| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486014
Identifier: 124486014
GI number: 124486014
Start: 1220053
End: 1220544
Strand: Reverse
Name: 124486014
Synonym: Mlab_1194
Alternate gene names: NA
Gene position: 1220544-1220053 (Counterclockwise)
Preceding gene: 124486016
Following gene: 124486013
Centisome position: 67.62
GC content: 57.72
Gene sequence:
>492_bases ATGACAGCAGATTTCATTCAGACAGCAGTCTCGAAGTCCTCGAAGAGGACCTTCACCGCAGAGTTTACGAACGCCGCCGC GTATGATGCGATCGTCGCAGAAATTACGGGCGAGACAAATCCTCTCGGCCTTGCGGAAGTGGAACTTGGGAAGGAAACCT ACAAGACCTATGTCGGCTACTTCGATCCAAACACTTCCGAGATGAACGGCAAGGTCCAGGTTACGGCATTCAGCAGAGCT GAATATACGGCCGCAGTCACCGCCCTTACCGGCAGTGCGGACCTCAAGACCGCATTCGGGAACGGCGGTACCGCAGAGAC CTCCGAGATCGGTACCGAAGCAACGTGGAACGTCCGCATTTCCGCGAAGCTTGGGACCGACACGTTCCAGATCAGCTTCA ACCGGGATTCGATGATCGTCTCCGGCTATGCTGACGACGCCACCCTCGCCGCAGTCGAGACCTGGGCGGACACGATGCCC GGCCTCTGCTGA
Upstream 100 bases:
>100_bases TTTTGAGAAAAATCCGCAAAAACTTTACCGCTATCCCCCACCCCCTCTAAGAATATAATCAGAGGTTGGACGGGGCCCCA GCTGATCTCGGGACAAAACC
Downstream 100 bases:
>100_bases AGGGAGGCGGAGATGCAGATCTCCCGCCGGCTTAGGAAGCTGATCCTTGTGTTCCTCGGGTTTCTCATTATGCTTTTTGG GAAGATGGTTGAGGAAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTADFIQTAVSKSSKRTFTAEFTNAAAYDAIVAEITGETNPLGLAEVELGKETYKTYVGYFDPNTSEMNGKVQVTAFSRA EYTAAVTALTGSADLKTAFGNGGTAETSEIGTEATWNVRISAKLGTDTFQISFNRDSMIVSGYADDATLAAVETWADTMP GLC
Sequences:
>Translated_163_residues MTADFIQTAVSKSSKRTFTAEFTNAAAYDAIVAEITGETNPLGLAEVELGKETYKTYVGYFDPNTSEMNGKVQVTAFSRA EYTAAVTALTGSADLKTAFGNGGTAETSEIGTEATWNVRISAKLGTDTFQISFNRDSMIVSGYADDATLAAVETWADTMP GLC >Mature_162_residues TADFIQTAVSKSSKRTFTAEFTNAAAYDAIVAEITGETNPLGLAEVELGKETYKTYVGYFDPNTSEMNGKVQVTAFSRAE YTAAVTALTGSADLKTAFGNGGTAETSEIGTEATWNVRISAKLGTDTFQISFNRDSMIVSGYADDATLAAVETWADTMPG LC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17277; Mature: 17146
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADFIQTAVSKSSKRTFTAEFTNAAAYDAIVAEITGETNPLGLAEVELGKETYKTYVGY CCHHHHHHHHCCCCCEEEEEECCCCHHHHEEEEEECCCCCCCEEEEEECCHHHHEEEEEE FDPNTSEMNGKVQVTAFSRAEYTAAVTALTGSADLKTAFGNGGTAETSEIGTEATWNVRI ECCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCEEEECCCCCCCCCHHCCCCEEEEEEE SAKLGTDTFQISFNRDSMIVSGYADDATLAAVETWADTMPGLC EEEECCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TADFIQTAVSKSSKRTFTAEFTNAAAYDAIVAEITGETNPLGLAEVELGKETYKTYVGY CHHHHHHHHCCCCCEEEEEECCCCHHHHEEEEEECCCCCCCEEEEEECCHHHHEEEEEE FDPNTSEMNGKVQVTAFSRAEYTAAVTALTGSADLKTAFGNGGTAETSEIGTEATWNVRI ECCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCEEEECCCCCCCCCHHCCCCEEEEEEE SAKLGTDTFQISFNRDSMIVSGYADDATLAAVETWADTMPGLC EEEECCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA