| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485963
Identifier: 124485963
GI number: 124485963
Start: 1158281
End: 1158697
Strand: Reverse
Name: 124485963
Synonym: Mlab_1143
Alternate gene names: NA
Gene position: 1158697-1158281 (Counterclockwise)
Preceding gene: 124485964
Following gene: 124485962
Centisome position: 64.2
GC content: 52.76
Gene sequence:
>417_bases ATGAAACAGATGACAGCAAACCACCTGACCGATGCAGAGGTCATTGCAGAGTTTAAGAAAGACGATTGCTGGGGTCTTTG CACCTCTATCGACCTGAAAGAGTGCGACCCGGCAACAATCCGTGACGCAGAGAAGATCCACCAGTTCGTTCTCGAACTGG CGGACCTGATCGACATGAAACGCTTCGGCGAACCGCAGATCATTCACTTCGGACCAAACGAGAGAGTCGCCGGGTATTCG ATGACCCAGCTCATTGAGACCTCTCTCCTCTCGGCACACTTCGCCAACGACACCAACGCAGCCTATATCGATATCTTCAG CTGCAAAGAGTATGCCCCCTCGGTTGCCGCAGAGTTCTGCCGCAAGTTCTTCGGTGCGAAGAGAATGAACAACACCGTGT TCTTCCGCTCCATCTAA
Upstream 100 bases:
>100_bases CCGGTGCTAAACCTCATAGATGAAGCCCCAGGCGACGGAGTCTGAGGCGGTATGCAGCCCGACAGGGAGGCAGGCACGCC ACGCTGGAAGGACTTTATCT
Downstream 100 bases:
>100_bases GTGCGCTCTCTGCCCCCTCAAAATATTTTTTTTATTTCTTTTATGTTCTGGTCTTTTTTCGGGGACCTCTCTTCCTGCTG CATGCCGGTATCATCGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: S-Adenosylmethionine Decarboxylase-Like Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKQMTANHLTDAEVIAEFKKDDCWGLCTSIDLKECDPATIRDAEKIHQFVLELADLIDMKRFGEPQIIHFGPNERVAGYS MTQLIETSLLSAHFANDTNAAYIDIFSCKEYAPSVAAEFCRKFFGAKRMNNTVFFRSI
Sequences:
>Translated_138_residues MKQMTANHLTDAEVIAEFKKDDCWGLCTSIDLKECDPATIRDAEKIHQFVLELADLIDMKRFGEPQIIHFGPNERVAGYS MTQLIETSLLSAHFANDTNAAYIDIFSCKEYAPSVAAEFCRKFFGAKRMNNTVFFRSI >Mature_138_residues MKQMTANHLTDAEVIAEFKKDDCWGLCTSIDLKECDPATIRDAEKIHQFVLELADLIDMKRFGEPQIIHFGPNERVAGYS MTQLIETSLLSAHFANDTNAAYIDIFSCKEYAPSVAAEFCRKFFGAKRMNNTVFFRSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15680; Mature: 15680
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQMTANHLTDAEVIAEFKKDDCWGLCTSIDLKECDPATIRDAEKIHQFVLELADLIDMK CCCCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RFGEPQIIHFGPNERVAGYSMTQLIETSLLSAHFANDTNAAYIDIFSCKEYAPSVAAEFC HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCHHHHHHHH RKFFGAKRMNNTVFFRSI HHHHCHHHCCCEEEEEEC >Mature Secondary Structure MKQMTANHLTDAEVIAEFKKDDCWGLCTSIDLKECDPATIRDAEKIHQFVLELADLIDMK CCCCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RFGEPQIIHFGPNERVAGYSMTQLIETSLLSAHFANDTNAAYIDIFSCKEYAPSVAAEFC HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCHHHHHHHH RKFFGAKRMNNTVFFRSI HHHHCHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA