| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is rpl37Ae [H]
Identifier: 124486157
GI number: 124486157
Start: 1364814
End: 1365098
Strand: Reverse
Name: rpl37Ae [H]
Synonym: Mlab_1339
Alternate gene names: 124486157
Gene position: 1365098-1364814 (Counterclockwise)
Preceding gene: 124486158
Following gene: 298205348
Centisome position: 75.63
GC content: 56.14
Gene sequence:
>285_bases ATGGCATCCAAGAGTAAACATGTTGCAAAAGGACGCGTCACCGGCAGCGCCGGACGCTTTGGTCCGAGATACGGCCGTTT CTGCCGTAAGATGGTCAATGAGAGCGAGAAGATCTCCCGCGCGAAGCACCTGTGCCCGATGTGCGATACGATCGCTGTAA AGCGTGTCGGAACCGGCATCTGGGAATGCAGAAAATGCGGATACAAATACGCAGGCGGCGCCTACGTCCCGCAGACCCCC GGCCTCAAGGTCGTTCTTCGTACTATCGAGACCAAAGGAGTATAA
Upstream 100 bases:
>100_bases CTGCGGCGAAAGGCGATGCTCAGCTCAAGATACTTGAGTAACGCATACTATTAAAACAACTAAGAACGAATATTACTAGA TATTTCTGGAGGAATAAAAA
Downstream 100 bases:
>100_bases CCCAATGGTTGCTTATAAGTGCGCCCGCTGTAAACAGTTGGTTGAGATCGGTACGAACATCCGCTGCCCCTACTGCGGTC ACCGTATTCTTTTCAAGGCC
Product: 50S ribosomal protein L37AE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MASKSKHVAKGRVTGSAGRFGPRYGRFCRKMVNESEKISRAKHLCPMCDTIAVKRVGTGIWECRKCGYKYAGGAYVPQTP GLKVVLRTIETKGV
Sequences:
>Translated_94_residues MASKSKHVAKGRVTGSAGRFGPRYGRFCRKMVNESEKISRAKHLCPMCDTIAVKRVGTGIWECRKCGYKYAGGAYVPQTP GLKVVLRTIETKGV >Mature_93_residues ASKSKHVAKGRVTGSAGRFGPRYGRFCRKMVNESEKISRAKHLCPMCDTIAVKRVGTGIWECRKCGYKYAGGAYVPQTPG LKVVLRTIETKGV
Specific function: Unknown
COG id: COG1997
COG function: function code J; Ribosomal protein L37AE/L43A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L37Ae family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002674 - InterPro: IPR011331 - InterPro: IPR022945 - InterPro: IPR011332 [H]
Pfam domain/function: PF01780 Ribosomal_L37ae [H]
EC number: NA
Molecular weight: Translated: 10321; Mature: 10190
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKSKHVAKGRVTGSAGRFGPRYGRFCRKMVNESEKISRAKHLCPMCDTIAVKRVGTGI CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHH WECRKCGYKYAGGAYVPQTPGLKVVLRTIETKGV HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure ASKSKHVAKGRVTGSAGRFGPRYGRFCRKMVNESEKISRAKHLCPMCDTIAVKRVGTGI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHH WECRKCGYKYAGGAYVPQTPGLKVVLRTIETKGV HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA