Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485761

Identifier: 124485761

GI number: 124485761

Start: 936838

End: 937764

Strand: Reverse

Name: 124485761

Synonym: Mlab_0940

Alternate gene names: NA

Gene position: 937764-936838 (Counterclockwise)

Preceding gene: 124485762

Following gene: 124485759

Centisome position: 51.95

GC content: 47.03

Gene sequence:

>927_bases
ATGGAAGAAGGGAAATGCCCTATATGTGGACAACATTGTTATATACATGCAAGAGCCGGGAGTAATGTTCCCACATACAA
ATGTGATTTCTGTTTTGCCTATGAACTTGCAGATGAGGATATCCCTCTGGCCCAAGAACATAAGGTGGTTCTTGCCGGAT
ATCTGTTTGAAACCCGCAGCAGATCCCATTCGATACGGATCAATGCAGGTACCCTCCCCATTATACTCTCCGATTCCCGT
ATTCCAAAAACTCCCCTGCAGAAACTGGATAAACTTATTCTGTCGATTTACGATCTGGGATCGGGATTCAAGAACCATAT
CTCGAAACTGGCCAAATATCCCCCTGCAGTCGGCTATGCAGAAGATGCCGCCGAGTTCAATCTTATGGTCTCCACGCTGA
ACGATATCGGATATCTCCGGGAACGTCAGGCCCGTTTCGGCGAATACGACTGCGGGTATTTTATCACCATCGAGGGAATG
AAATACGCTGAATCTCTTCTTTCGGGCAATACCCGGTCCACTACTGTCTTTGTCGCCATGCAGTGCACCGACGATCTCAA
ACCGGTGTATGAAAAGGGGGTCAAGGCCGCGTGCGATGTGTTTGGTCTTTCCATCTCTATCGTCGATACAACAGAAAACA
AGGAAAACATTGCGGATAAAATCATTGCCGGCATCAAAACCAGCCGTTTTGTTATCGCAGACTTCACCAATAATGCTCTC
GGTGTCTATTATGAAGCTGGGTATGCTAAAGGACTCGGGCGCGAAGTAATCAAAACCTGCAGAAAGGCGTGGTTTGAAGA
GGAAAAAGACGGGAAACGGGTAAATCGGCTCTACTTCGATATGGAACGCGACAATCTCATTTTATGGCAGGATGAAAAGG
ATCTGAAGAGGAAGCTCGAGGATCGTATCCGTGCAGTGCTTCTCTAA

Upstream 100 bases:

>100_bases
TATCGGAGCAAATTCAACGGTTATATTACTATGAATTTCCCATATCTTCGGATGAAATATTATCGGGAACGAACGTTTCG
GTAATAGAATGGAGAATATC

Downstream 100 bases:

>100_bases
ACGGCGTTCAAAAAAATTATTTTTTTCAAAAAAATTCAGAAAATATTCAGGGCAGTTTGATCGTCCCGACGATCCGGAGT
TTACCCCCGTCCAGATAATG

Product: molydopterin dinucleotide-binding region

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MEEGKCPICGQHCYIHARAGSNVPTYKCDFCFAYELADEDIPLAQEHKVVLAGYLFETRSRSHSIRINAGTLPIILSDSR
IPKTPLQKLDKLILSIYDLGSGFKNHISKLAKYPPAVGYAEDAAEFNLMVSTLNDIGYLRERQARFGEYDCGYFITIEGM
KYAESLLSGNTRSTTVFVAMQCTDDLKPVYEKGVKAACDVFGLSISIVDTTENKENIADKIIAGIKTSRFVIADFTNNAL
GVYYEAGYAKGLGREVIKTCRKAWFEEEKDGKRVNRLYFDMERDNLILWQDEKDLKRKLEDRIRAVLL

Sequences:

>Translated_308_residues
MEEGKCPICGQHCYIHARAGSNVPTYKCDFCFAYELADEDIPLAQEHKVVLAGYLFETRSRSHSIRINAGTLPIILSDSR
IPKTPLQKLDKLILSIYDLGSGFKNHISKLAKYPPAVGYAEDAAEFNLMVSTLNDIGYLRERQARFGEYDCGYFITIEGM
KYAESLLSGNTRSTTVFVAMQCTDDLKPVYEKGVKAACDVFGLSISIVDTTENKENIADKIIAGIKTSRFVIADFTNNAL
GVYYEAGYAKGLGREVIKTCRKAWFEEEKDGKRVNRLYFDMERDNLILWQDEKDLKRKLEDRIRAVLL
>Mature_308_residues
MEEGKCPICGQHCYIHARAGSNVPTYKCDFCFAYELADEDIPLAQEHKVVLAGYLFETRSRSHSIRINAGTLPIILSDSR
IPKTPLQKLDKLILSIYDLGSGFKNHISKLAKYPPAVGYAEDAAEFNLMVSTLNDIGYLRERQARFGEYDCGYFITIEGM
KYAESLLSGNTRSTTVFVAMQCTDDLKPVYEKGVKAACDVFGLSISIVDTTENKENIADKIIAGIKTSRFVIADFTNNAL
GVYYEAGYAKGLGREVIKTCRKAWFEEEKDGKRVNRLYFDMERDNLILWQDEKDLKRKLEDRIRAVLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34826; Mature: 34826

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEGKCPICGQHCYIHARAGSNVPTYKCDFCFAYELADEDIPLAQEHKVVLAGYLFETRS
CCCCCCCEECCEEEEEEECCCCCCCEEECEEEEEEECCCCCCCCCCCCEEEEEEEHHHCC
RSHSIRINAGTLPIILSDSRIPKTPLQKLDKLILSIYDLGSGFKNHISKLAKYPPAVGYA
CCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
EDAAEFNLMVSTLNDIGYLRERQARFGEYDCGYFITIEGMKYAESLLSGNTRSTTVFVAM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEEEE
QCTDDLKPVYEKGVKAACDVFGLSISIVDTTENKENIADKIIAGIKTSRFVIADFTNNAL
ECCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCE
GVYYEAGYAKGLGREVIKTCRKAWFEEEKDGKRVNRLYFDMERDNLILWQDEKDLKRKLE
EEEEECCHHCCCCHHHHHHHHHHHCCCCCCCCCEEHEEEEECCCCEEEEECCHHHHHHHH
DRIRAVLL
HHHHHHCC
>Mature Secondary Structure
MEEGKCPICGQHCYIHARAGSNVPTYKCDFCFAYELADEDIPLAQEHKVVLAGYLFETRS
CCCCCCCEECCEEEEEEECCCCCCCEEECEEEEEEECCCCCCCCCCCCEEEEEEEHHHCC
RSHSIRINAGTLPIILSDSRIPKTPLQKLDKLILSIYDLGSGFKNHISKLAKYPPAVGYA
CCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
EDAAEFNLMVSTLNDIGYLRERQARFGEYDCGYFITIEGMKYAESLLSGNTRSTTVFVAM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEEEE
QCTDDLKPVYEKGVKAACDVFGLSISIVDTTENKENIADKIIAGIKTSRFVIADFTNNAL
ECCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCE
GVYYEAGYAKGLGREVIKTCRKAWFEEEKDGKRVNRLYFDMERDNLILWQDEKDLKRKLE
EEEEECCHHCCCCHHHHHHHHHHHCCCCCCCCCEEHEEEEECCCCEEEEECCHHHHHHHH
DRIRAVLL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA