| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486145
Identifier: 124486145
GI number: 124486145
Start: 1357035
End: 1357706
Strand: Reverse
Name: 124486145
Synonym: Mlab_1327
Alternate gene names: NA
Gene position: 1357706-1357035 (Counterclockwise)
Preceding gene: 124486146
Following gene: 124486144
Centisome position: 75.22
GC content: 63.24
Gene sequence:
>672_bases ATGCACACGACGGTCTCGGTCTTTGCAAAGCCGGTCGGCGGGGTCTCCGGGACGACCCGGGTCTTCCCCGATATCCTCCA GACGGCGGCAAAGATGCTCAAAAAGGCGGAAGGCGGGATCCTCACCGACTCGTTCGTGACCCACACGGCCGACCGGCTGG TCCTGATCGCGGTGCATGATCCGGATGTTCTGCCGGACACGCTTATTGCCGCGGTCTTCTCCGCAGCCGAGGAACTCGCA CAAAAACGTCATCTGTTCTGTGATGCCGCCCCGGTGTCGGTCTGCCGGATGACGATCCCGGAAAGGGCGAACGAGCCGTT TCTCCTGTTTCTCGCCGGGTCGGACGTCATGCCATGGGGCGAGGTCATGACCCCCGGACGGGACTCAGACGATGCCTGTA TCGTGGACGGGGTTCTCTTCCTCGCACGTGCCGAGGGCGAGTTCCCGTCCGTTGCGGCGTTCTGCGAGAGGTTCGCCCGC CGCGGTGTAAATCAGCAGGGCGTATGCCCTGTGAGTCTCTGTGATTCGTCGAATGTCCGGACAACCGTCATCCCGGTGGT CGGCCTCGGCTTTTCGCTCTGTGACGGAAGGCTTGCCGGCCCGGTGGATCTTTTCGATACGCCGCTCTTTGACGCCCCCC GGTTCCGTGCTTCCGACCAGCACGCCGAGTAA
Upstream 100 bases:
>100_bases CTTCGACCCTTGAGATCGTCCCGACAAAGGTTCATCAGAGAACGCCCGTGTATGTCGGCAGCAAAGGGATGATCGCGAAA ATCGAGGCGATTCGCTGAAC
Downstream 100 bases:
>100_bases CGGCTCGAATCTCAAATCTATTTTTTGTCCGCCGTTTTTGACAAATTGTTTGATTTGCCGTTCATTTTTTCGCCATTGTG AATCTATATATACTTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MHTTVSVFAKPVGGVSGTTRVFPDILQTAAKMLKKAEGGILTDSFVTHTADRLVLIAVHDPDVLPDTLIAAVFSAAEELA QKRHLFCDAAPVSVCRMTIPERANEPFLLFLAGSDVMPWGEVMTPGRDSDDACIVDGVLFLARAEGEFPSVAAFCERFAR RGVNQQGVCPVSLCDSSNVRTTVIPVVGLGFSLCDGRLAGPVDLFDTPLFDAPRFRASDQHAE
Sequences:
>Translated_223_residues MHTTVSVFAKPVGGVSGTTRVFPDILQTAAKMLKKAEGGILTDSFVTHTADRLVLIAVHDPDVLPDTLIAAVFSAAEELA QKRHLFCDAAPVSVCRMTIPERANEPFLLFLAGSDVMPWGEVMTPGRDSDDACIVDGVLFLARAEGEFPSVAAFCERFAR RGVNQQGVCPVSLCDSSNVRTTVIPVVGLGFSLCDGRLAGPVDLFDTPLFDAPRFRASDQHAE >Mature_223_residues MHTTVSVFAKPVGGVSGTTRVFPDILQTAAKMLKKAEGGILTDSFVTHTADRLVLIAVHDPDVLPDTLIAAVFSAAEELA QKRHLFCDAAPVSVCRMTIPERANEPFLLFLAGSDVMPWGEVMTPGRDSDDACIVDGVLFLARAEGEFPSVAAFCERFAR RGVNQQGVCPVSLCDSSNVRTTVIPVVGLGFSLCDGRLAGPVDLFDTPLFDAPRFRASDQHAE
Specific function: Unknown
COG id: COG1980
COG function: function code G; Archaeal fructose 1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23877; Mature: 23877
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTTVSVFAKPVGGVSGTTRVFPDILQTAAKMLKKAEGGILTDSFVTHTADRLVLIAVHD CCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHHHHHCCCCEEEEEECC PDVLPDTLIAAVFSAAEELAQKRHLFCDAAPVSVCRMTIPERANEPFLLFLAGSDVMPWG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCH EVMTPGRDSDDACIVDGVLFLARAEGEFPSVAAFCERFARRGVNQQGVCPVSLCDSSNVR HHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCE TTVIPVVGLGFSLCDGRLAGPVDLFDTPLFDAPRFRASDQHAE EEEEEHHHCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTTVSVFAKPVGGVSGTTRVFPDILQTAAKMLKKAEGGILTDSFVTHTADRLVLIAVHD CCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHHHHHCCCCEEEEEECC PDVLPDTLIAAVFSAAEELAQKRHLFCDAAPVSVCRMTIPERANEPFLLFLAGSDVMPWG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCH EVMTPGRDSDDACIVDGVLFLARAEGEFPSVAAFCERFARRGVNQQGVCPVSLCDSSNVR HHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCE TTVIPVVGLGFSLCDGRLAGPVDLFDTPLFDAPRFRASDQHAE EEEEEHHHCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA