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The map label for this gene is yjjU [H]

Identifier: 124486226

GI number: 124486226

Start: 1440299

End: 1441147

Strand: Reverse

Name: yjjU [H]

Synonym: Mlab_1409

Alternate gene names: 124486226

Gene position: 1441147-1440299 (Counterclockwise)

Preceding gene: 124486227

Following gene: 124486225

Centisome position: 79.84

GC content: 46.17

Gene sequence:

>849_bases
ATGTATTCTGCAGGCTTGATTTTCGAAGGGGGCGGAATGCGCGGCGCCTATACGACAGGGGTTATCGATGCATTTCTGGA
TAATGATCTGGAGTTTTCCCGTTGTTACGGCGTCTCGGTTGGGGCCTGCAATGCCGCATCGTTCCTCGCAAAACAGCGCA
GAAGGGCATATCGGGTAACGACCGATTATATTGGAGATAAACGGTACTGTAGTCTTCGAAATCTTTTGACGACAGGAAAT
CTCTTCGGTCCGGAAATGCTCTATCATACCATTCCGGAAAAGCTTGATCCGTATGATTATGATACGTTTTCCAGATATGC
TGGAATACTGTCTGTTGTCGTTACCAACTGTGAAACAGGCGAAGCTGAATATTTTCATCTGAAAAATATGCGTGAAGAGG
TGAATGTTCTTCAGGCATCGAGTTCTCTCCCTCTCCTTGCAAAACCAGTTTTGATCAACGGAGCAGAATATCTTGACGGC
GGGGTTGCTGATTCGATTCCTTTGCAGCGTTCTATCGATGACGGAAACGTCAAAAATGTTATTGTCTTAACACAGGACAT
CACCTATCGAAAAAAGCCGATGAAGATCGTTCCCCTTTTGAAAATCTTCTATAGAAAATATCCGCATCTTGTCGATCAGC
TTGCGACGCGTCACCTCCGATATAATCAGACGCTGGATCTTCTGGCACAAGAGGAATCTGCCTGCCGGGCTTTTGTCCTC
CGGCCCCAAAAACCGGTGAACATCGGCAGAGTCGAGACGAACAAAACAAAGCTCGCTGCTCTTTATGATGACGGATATCG
GGATACAATTGCCAGAATGGATGATCTGAAAGCGTTTCTGGAAAAGTAA

Upstream 100 bases:

>100_bases
ACATGAAGAGAATCGCTCCATTCTATGAAGAAGGGTATCAGGAGACAGTGGACGTAATTGATGATCTGATCGCATTTCTG
GAGAAGTGAGGCTTCATCCA

Downstream 100 bases:

>100_bases
TCCATTCTCCTTTTTCAAACAGGCTTTTCTCCAAAAAACACCAATCATATCCTATGGGACTTACCCGGCGAATCATTCCC
TGTCTTGATCTGAAAGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MYSAGLIFEGGGMRGAYTTGVIDAFLDNDLEFSRCYGVSVGACNAASFLAKQRRRAYRVTTDYIGDKRYCSLRNLLTTGN
LFGPEMLYHTIPEKLDPYDYDTFSRYAGILSVVVTNCETGEAEYFHLKNMREEVNVLQASSSLPLLAKPVLINGAEYLDG
GVADSIPLQRSIDDGNVKNVIVLTQDITYRKKPMKIVPLLKIFYRKYPHLVDQLATRHLRYNQTLDLLAQEESACRAFVL
RPQKPVNIGRVETNKTKLAALYDDGYRDTIARMDDLKAFLEK

Sequences:

>Translated_282_residues
MYSAGLIFEGGGMRGAYTTGVIDAFLDNDLEFSRCYGVSVGACNAASFLAKQRRRAYRVTTDYIGDKRYCSLRNLLTTGN
LFGPEMLYHTIPEKLDPYDYDTFSRYAGILSVVVTNCETGEAEYFHLKNMREEVNVLQASSSLPLLAKPVLINGAEYLDG
GVADSIPLQRSIDDGNVKNVIVLTQDITYRKKPMKIVPLLKIFYRKYPHLVDQLATRHLRYNQTLDLLAQEESACRAFVL
RPQKPVNIGRVETNKTKLAALYDDGYRDTIARMDDLKAFLEK
>Mature_282_residues
MYSAGLIFEGGGMRGAYTTGVIDAFLDNDLEFSRCYGVSVGACNAASFLAKQRRRAYRVTTDYIGDKRYCSLRNLLTTGN
LFGPEMLYHTIPEKLDPYDYDTFSRYAGILSVVVTNCETGEAEYFHLKNMREEVNVLQASSSLPLLAKPVLINGAEYLDG
GVADSIPLQRSIDDGNVKNVIVLTQDITYRKKPMKIVPLLKIFYRKYPHLVDQLATRHLRYNQTLDLLAQEESACRAFVL
RPQKPVNIGRVETNKTKLAALYDDGYRDTIARMDDLKAFLEK

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=255, Percent_Identity=25.4901960784314, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31840; Mature: 31840

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSAGLIFEGGGMRGAYTTGVIDAFLDNDLEFSRCYGVSVGACNAASFLAKQRRRAYRVT
CCCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHEECCCCCCCHHHHHHHHHHHHHEEEH
TDYIGDKRYCSLRNLLTTGNLFGPEMLYHTIPEKLDPYDYDTFSRYAGILSVVVTNCETG
HHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
EAEYFHLKNMREEVNVLQASSSLPLLAKPVLINGAEYLDGGVADSIPLQRSIDDGNVKNV
CCHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCHHHHCCCCCCCCCCCCCCCCCCCCEE
IVLTQDITYRKKPMKIVPLLKIFYRKYPHLVDQLATRHLRYNQTLDLLAQEESACRAFVL
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEE
RPQKPVNIGRVETNKTKLAALYDDGYRDTIARMDDLKAFLEK
CCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYSAGLIFEGGGMRGAYTTGVIDAFLDNDLEFSRCYGVSVGACNAASFLAKQRRRAYRVT
CCCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHEECCCCCCCHHHHHHHHHHHHHEEEH
TDYIGDKRYCSLRNLLTTGNLFGPEMLYHTIPEKLDPYDYDTFSRYAGILSVVVTNCETG
HHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
EAEYFHLKNMREEVNVLQASSSLPLLAKPVLINGAEYLDGGVADSIPLQRSIDDGNVKNV
CCHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCHHHHCCCCCCCCCCCCCCCCCCCCEE
IVLTQDITYRKKPMKIVPLLKIFYRKYPHLVDQLATRHLRYNQTLDLLAQEESACRAFVL
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEE
RPQKPVNIGRVETNKTKLAALYDDGYRDTIARMDDLKAFLEK
CCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]