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The map label for this gene is rps27e

Identifier: 124486119

GI number: 124486119

Start: 1326379

End: 1326567

Strand: Reverse

Name: rps27e

Synonym: Mlab_1300

Alternate gene names: 124486119

Gene position: 1326567-1326379 (Counterclockwise)

Preceding gene: 124486120

Following gene: 124486118

Centisome position: 73.5

GC content: 48.15

Gene sequence:

>189_bases
ATGGTAAAAGCATCCCGAGAAACCCGGAGCAAATTCCTGAAGGTAAAATGTCCGGACTGTGAAAATGAACAGCTCGTATT
CGAGAAAGCAACCTCCGTTGTTGAATGCACAGTCTGCGGCCGCATCCTTGCAGAGCCGACCGGCGGCAAAGCTGCTCTTA
AAGCAGATATCGTAGCAACATTTGAATAA

Upstream 100 bases:

>100_bases
CCAAGAAGATCAACATGCGCTACCGGTGCAAAGAATGCGGTAAAGCCCACTTAAGAGAAGGTTACCGTGCAGGTAAATTC
GAACTTACGGAGTGAGTAAT

Downstream 100 bases:

>100_bases
ATCTGGAAAATTATCTAATGAGTGAAAGAGATTGGCCAATAGAAGGAGAACTTGTCGTCTGCAGCGTTACAGAAGTCAAG
GACTTCGCGGCATTTGTAAA

Product: 30S ribosomal protein S27e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MVKASRETRSKFLKVKCPDCENEQLVFEKATSVVECTVCGRILAEPTGGKAALKADIVATFE

Sequences:

>Translated_62_residues
MVKASRETRSKFLKVKCPDCENEQLVFEKATSVVECTVCGRILAEPTGGKAALKADIVATFE
>Mature_62_residues
MVKASRETRSKFLKVKCPDCENEQLVFEKATSVVECTVCGRILAEPTGGKAALKADIVATFE

Specific function: Unknown

COG id: COG2051

COG function: function code J; Ribosomal protein S27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27_METLZ (A2ST12)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001030735.1
- ProteinModelPortal:   A2ST12
- SMR:   A2ST12
- STRING:   A2ST12
- GeneID:   4794725
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_1300
- eggNOG:   arNOG13249
- HOGENOM:   HBG392194
- OMA:   CIDCGNE
- PhylomeDB:   A2ST12
- ProtClustDB:   PRK00415
- BioCyc:   MLAB410358:MLAB_1300-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00371
- InterPro:   IPR000592
- InterPro:   IPR022959
- InterPro:   IPR011332
- PANTHER:   PTHR11594

Pfam domain/function: PF01667 Ribosomal_S27e; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6748; Mature: 6748

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS01168 RIBOSOMAL_S27E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKASRETRSKFLKVKCPDCENEQLVFEKATSVVECTVCGRILAEPTGGKAALKADIVAT
CCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEHEECCCEECCCCCCCEEEEEEEEEE
FE
CC
>Mature Secondary Structure
MVKASRETRSKFLKVKCPDCENEQLVFEKATSVVECTVCGRILAEPTGGKAALKADIVAT
CCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEHEECCCEECCCCCCCEEEEEEEEEE
FE
CC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA