| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is panE [C]
Identifier: 124485202
GI number: 124485202
Start: 352474
End: 353382
Strand: Reverse
Name: panE [C]
Synonym: Mlab_0375
Alternate gene names: 124485202
Gene position: 353382-352474 (Counterclockwise)
Preceding gene: 124485209
Following gene: 124485201
Centisome position: 19.58
GC content: 48.07
Gene sequence:
>909_bases ATGAGGATATTAATACTTGGTGCCGGAGCAGTAGGGCTGTCAGTCGCCGCAAAATTATCGAAATATGCCGAAGTTTTTGC AGTATGCCGGGAAAGATGCAGTACGTCTATCGAAAAGGATGGCTTTTTTCTAACAGGGATCTGGGGGACGGAAACATTCC GGTTTCCCTGCGGAGTAACTCCCCCGGAAGGGCCCTGGGATTATATCATTATATCCACCAAAGCTGCCGCCACACGCGAA ATATGTGAAAAATATAATCATCTGTTCGGTGAGGCCGAGGTCGTGAGTCTCCAGAACGGAATCGGAAATGAAGAGGTCAT TGCCGAATATACCGACCATGTGATCGGCGCAATGATTATTACCGGATTTGAATGGAAAGCAGACAATGCGGTGTTCGTAT CAGTCGACGGCGGAGCCACAGTCTTTGGAAGATATACGGGAGGAGCTGATCGAAAAGCGGAACTCCTGTCTGATCTCTTC AACAAAGCAGGCATGCGGGCGAGCGCCACGGATAATATCAAAGGGACCATCTGGTCAAAAGCATTGTACAGCTGCTCGCT GAATCCTCTTGGGGCAGTTATGGAATGCCCTTACGGAGATCTCCTCAGAGAACCCGCATGGAATATCATTATTAACATAG TGCATGAAGCGTTCGAAGTGGCACGCGCAGAAAATATCTCACTTGTACAAAAAACAGCGAATGAATATCTTGAGTTCCTG AAGACAGCGAAGATCCCCCCAACGGCCGCACATTTTTCCTCAATGTATCAGGACATAGCTGCCGGCCGCAAAACCGAGGT TGACTTTATCAATGGAGCCATAGTTTCACTTGGCAGGAGACACGGCATCCCAACTCCCGTGAATGAAACGATCGTCAATT TAACTCACTTCAAAGAGGAGCTTTCATGA
Upstream 100 bases:
>100_bases TTACACCAAAAATTCACAAGTTTTGCATCCGACATACGGGCTGCCCACATCAGGAAAACCCTGCTTTTAATGTGGTGAAG AGACAATATAATAAGAACAA
Downstream 100 bases:
>100_bases CGGCAAAACGATCCGCGATGATCCTTGCAGGCGGTGAGGCACGAAGAGTAAACGGACGCGAAAAGTATTTGTTTTCTTAC CAAGGCTGCTCATTTATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRILILGAGAVGLSVAAKLSKYAEVFAVCRERCSTSIEKDGFFLTGIWGTETFRFPCGVTPPEGPWDYIIISTKAAATRE ICEKYNHLFGEAEVVSLQNGIGNEEVIAEYTDHVIGAMIITGFEWKADNAVFVSVDGGATVFGRYTGGADRKAELLSDLF NKAGMRASATDNIKGTIWSKALYSCSLNPLGAVMECPYGDLLREPAWNIIINIVHEAFEVARAENISLVQKTANEYLEFL KTAKIPPTAAHFSSMYQDIAAGRKTEVDFINGAIVSLGRRHGIPTPVNETIVNLTHFKEELS
Sequences:
>Translated_302_residues MRILILGAGAVGLSVAAKLSKYAEVFAVCRERCSTSIEKDGFFLTGIWGTETFRFPCGVTPPEGPWDYIIISTKAAATRE ICEKYNHLFGEAEVVSLQNGIGNEEVIAEYTDHVIGAMIITGFEWKADNAVFVSVDGGATVFGRYTGGADRKAELLSDLF NKAGMRASATDNIKGTIWSKALYSCSLNPLGAVMECPYGDLLREPAWNIIINIVHEAFEVARAENISLVQKTANEYLEFL KTAKIPPTAAHFSSMYQDIAAGRKTEVDFINGAIVSLGRRHGIPTPVNETIVNLTHFKEELS >Mature_302_residues MRILILGAGAVGLSVAAKLSKYAEVFAVCRERCSTSIEKDGFFLTGIWGTETFRFPCGVTPPEGPWDYIIISTKAAATRE ICEKYNHLFGEAEVVSLQNGIGNEEVIAEYTDHVIGAMIITGFEWKADNAVFVSVDGGATVFGRYTGGADRKAELLSDLF NKAGMRASATDNIKGTIWSKALYSCSLNPLGAVMECPYGDLLREPAWNIIINIVHEAFEVARAENISLVQKTANEYLEFL KTAKIPPTAAHFSSMYQDIAAGRKTEVDFINGAIVSLGRRHGIPTPVNETIVNLTHFKEELS
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
Organism=Escherichia coli, GI1786627, Length=307, Percent_Identity=27.6872964169381, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 32952; Mature: 32952
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILILGAGAVGLSVAAKLSKYAEVFAVCRERCSTSIEKDGFFLTGIWGTETFRFPCGVT CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCCCC PPEGPWDYIIISTKAAATREICEKYNHLFGEAEVVSLQNGIGNEEVIAEYTDHVIGAMII CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH TGFEWKADNAVFVSVDGGATVFGRYTGGADRKAELLSDLFNKAGMRASATDNIKGTIWSK CCCEECCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ALYSCSLNPLGAVMECPYGDLLREPAWNIIINIVHEAFEVARAENISLVQKTANEYLEFL HHHHCCCCCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KTAKIPPTAAHFSSMYQDIAAGRKTEVDFINGAIVSLGRRHGIPTPVNETIVNLTHFKEE HHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LS CC >Mature Secondary Structure MRILILGAGAVGLSVAAKLSKYAEVFAVCRERCSTSIEKDGFFLTGIWGTETFRFPCGVT CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCCCC PPEGPWDYIIISTKAAATREICEKYNHLFGEAEVVSLQNGIGNEEVIAEYTDHVIGAMII CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH TGFEWKADNAVFVSVDGGATVFGRYTGGADRKAELLSDLFNKAGMRASATDNIKGTIWSK CCCEECCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ALYSCSLNPLGAVMECPYGDLLREPAWNIIINIVHEAFEVARAENISLVQKTANEYLEFL HHHHCCCCCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KTAKIPPTAAHFSSMYQDIAAGRKTEVDFINGAIVSLGRRHGIPTPVNETIVNLTHFKEE HHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]