Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486268

Identifier: 124486268

GI number: 124486268

Start: 1483255

End: 1485588

Strand: Reverse

Name: 124486268

Synonym: Mlab_1452

Alternate gene names: NA

Gene position: 1485588-1483255 (Counterclockwise)

Preceding gene: 124486271

Following gene: 124486267

Centisome position: 82.31

GC content: 50.34

Gene sequence:

>2334_bases
ATGAACGGGAAAATCTACAATTCTGAAGAGAATTGTTACGGGAACGGCTGGAACTGGGATGCGGGGTCTCGTGTTCTTTC
ACTGAATTCATATCATGGATCCGGGATCGACTGTTATGGGGATATCTCTATCATTGCCTCGGGTGCAGAAAATACCATCA
TTGGGAAACATCGTCCGGGGATACGTGTGCGAAATGGTGGTCTGACTATTTCGGGTGAAGGATCGCTTATCCTTTCCGAA
AGTGAAACCGGCATATGTGTTGATTTTGGAACATTATCTATAACGTCGGTATATGTGGGCATCACCGGGGTGGCCTGCGG
GATCCATGCCAAAAAAGGCATCGCGATCTCCGGCTCGACCATCAGTATACTCTCTAAAGATACCGGTATCAGATCCGGTG
CCGGCATAACTGCGGATACATCTTCTCTAAAGATTATTGCGGCCGGCACGGGTATAGAGTGTTTTGGCGGCCTCGAACTG
GATGGGGGCACTCATCTCATTGAGGCGCCGGACGGAATGGGGATACATGTGCGTGATGGTTCATGTACCCTCAAAAACTG
TTTCCTGCGGGCAGCTTCCCGAAAAATCGGGATCATCTCTGAAAAGGGAGATCTTCATCTCTCTTCTGTCACCGCAGAGA
TCGGTGCCGGAACCGGCATTTCAGTTGGTGGATCCCTTATCGGAACGGATCTTCATCTCTTCATCAACGGTGAGGATGCC
GGGATTCTCGTTGAAGGGGAAATCTGCCGTCTCTTTGATGGGAGTTGTGCGGTTTTTGGCAATTCGGCATTATCCTTTTC
ACATGACGCTGTATTTACGCAGATGAATGTCACGGTCGAAGGAGAAATCACCGGGATCTTGATCGGTGCGGGCTTTTGTT
TGGAAGACAGTTCCGTTTCCGTCATCAGCGGAAAAGAGATCGGCGTTCGTGTCGGAACAGATATGCACTTTTCCGGCAGG
AGTCTGGAGATACGTGGTCGAACCGGCCTTGTCGTTAACGGAAATCTCGAGGTTTCGAACGGAACCCTCACATCGATCAA
TGAAGGCACCGGGATCGATGTCAAAGGGACATATATCCAAAACTCCGGCATGATCTGCGGCACCGGTATGGCCGGGGATG
GAATATGCGTCGCAAAAAAAATGACTGTGTACGGCGGGAAGATCGAGGCAACCGGCTATACGACCGGTCTTTATGTTCAT
GATGATCTCAGGCTTACGTCGGGCCTGCTGACCGCTTCTGGAAAGACCGGGCTGAAGATAGACGGATCCATCGAAGATCT
CGGGGGGTATCTTACCGTCTTTGGTGATGAATTTGGTCTGTACGTTTCCAACGGTGCCGCCAGTTTTAATGATGCCGTCG
TTGATATTGCCGGGGATGTTGCATTGTATGCCGGGAATACCGTCAACATTTCCGGCGGAGCGGTTCAGATTTCAGGTCGT
TACGCAGGCATTTTCTCCTGCAGCGGCGACATTCAGATCCACAGCGGCATGCATGACATTTCTGCAGATATCTACGGGAT
ACTGATCACCTCGGGTTCGATCTATGCAAAAGGGGGATCTCTTCAGATCAGAGCAACCGACATCGAAGAAAATTCCTCTG
GTATATGTCTTGGAAGCGGCGATCTTATCGTTTCCGGGACTCATCTGGATATTGTTGGCGGCATGTACGGGGTGAAAGGC
GAACAAAGTACTGTAACGGTCGCGAATTCCGGTCTTGATGCCGAAGGGGCTATCTACGGGATTGCCGTAAAGCGTCTTTC
ATTCACGGGGTGCAATCTTACCGCCTATGGTAAAAAAGCCGCTCTCTCTCTGGAAGATGCCACGACGCTCGGTGAAAAAG
ATACGATTGTCACCTGTGGTAAATCCATGGGTGGTGCCGAACCCTGCCCGTATACCGATCAGAAGTATGTTCACCTCTAT
CCGAGGCATTTTGCGCGGCTCATCATCCCGGCAACGGTCGAAAGTCTGGAGCAAATCGTCGAATGGGTGGATACTGCTCT
TCGTCCAAACGGTGTTGCCGAACCCTTCATCTCAAAGATGACGCTGGTGATCGAAGAATTGTTTGTCAACATCGTCAATT
ATGCCTACCCGAATGAAACCGGTTCAGTGACCTTTATGATGCATATCGGCCCTTGCCTGAAACTGATCATTACTGATCTG
GGGGTGCCGTTTAACCCGCTTGAGTATGCAGAGCCGGATGTTACGCTGCCGATCGATGACCGAAACGTCGGCGGCTGGGG
TATTTTCCTGTCCAGAAAACTGACCGACAGAATCACGTATGAACGTGTGAACGGGACGAATGTTCTGACTGTATACAAAA
AAATCTACTCTTAG

Upstream 100 bases:

>100_bases
CAAAAAATGTCCCTGACATACTGTTATGAATATTAAAAACAAACTATACATCGTACTTGAGGATATGACCCCGCAAATCT
ATTCCGATACCCAACTTGTC

Downstream 100 bases:

>100_bases
TGTCTAAAAATGGGGGAACTACATCTATGAAAATCATAAAAACTGTTAATGAATCCAACCTGATCCTTGAGCTGGATGGG
AAACTGGATGCCCGAAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: Sensor Histidine Kinase; Anti-Sigma F Protein; Anti Sigma Factor; Sigma Regulatory Factor-Histidine Kinase; Serine-Protein Kinase

Number of amino acids: Translated: 777; Mature: 777

Protein sequence:

>777_residues
MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPGIRVRNGGLTISGEGSLILSE
SETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGSTISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLEL
DGGTHLIEAPDGMGIHVRDGSCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA
GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVSVISGKEIGVRVGTDMHFSGR
SLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQNSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVH
DDLRLTSGLLTASGKTGLKIDGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR
YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSGDLIVSGTHLDIVGGMYGVKG
EQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKAALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLY
PRHFARLIIPATVESLEQIVEWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL
GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS

Sequences:

>Translated_777_residues
MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPGIRVRNGGLTISGEGSLILSE
SETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGSTISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLEL
DGGTHLIEAPDGMGIHVRDGSCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA
GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVSVISGKEIGVRVGTDMHFSGR
SLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQNSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVH
DDLRLTSGLLTASGKTGLKIDGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR
YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSGDLIVSGTHLDIVGGMYGVKG
EQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKAALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLY
PRHFARLIIPATVESLEQIVEWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL
GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS
>Mature_777_residues
MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPGIRVRNGGLTISGEGSLILSE
SETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGSTISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLEL
DGGTHLIEAPDGMGIHVRDGSCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA
GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVSVISGKEIGVRVGTDMHFSGR
SLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQNSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVH
DDLRLTSGLLTASGKTGLKIDGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR
YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSGDLIVSGTHLDIVGGMYGVKG
EQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKAALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLY
PRHFARLIIPATVESLEQIVEWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL
GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS

Specific function: Unknown

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81025; Mature: 81025

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPG
CCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCEEECCCCC
IRVRNGGLTISGEGSLILSESETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGST
CEEECCCEEEECCCCEEEECCCCEEEEEECCEEEEEEEEEEEEEEEEEECCCCEEEECCE
ISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLELDGGTHLIEAPDGMGIHVRDG
EEEEECCCCCCCCCCCEECCCCEEEEEECCCCEEEECEEECCCEEEEECCCCCEEEEECC
SCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA
CCCHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCEECCCEEEECEEEEEECCCCC
GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVS
CEEEECCEEEEECCCEEEECCCEEEECCCEEEEEEEEEEECEEEEEEEECEEEECCCCEE
VISGKEIGVRVGTDMHFSGRSLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQ
EEECCEEEEEECCCEEECCCEEEEECCEEEEEECCEEECCCEEEEECCCCCCEEEEEEEE
NSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVHDDLRLTSGLLTASGKTGLKI
CCCEEEECCCCCCCEEEEEEEEEECCEEEECCEEEEEEEECCCEEECCEEEECCCCCEEE
DGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR
CCCHHHCCCEEEEEECCEEEEEECCCCCCCCEEEEEECCEEEEECCEEEECCCEEEECCE
YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSG
EEEEEEECCCEEEECCCCCCCCCEEEEEEECCEEEEECCEEEEEEEECCCCCCEEEEECC
DLIVSGTHLDIVGGMYGVKGEQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKA
CEEEECCEEEEECCEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCEEECCCEE
ALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLYPRHFARLIIPATVESLEQIV
EEEECHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHH
EWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHC
GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEHHHCCEEEEEECCCEEEEEEHHHCC
>Mature Secondary Structure
MNGKIYNSEENCYGNGWNWDAGSRVLSLNSYHGSGIDCYGDISIIASGAENTIIGKHRPG
CCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCEEECCCCC
IRVRNGGLTISGEGSLILSESETGICVDFGTLSITSVYVGITGVACGIHAKKGIAISGST
CEEECCCEEEECCCCEEEECCCCEEEEEECCEEEEEEEEEEEEEEEEEECCCCEEEECCE
ISILSKDTGIRSGAGITADTSSLKIIAAGTGIECFGGLELDGGTHLIEAPDGMGIHVRDG
EEEEECCCCCCCCCCCEECCCCEEEEEECCCCEEEECEEECCCEEEEECCCCCEEEEECC
SCTLKNCFLRAASRKIGIISEKGDLHLSSVTAEIGAGTGISVGGSLIGTDLHLFINGEDA
CCCHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCEECCCEEEECEEEEEECCCCC
GILVEGEICRLFDGSCAVFGNSALSFSHDAVFTQMNVTVEGEITGILIGAGFCLEDSSVS
CEEEECCEEEEECCCEEEECCCEEEECCCEEEEEEEEEEECEEEEEEEECEEEECCCCEE
VISGKEIGVRVGTDMHFSGRSLEIRGRTGLVVNGNLEVSNGTLTSINEGTGIDVKGTYIQ
EEECCEEEEEECCCEEECCCEEEEECCEEEEEECCEEECCCEEEEECCCCCCEEEEEEEE
NSGMICGTGMAGDGICVAKKMTVYGGKIEATGYTTGLYVHDDLRLTSGLLTASGKTGLKI
CCCEEEECCCCCCCEEEEEEEEEECCEEEECCEEEEEEEECCCEEECCEEEECCCCCEEE
DGSIEDLGGYLTVFGDEFGLYVSNGAASFNDAVVDIAGDVALYAGNTVNISGGAVQISGR
CCCHHHCCCEEEEEECCEEEEEECCCCCCCCEEEEEECCEEEEECCEEEECCCEEEECCE
YAGIFSCSGDIQIHSGMHDISADIYGILITSGSIYAKGGSLQIRATDIEENSSGICLGSG
EEEEEEECCCEEEECCCCCCCCCEEEEEEECCEEEEECCEEEEEEEECCCCCCEEEEECC
DLIVSGTHLDIVGGMYGVKGEQSTVTVANSGLDAEGAIYGIAVKRLSFTGCNLTAYGKKA
CEEEECCEEEEECCEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCEEECCCEE
ALSLEDATTLGEKDTIVTCGKSMGGAEPCPYTDQKYVHLYPRHFARLIIPATVESLEQIV
EEEECHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHH
EWVDTALRPNGVAEPFISKMTLVIEELFVNIVNYAYPNETGSVTFMMHIGPCLKLIITDL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHC
GVPFNPLEYAEPDVTLPIDDRNVGGWGIFLSRKLTDRITYERVNGTNVLTVYKKIYS
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEHHHCCEEEEEECCCEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA