| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485330
Identifier: 124485330
GI number: 124485330
Start: 476820
End: 477446
Strand: Reverse
Name: 124485330
Synonym: Mlab_0505
Alternate gene names: NA
Gene position: 477446-476820 (Counterclockwise)
Preceding gene: 124485331
Following gene: 124485321
Centisome position: 26.45
GC content: 51.36
Gene sequence:
>627_bases ATGGAGAAAATAGATTATAAAAAAGCATTTCCTGATCTGTATAAGCCGAAGACGAGCCCGTCCGCGGTGGATGTTCCGCC CATGACCTTCATTATGGTCGACGGGAAAGGAAATCCGAACGATCCAAACGGTGAGTATCCCTGTGCGGTCGAGCTGCTCT ACGGTCTTTCATACACGATCAAAATGAACAAAAAAGGGGAGACGAGGCCGAACGGCTACTTTGAGTATGTCGTGCCTCCG CTTGAAGGGTTGTGGAGTCTGGACGACTCTGCCGACTTCAAAAACAAAGATACGTTCCTCTGGACATCCATGATCCGCCA GCCGGAGTTCGTGACGGCTGAGGTGTTTGCAGAAACATGCCCCATGGTCGAAGAAAAGAAGCATCTGGATACGGCAAAGG CGCGGCTCGAGATCTTTTCCGAAGGTCTTTGTGTCCAGTGCATGCATATAGGGCCCTTCGACGATGAACCGGCGACGCTT GACAAGATGGATGCCTTCATCCGCGAAAACGGTTTTGTCCATGACTTCGCCGGCCGCCGGCATCATGAGATTTATCTTTC GGATCCGCGAAAAACCGAACCAGCGAAGATGAAGACCATCCTTCGGGTGCCGGTAAAAAAAGCGTGA
Upstream 100 bases:
>100_bases ATAAGATGTGTGCCGAGTGCCCGCATTTTGGAAAATGGGTTTCCTGGATCAAAACGCTCCCTGAAACGGCAAAACAAACC GAACGTGAGAAGTAAGAAAA
Downstream 100 bases:
>100_bases GTGTTTATCCGTTTTTCCGGATGAACAGTTCCGTTCTACTGCGGATCTCTTCGGGGGAGAGAGGGATATTGGGGGACGCC GAGTTTTCCGGGCGTATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEKIDYKKAFPDLYKPKTSPSAVDVPPMTFIMVDGKGNPNDPNGEYPCAVELLYGLSYTIKMNKKGETRPNGYFEYVVPP LEGLWSLDDSADFKNKDTFLWTSMIRQPEFVTAEVFAETCPMVEEKKHLDTAKARLEIFSEGLCVQCMHIGPFDDEPATL DKMDAFIRENGFVHDFAGRRHHEIYLSDPRKTEPAKMKTILRVPVKKA
Sequences:
>Translated_208_residues MEKIDYKKAFPDLYKPKTSPSAVDVPPMTFIMVDGKGNPNDPNGEYPCAVELLYGLSYTIKMNKKGETRPNGYFEYVVPP LEGLWSLDDSADFKNKDTFLWTSMIRQPEFVTAEVFAETCPMVEEKKHLDTAKARLEIFSEGLCVQCMHIGPFDDEPATL DKMDAFIRENGFVHDFAGRRHHEIYLSDPRKTEPAKMKTILRVPVKKA >Mature_208_residues MEKIDYKKAFPDLYKPKTSPSAVDVPPMTFIMVDGKGNPNDPNGEYPCAVELLYGLSYTIKMNKKGETRPNGYFEYVVPP LEGLWSLDDSADFKNKDTFLWTSMIRQPEFVTAEVFAETCPMVEEKKHLDTAKARLEIFSEGLCVQCMHIGPFDDEPATL DKMDAFIRENGFVHDFAGRRHHEIYLSDPRKTEPAKMKTILRVPVKKA
Specific function: Unknown
COG id: COG4832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23746; Mature: 23746
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIDYKKAFPDLYKPKTSPSAVDVPPMTFIMVDGKGNPNDPNGEYPCAVELLYGLSYTI CCCCCCHHHCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHEECCCEEEE KMNKKGETRPNGYFEYVVPPLEGLWSLDDSADFKNKDTFLWTSMIRQPEFVTAEVFAETC EECCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHC PMVEEKKHLDTAKARLEIFSEGLCVQCMHIGPFDDEPATLDKMDAFIRENGFVHDFAGRR CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCE HHEIYLSDPRKTEPAKMKTILRVPVKKA EEEEEECCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MEKIDYKKAFPDLYKPKTSPSAVDVPPMTFIMVDGKGNPNDPNGEYPCAVELLYGLSYTI CCCCCCHHHCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHEECCCEEEE KMNKKGETRPNGYFEYVVPPLEGLWSLDDSADFKNKDTFLWTSMIRQPEFVTAEVFAETC EECCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHC PMVEEKKHLDTAKARLEIFSEGLCVQCMHIGPFDDEPATLDKMDAFIRENGFVHDFAGRR CCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCE HHEIYLSDPRKTEPAKMKTILRVPVKKA EEEEEECCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA