Click here to switch to the map view.

The map label for this gene is 124486099

Identifier: 124486099

GI number: 124486099

Start: 1307305

End: 1308147

Strand: Reverse

Name: 124486099

Synonym: Mlab_1279

Alternate gene names: NA

Gene position: 1308147-1307305 (Counterclockwise)

Preceding gene: 124486102

Following gene: 124486098

Centisome position: 72.48

GC content: 48.16

Gene sequence:

>843_bases
ATGATTCGACTCGCTGCTTCTTCGATGTTCTTCCATGAATATGAACCACCGGAAATTTTTGCTGCAGTAAACAAAGCCGG
AGCTGATACTATTGAATTCTGGATGGAGACCCCTACATTCTGGTTGAGGGGAGCGCATGCATCGGAAGTGATCGAGATGC
TGCGGCTCTACCCGAATTTTGGAAATATCGCGATGCATTCCCCTGTTTTCGAACTGAATCCCTGTTCGTTCAATCCTAAA
GTCGCGGAGCTCACCGCAGAATATACCTTATCCTGCATGCATATTCTGGAAGAACTCGGCGGCGGTGTTCTAACCATCCA
TCCGGGAAAAAGAACGGCCAAACGTCCAATAAGCGCATTGGATAAGGAACGGTTTGCCCGTTATCTTACGAAAGTGGGAA
ATGCTGCTGTTGGGAGTTCCGTGACCGTGGCTCTTGAAAACATGCCTCCTGCGGTGAATGCGCATATGGTGACGGCTGAA
GAAATGTGCCAAGTTCTGGACGAATATTCCTGGCTCTCGTTCACGTGGGATTACGCCCATGCCTGTCTTGCAGGTGATCC
GTTTTCTTTTCCCAGGGAATGCGGTGAAAAAATCGTAAATATTCACACAAGCCGCGGGAGCAAAACATCGATGCACTCAC
CTCTTGCCGGAACACCCGAGGCTGCCGAACTGAAATCCGTTCTTTCAGAGATGAAATATAGCGGACTGATGACCTTCGAA
CTGGAAGATCTGAGTTTTGGACCGCATTCACATGCGGTTTGTCCGTATCCTTTCACCTATGATGAAAAAATTGCGATCCT
TACCCGTGAAGTGAACGAGTTTTCGGATTGCCGATGTATTTAA

Upstream 100 bases:

>100_bases
ACTCTTCGTTATCAAATGCCAGAGTCTTCTGCTGCGCTGTTCGCTTCTTTCCTGCCATATACCATACATTTAGTTGCTGA
CATGAGAAATATAACGGTCA

Downstream 100 bases:

>100_bases
GAAATGGTACGTATAAATAAATATAGAGATTTTAACCAATGGCTGTTTCCAGACATAAAAATAGATCTGCCGCATATGCG
GCGTGGACGTTATGGTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MIRLAASSMFFHEYEPPEIFAAVNKAGADTIEFWMETPTFWLRGAHASEVIEMLRLYPNFGNIAMHSPVFELNPCSFNPK
VAELTAEYTLSCMHILEELGGGVLTIHPGKRTAKRPISALDKERFARYLTKVGNAAVGSSVTVALENMPPAVNAHMVTAE
EMCQVLDEYSWLSFTWDYAHACLAGDPFSFPRECGEKIVNIHTSRGSKTSMHSPLAGTPEAAELKSVLSEMKYSGLMTFE
LEDLSFGPHSHAVCPYPFTYDEKIAILTREVNEFSDCRCI

Sequences:

>Translated_280_residues
MIRLAASSMFFHEYEPPEIFAAVNKAGADTIEFWMETPTFWLRGAHASEVIEMLRLYPNFGNIAMHSPVFELNPCSFNPK
VAELTAEYTLSCMHILEELGGGVLTIHPGKRTAKRPISALDKERFARYLTKVGNAAVGSSVTVALENMPPAVNAHMVTAE
EMCQVLDEYSWLSFTWDYAHACLAGDPFSFPRECGEKIVNIHTSRGSKTSMHSPLAGTPEAAELKSVLSEMKYSGLMTFE
LEDLSFGPHSHAVCPYPFTYDEKIAILTREVNEFSDCRCI
>Mature_280_residues
MIRLAASSMFFHEYEPPEIFAAVNKAGADTIEFWMETPTFWLRGAHASEVIEMLRLYPNFGNIAMHSPVFELNPCSFNPK
VAELTAEYTLSCMHILEELGGGVLTIHPGKRTAKRPISALDKERFARYLTKVGNAAVGSSVTVALENMPPAVNAHMVTAE
EMCQVLDEYSWLSFTWDYAHACLAGDPFSFPRECGEKIVNIHTSRGSKTSMHSPLAGTPEAAELKSVLSEMKYSGLMTFE
LEDLSFGPHSHAVCPYPFTYDEKIAILTREVNEFSDCRCI

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 31187; Mature: 31187

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLAASSMFFHEYEPPEIFAAVNKAGADTIEFWMETPTFWLRGAHASEVIEMLRLYPNF
CEEEECCHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCHHEEECCCHHHHHHHHHHCCCC
GNIAMHSPVFELNPCSFNPKVAELTAEYTLSCMHILEELGGGVLTIHPGKRTAKRPISAL
CCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
DKERFARYLTKVGNAAVGSSVTVALENMPPAVNAHMVTAEEMCQVLDEYSWLSFTWDYAH
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEECHHHHHHHHHCCCCEEEEHHHHH
ACLAGDPFSFPRECGEKIVNIHTSRGSKTSMHSPLAGTPEAAELKSVLSEMKYSGLMTFE
HHHCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE
LEDLSFGPHSHAVCPYPFTYDEKIAILTREVNEFSDCRCI
ECCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCC
>Mature Secondary Structure
MIRLAASSMFFHEYEPPEIFAAVNKAGADTIEFWMETPTFWLRGAHASEVIEMLRLYPNF
CEEEECCHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCHHEEECCCHHHHHHHHHHCCCC
GNIAMHSPVFELNPCSFNPKVAELTAEYTLSCMHILEELGGGVLTIHPGKRTAKRPISAL
CCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
DKERFARYLTKVGNAAVGSSVTVALENMPPAVNAHMVTAEEMCQVLDEYSWLSFTWDYAH
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEECHHHHHHHHHCCCCEEEEHHHHH
ACLAGDPFSFPRECGEKIVNIHTSRGSKTSMHSPLAGTPEAAELKSVLSEMKYSGLMTFE
HHHCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE
LEDLSFGPHSHAVCPYPFTYDEKIAILTREVNEFSDCRCI
ECCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]