| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486141
Identifier: 124486141
GI number: 124486141
Start: 1352443
End: 1353477
Strand: Reverse
Name: 124486141
Synonym: Mlab_1323
Alternate gene names: NA
Gene position: 1353477-1352443 (Counterclockwise)
Preceding gene: 124486142
Following gene: 124486138
Centisome position: 74.99
GC content: 58.84
Gene sequence:
>1035_bases GTGATCCTGCTTGAAGGCTCGTATCGGGAGATGGGCAGGCAGTACGGCGGTCTGATGAAAACCGAACTGCTGTCTGAGTA TGCCATGCTCACAAAAACCCTTGAAGACCGCGGATATTCCCTCGATTATCTCCGCTGGTATGCGTCAGCCGGCACACAAT TCCAGCCCGAGCGGATGAAGGAGATCACCCGCGGGATGGCCGAGACGACCGGTCTTTCGGAGGCCGACCTTTCGATTCTC TACTACGGTCCGGCCCTGTATATCTCGATGCCGGCCGGCTGTTCCTATCTCGCCGTCTGGGATACTTATACAACGGACGG ATCGGTCGTCCTTTCGCGGAACTGGGACCTTCCCGATCTTTTGGATCCGTTCAATCCGTATTACGTGCTTGCCGTGTGCC GGCCGACGGACGGAAGCAACGGTGTTGCAACCTTCGGCCCGGCGGGTTCCCGCCCCGAGACGCTGATGAACAGCGCCGGT CTCTTTATTGCAGACGACAACTCGGGTCTCGCTCCCGTCGGCCAGGATGACCGCCCTGATCTGATATCGGAGTTCTTCCG CCTGATGCTCGATTACTCGGATCTTGACGGTTTGAAGACGGGTGTTTTGACGACCCGTCCGGATGTTGCCTGGATCGTGG ATGTCGGAGGGCCGGATGGAGCATACGTCTTTGAGGTCGGGCTTAACGAAACGAAGGTTCGGATCGGGGACGGGGTCGTT GCCGCGGCGAACCACTTCGTCGACCCGAGCTGGGATCTGACGACCCCGCCCGGAGAACACTCGCTGACGAGATATGCGAA TCTGCTGAGTCAGGCGGAGGCGGCAAAGGGGTCGATCGATGCTGAAGAAATGATGCAGATCCGCGATGTGCTCATGACCG ACGACGGGGCGACCTTCCGTCACTCGGAGCTCTTTGGATACCCGTACTCTTCGAACCACCAGGTGGTATTCGTTCCGGCG ACCCGGACCCTGTGGATGAAGGTGATCGATCTGGACTGGCAGAAGGTGGAACTCGCTCCGCTGTTTGCGATGTGA
Upstream 100 bases:
>100_bases GATGTATAACATCGACCTCCGTTTCGCCTCCGGACAACCCCGAGATGACCTTTGTCTCTTCCTTTGAAGGGGGCGAGCGT ATCTTGCCGGCAACTACACC
Downstream 100 bases:
>100_bases GGGATCATCTCTCTCTTTTTGAAAAACGTTCTTTGATGTTGGATTAGGGAGTGGGTTCCCCCTCCGCCCGGTTCTCCCAC ATCTTCTCCGCCACCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MILLEGSYREMGRQYGGLMKTELLSEYAMLTKTLEDRGYSLDYLRWYASAGTQFQPERMKEITRGMAETTGLSEADLSIL YYGPALYISMPAGCSYLAVWDTYTTDGSVVLSRNWDLPDLLDPFNPYYVLAVCRPTDGSNGVATFGPAGSRPETLMNSAG LFIADDNSGLAPVGQDDRPDLISEFFRLMLDYSDLDGLKTGVLTTRPDVAWIVDVGGPDGAYVFEVGLNETKVRIGDGVV AAANHFVDPSWDLTTPPGEHSLTRYANLLSQAEAAKGSIDAEEMMQIRDVLMTDDGATFRHSELFGYPYSSNHQVVFVPA TRTLWMKVIDLDWQKVELAPLFAM
Sequences:
>Translated_344_residues MILLEGSYREMGRQYGGLMKTELLSEYAMLTKTLEDRGYSLDYLRWYASAGTQFQPERMKEITRGMAETTGLSEADLSIL YYGPALYISMPAGCSYLAVWDTYTTDGSVVLSRNWDLPDLLDPFNPYYVLAVCRPTDGSNGVATFGPAGSRPETLMNSAG LFIADDNSGLAPVGQDDRPDLISEFFRLMLDYSDLDGLKTGVLTTRPDVAWIVDVGGPDGAYVFEVGLNETKVRIGDGVV AAANHFVDPSWDLTTPPGEHSLTRYANLLSQAEAAKGSIDAEEMMQIRDVLMTDDGATFRHSELFGYPYSSNHQVVFVPA TRTLWMKVIDLDWQKVELAPLFAM >Mature_344_residues MILLEGSYREMGRQYGGLMKTELLSEYAMLTKTLEDRGYSLDYLRWYASAGTQFQPERMKEITRGMAETTGLSEADLSIL YYGPALYISMPAGCSYLAVWDTYTTDGSVVLSRNWDLPDLLDPFNPYYVLAVCRPTDGSNGVATFGPAGSRPETLMNSAG LFIADDNSGLAPVGQDDRPDLISEFFRLMLDYSDLDGLKTGVLTTRPDVAWIVDVGGPDGAYVFEVGLNETKVRIGDGVV AAANHFVDPSWDLTTPPGEHSLTRYANLLSQAEAAKGSIDAEEMMQIRDVLMTDDGATFRHSELFGYPYSSNHQVVFVPA TRTLWMKVIDLDWQKVELAPLFAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38054; Mature: 38054
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLEGSYREMGRQYGGLMKTELLSEYAMLTKTLEDRGYSLDYLRWYASAGTQFQPERMK CEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHH EITRGMAETTGLSEADLSILYYGPALYISMPAGCSYLAVWDTYTTDGSVVLSRNWDLPDL HHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCHHH LDPFNPYYVLAVCRPTDGSNGVATFGPAGSRPETLMNSAGLFIADDNSGLAPVGQDDRPD HCCCCCEEEEEEEECCCCCCCEEECCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCHH LISEFFRLMLDYSDLDGLKTGVLTTRPDVAWIVDVGGPDGAYVFEVGLNETKVRIGDGVV HHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCEE AAANHFVDPSWDLTTPPGEHSLTRYANLLSQAEAAKGSIDAEEMMQIRDVLMTDDGATFR EEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEE HSELFGYPYSSNHQVVFVPATRTLWMKVIDLDWQKVELAPLFAM CCEEECCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEEEEECC >Mature Secondary Structure MILLEGSYREMGRQYGGLMKTELLSEYAMLTKTLEDRGYSLDYLRWYASAGTQFQPERMK CEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHH EITRGMAETTGLSEADLSILYYGPALYISMPAGCSYLAVWDTYTTDGSVVLSRNWDLPDL HHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCHHH LDPFNPYYVLAVCRPTDGSNGVATFGPAGSRPETLMNSAGLFIADDNSGLAPVGQDDRPD HCCCCCEEEEEEEECCCCCCCEEECCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCHH LISEFFRLMLDYSDLDGLKTGVLTTRPDVAWIVDVGGPDGAYVFEVGLNETKVRIGDGVV HHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCEE AAANHFVDPSWDLTTPPGEHSLTRYANLLSQAEAAKGSIDAEEMMQIRDVLMTDDGATFR EEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEE HSELFGYPYSSNHQVVFVPATRTLWMKVIDLDWQKVELAPLFAM CCEEECCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA