Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485833

Identifier: 124485833

GI number: 124485833

Start: 1021829

End: 1022545

Strand: Reverse

Name: 124485833

Synonym: Mlab_1013

Alternate gene names: NA

Gene position: 1022545-1021829 (Counterclockwise)

Preceding gene: 124485834

Following gene: 124485832

Centisome position: 56.65

GC content: 54.67

Gene sequence:

>717_bases
ATGGGCACTGAAAAACCTATTAATTATTTTTACAGGATAGATGCAATCATGGATACCAGAATGAAATTCTTAGAGCACGA
ACTTGCCGAACAGGAACGCGGGCTCGCCGGCAAGCAGGAAACCGTACAGGCGACTGCCGAAAAATCGGAAAATACTGAGG
AACTTGAACGCAAAATCCGTGAACTCGAGATAATGGTCAAAGGACTTACCGAGGAACTTCTCGATCTGAAGTCCGTGACC
CGCAAACTCAGCGTCCAGGTGGAAAAACTCGGCGGAACCCCGGTCAAAAGTCATCCGGAAGCATCCCGCTTCGGTGTCCG
GAGAGGGGAAGTCGTCGCCGAGCCGGTTGCAGAACCTGTTTCCGCTCGCTCTGAGGTTCCGGCTTCAAAGAGTACTCCAG
CCCCCAGACGATCTCCAGTCGAAGCCCCGGCTCCCCGCATGAGTCGTCCGGCTCCCGCACCGGCAGCGGAGCCGGTTCGC
GCCTCTGCCCCCGTCACTCCCGATGTACCGGTCGAGAATCTGAAACCCGGCGAGTTTGAATATGTAATGCAGCAGGACGG
AACGATCCAGAAACGGAGAAAAACGACCGATCACAACGTTATCATCGCAGGTACCGGCTTCAATCCGTCCCGTGCCTCAC
ACTCGATGTCTATTCGTGCCGACTCTTCGGCGGTTATCGAAGCTGAGGATGACGACACGGTGGAAATCAAGCGTTAA

Upstream 100 bases:

>100_bases
CATCTTTGCATGTCCCGAATCTCCCGATTACTGTTATAATCTTTTGATTCTGCCTCGCATTTGTGGTATCTGTCCGGCCG
TTCCACAAGTGTATTATACA

Downstream 100 bases:

>100_bases
CGGAGTTCATTCGTGCACATTGTCCAGGTTGACATCGACAACTTCAAGTCTTTTTCCAGAAAGACAAAAATTCCCTTTTA
TGAAGGATTTACTGTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGTEKPINYFYRIDAIMDTRMKFLEHELAEQERGLAGKQETVQATAEKSENTEELERKIRELEIMVKGLTEELLDLKSVT
RKLSVQVEKLGGTPVKSHPEASRFGVRRGEVVAEPVAEPVSARSEVPASKSTPAPRRSPVEAPAPRMSRPAPAPAAEPVR
ASAPVTPDVPVENLKPGEFEYVMQQDGTIQKRRKTTDHNVIIAGTGFNPSRASHSMSIRADSSAVIEAEDDDTVEIKR

Sequences:

>Translated_238_residues
MGTEKPINYFYRIDAIMDTRMKFLEHELAEQERGLAGKQETVQATAEKSENTEELERKIRELEIMVKGLTEELLDLKSVT
RKLSVQVEKLGGTPVKSHPEASRFGVRRGEVVAEPVAEPVSARSEVPASKSTPAPRRSPVEAPAPRMSRPAPAPAAEPVR
ASAPVTPDVPVENLKPGEFEYVMQQDGTIQKRRKTTDHNVIIAGTGFNPSRASHSMSIRADSSAVIEAEDDDTVEIKR
>Mature_237_residues
GTEKPINYFYRIDAIMDTRMKFLEHELAEQERGLAGKQETVQATAEKSENTEELERKIRELEIMVKGLTEELLDLKSVTR
KLSVQVEKLGGTPVKSHPEASRFGVRRGEVVAEPVAEPVSARSEVPASKSTPAPRRSPVEAPAPRMSRPAPAPAAEPVRA
SAPVTPDVPVENLKPGEFEYVMQQDGTIQKRRKTTDHNVIIAGTGFNPSRASHSMSIRADSSAVIEAEDDDTVEIKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26221; Mature: 26090

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTEKPINYFYRIDAIMDTRMKFLEHELAEQERGLAGKQETVQATAEKSENTEELERKIR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
ELEIMVKGLTEELLDLKSVTRKLSVQVEKLGGTPVKSHPEASRFGVRRGEVVAEPVAEPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHH
SARSEVPASKSTPAPRRSPVEAPAPRMSRPAPAPAAEPVRASAPVTPDVPVENLKPGEFE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
YVMQQDGTIQKRRKTTDHNVIIAGTGFNPSRASHSMSIRADSSAVIEAEDDDTVEIKR
EEECCCCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCEEEECC
>Mature Secondary Structure 
GTEKPINYFYRIDAIMDTRMKFLEHELAEQERGLAGKQETVQATAEKSENTEELERKIR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
ELEIMVKGLTEELLDLKSVTRKLSVQVEKLGGTPVKSHPEASRFGVRRGEVVAEPVAEPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHH
SARSEVPASKSTPAPRRSPVEAPAPRMSRPAPAPAAEPVRASAPVTPDVPVENLKPGEFE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
YVMQQDGTIQKRRKTTDHNVIIAGTGFNPSRASHSMSIRADSSAVIEAEDDDTVEIKR
EEECCCCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA