGATTTTGGAACATTATCTATAACGTCGGTATATGTGGGCATCACCGGGGTGGCCTGCGG GATCCATGCCAAAAAAGGCATCGCGATCTCCGGCTCGACCATCAGTATACTCTCTAAAGATACCGGTATCAGATCCGGTG CCGGCATAACTGCGGATACATCTTCTCTAAAGATTATTGCGGCCGGCACGGGTATAGAGTGTTTTGGCGGCCTCGAACTG GATGGGGGCACTCATCTCATTGAGGCGCCGGACGGAATGGGGATACATGTGCGTGATGGTTCATGTACCCTCAAAAACTG TTTCCTGCGGGCAGCTTCCCGAAAAATCGGGATCATCTCTGAAAAGGGAGATCTTCATCTCTCTTCTGTCACCGCAGAGA TCGGTGCCGGAACCGGCATTTCAGTTGGTGGATCCCTTATCGGAACGGATCTTCATCTCTTCATCAACGGTGAGGATGCC GGGATTCTCGTTGAAGGGGAAATCTGCCGTCTCTTTGATGGGAGTTGTGCGGTTTTTGGCAATTCGGCATTATCCTTTTC ACATGACGCTGTATTTACGCAGATGAATGTCACGGTCGAAGGAGAAATCACCGGGATCTTGATCGGTGCGGGCTTTTGTT TGGAAGACAGTTCCGTTTCCGTCATCAGCGGAAAAGAGATCGGCGTTCGTGTCGGAACAGATATGCACTTTTCCGGCAGG AGTCTGGAGATACGTGGTCGAACCGGCCTTGTCGTTAACGGAAATCTCGAGGTTTCGAACGGAACCCTCACATCGATCAA TGAAGGCACCGGGATCGATGTCAAAGGGACATATATCCAAAACTCCGGCATGATCTGCGGCACCGGTATGGCCGGGGATG GAATATGCGTCGCAAAAAAAATGACTGTGTACGGCGGGAAGATCGAGGCAACCGGCTATACGACCGGTCTTTATGTTCAT GATGATCTCAGGCTTACGTCGGGCCTGCTGACCGCTTCTGGAAAGACCGGGCTGAAGATAGACGGATCCATCGAAGATCT CGGGGGGTATCTTACCGTCTTTGGTGATGAATTTGGTCTGTACGTTTCCAACGGTGCCGCCAGTTTTAATGATGCCGTCG TTGATATTGCCGGGGATGTTGCATTGTATGCCGGGAATACCGTCAACATTTCCGGCGGAGCGGTTCAGATTTCAGGTCGT TACGCAGGCATTTTCTCCTGCAGCGGCGACATTCAGATCCACAGCGGCATGCATGACATTTCTGCAGATATCTACGGGAT ACTGATCACCTCGGGTTCGATCTATGCAAAAGGGGGATCTCTTCAGATCAGAGCAACCGACATCGAAGAAAATTCCTCTG GTATATGTCTTGGAAGCGGCGATCTTATCGTTTCCGGGACTCATCTGGATATTGTTGGCGGCATGTACGGGGTGAAAGGC GAACAAAGTACTGTAACGGTCGCGAATTCCGGTCTTGATGCCGAAGGGGCTATCTACGGGATTGCCGTAAAGCGTCTTTC ATTCACGGGGTGCAATCTTACCGCCTATGGTAAAAAAGCCGCTCTCTCTCTGGAAGATGCCACGACGCTCGGTGAAAAAG ATACGATTGTCACCTGTGGTAAATCCATGGGTGGTGCCGAACCCTGCCCGTATACCGATCAGAAGTATGTTCACCTCTAT CCGAGGCATTTTGCGCGGCTCATCATCCCGGCAACGGTCGAAAGTCTGGAGCAAATCGTCGAATGGGTGGATACTGCTCT TCGTCCAAACGGTGTTGCCGAACCCTTCATCTCAAAGATGACGCTGGTGATCGAAGAATTGTTTGTCAACATCGTCAATT ATGCCTACCCGAATGAAACCGGTTCAGTGACCTTTATGATGCATATCGGCCCTTGCCTGAAACTGATCATTACTGATCTG GGGGTGCCGTTTAACCCGCTTGAGTATGCAGAGCCGGATGTTACGCTGCCGATCGATGACCGAAACGTCGGCGGCTGGGG TATTTTCCTGTCCAGAAAACTGACCGACAGAATCACGTATGAACGTGTGAACGGGACGAATGTTCTGACTGTATACAAAA AAATCTACTCTTAG
Upstream 100 bases:
>100_bases CAAAAAATGTCCCTGACATACTGTTATGAATATTAAAAACAAACTATACATCGTACTTGAGGATATGACCCCGCAAATCT ATTCCGATACCCAACTTGTC
Downstream 100 bases:
>100_bases TGTCTAAAAATGGGGGAACTACATCTATGAAAATCATAAAAACTGTTAATGAATCCAACCTGATCCTTGAGCTGGATGGG AAACTGGATGCCCGAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Sensor Histidine Kinase; Anti-Sigma F Protein; Anti Sigma Factor; Sigma Regulatory Factor-Histidine Kinase; Serine-Protein Kinase
Number of amino acids: Translated: 777; Mature: 777
Protein sequence:
>777_residues MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPGIRVRNGGLTISGEGSLILSE SETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGSTISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLEL DGGTHLIEAPDGMGIHVRDGSCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVSVISGKEIGVRVGTDMHFSGR SLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQNSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVH DDLRLTSGLLTASGKTGLKIDGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSGDLIVSGTHLDIVGGMYGVKG EQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKAALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLY PRHFARLIIPATVESLEQIVEWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS
Sequences:
>Translated_777_residues MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPGIRVRNGGLTISGEGSLILSE SETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGSTISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLEL DGGTHLIEAPDGMGIHVRDGSCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVSVISGKEIGVRVGTDMHFSGR SLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQNSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVH DDLRLTSGLLTASGKTGLKIDGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSGDLIVSGTHLDIVGGMYGVKG EQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKAALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLY PRHFARLIIPATVESLEQIVEWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS >Mature_777_residues MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPGIRVRNGGLTISGEGSLILSE SETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGSTISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLEL DGGTHLIEAPDGMGIHVRDGSCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVSVISGKEIGVRVGTDMHFSGR SLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQNSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVH DDLRLTSGLLTASGKTGLKIDGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSGDLIVSGTHLDIVGGMYGVKG EQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKAALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLY PRHFARLIIPATVESLEQIVEWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81025; Mature: 81025
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPG CCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCEEECCCCC IRVRNGGLTISGEGSLILSESETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGST CEEECCCEEEECCCCEEEECCCCEEEEEECCEEEEEEEEEEEEEEEEEECCCCEEEECCE ISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLELDGGTHLIEAPDGMGIHVRDG EEEEECCCCCCCCCCCEECCCCEEEEEECCCCEEEECEEECCCEEEEECCCCCEEEEECC SCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA CCCHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCEECCCEEEECEEEEEECCCCC GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVS CEEEECCEEEEECCCEEEECCCEEEECCCEEEEEEEEEEECEEEEEEEECEEEECCCCEE VISGKEIGVRVGTDMHFSGRSLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQ EEECCEEEEEECCCEEECCCEEEEECCEEEEEECCEEECCCEEEEECCCCCCEEEEEEEE NSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVHDDLRLTSGLLTASGKTGLKI CCCEEEECCCCCCCEEEEEEEEEECCEEEECCEEEEEEEECCCEEECCEEEECCCCCEEE DGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR CCCHHHCCCEEEEEECCEEEEEECCCCCCCCEEEEEECCEEEEECCEEEECCCEEEECCE YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSG EEEEEEECCCEEEECCCCCCCCCEEEEEEECCEEEEECCEEEEEEEECCCCCCEEEEECC DLIVSGTHLDIVGGMYGVKGEQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKA CEEEECCEEEEECCEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCEEECCCEE ALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLYPRHFARLIIPATVESLEQIV EEEECHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHH EWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHC GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEHHHCCEEEEEECCCEEEEEEHHHCC >Mature Secondary Structure MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPG CCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCEEECCCCC IRVRNGGLTISGEGSLILSESETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGST CEEECCCEEEECCCCEEEECCCCEEEEEECCEEEEEEEEEEEEEEEEEECCCCEEEECCE ISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLELDGGTHLIEAPDGMGIHVRDG EEEEECCCCCCCCCCCEECCCCEEEEEECCCCEEEECEEECCCEEEEECCCCCEEEEECC SCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA CCCHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCEECCCEEEECEEEEEECCCCC GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVS CEEEECCEEEEECCCEEEECCCEEEECCCEEEEEEEEEEECEEEEEEEECEEEECCCCEE VISGKEIGVRVGTDMHFSGRSLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQ EEECCEEEEEECCCEEECCCEEEEECCEEEEEECCEEECCCEEEEECCCCCCEEEEEEEE NSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVHDDLRLTSGLLTASGKTGLKI CCCEEEECCCCCCCEEEEEEEEEECCEEEECCEEEEEEEECCCEEECCEEEECCCCCEEE DGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR CCCHHHCCCEEEEEECCEEEEEECCCCCCCCEEEEEECCEEEEECCEEEECCCEEEECCE YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSG EEEEEEECCCEEEECCCCCCCCCEEEEEEECCEEEEECCEEEEEEEECCCCCCEEEEECC DLIVSGTHLDIVGGMYGVKGEQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKA CEEEECCEEEEECCEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCEEECCCEE ALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLYPRHFARLIIPATVESLEQIV EEEECHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHH EWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHC GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEHHHCCEEEEEECCCEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA