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The map label for this gene is 124485188

Identifier: 124485188

GI number: 124485188

Start: 339638

End: 340942

Strand: Reverse

Name: 124485188

Synonym: Mlab_0361

Alternate gene names: NA

Gene position: 340942-339638 (Counterclockwise)

Preceding gene: 124485189

Following gene: 124485186

Centisome position: 18.89

GC content: 50.5

Gene sequence:

>1305_bases
ATGTATTCAATTGACAGTATCAAATATCTCATTCATATCCATATCGAAGCAGAAGGGGTGGTTGAAAAAACCGACGTAGT
CGGGGCCATATTCGGCCAAACCGAGGGGCTTCTCGGCGAAGAACTCGACCTCCGCGATTTGCAGCGGAGCGGTCGGATCG
GCCGGATAGATGTCCAGATAGTTAGCAAACACGGAAAAACAGCAGGCGAGTGCTACATCGCATCCTCCCTTGATCGAGCA
GAAACCGCGATATTAGCTGCTGCTCTGGAAACTATCGACCGTATCGGCCCGTGCATGGCGGCAATACGGATCCAGAACAT
TGAGGATCTACGGGCAATCAAACGCCGGCAGATAGTTGAACGGGCCAAGGAGCTTCTCCTCGAATCCTTTGACGAGGTAG
GGATCTCTACCTATGACATCCTTACAGAGGTCAGAGAAGCAAGCAGGGTCGAAAAGATCACGACAATTGGACCCGAACGA
CTCCCCGCAGGACCTGCCGTTCTGGAATCGGACGCGATCATCATCGTCGAGGGAAGAGCAGACGTCCTGAATCTTTTAAA
GTGCGGTATTAATAATACCGTGGCAGTCGAAGGAACCAAGGTTCCGGAAACGGTCATTGACTTGTCCGCCAAGAAAAACA
CCACCGTATTTGTTGACGGGGACAGAGGAGGAGATCTGATCCTGCGGGAACTCCTTCAGGTCGCCGATATCGATTTCGTG
GCATTTTCTCCCCGCAGAAGAAGCGTAGAGGACATGAGCCGAAAGGAGATCGTCAAATCTCTCAGAAACAAGGTCCCGGC
ATCGGTTCTGAAAAGCCATATCGAGAAGGATGAACCTATCTCCGACCTCGTCTTCGAGATTGAGGCAGGGGAAGAGGAAC
ATAGTTCTGTTTCACAAAAAGAGGAGGGAAATAATACCACTCCTGATGTCCCCGCAGATCTGCCGGAAGAACCTCCCAAA
AGTAACATTGATGAGGCCATAATTCCTCCAATCACCACATCGGAACAAAACCTGGTTAAACCGGAAAATCCGCACACAAT
TCAGGAACACACCCAGTATATGAAAAATACGGGACGAAGCAGGGTTCTCGCGGAGGATGCTGGGGTGATCGGCGATTATT
CACTTCAGGAACTCAAGGCAATCCTGCCGAAACTGAATGACGATGTGGCCGGTGTTATTGTGGACGCAGCCGTCGATCAG
AAGTTCATCGATCAGGCTTTTGCAAAAGGTCTGACATATGTCGCTGCAAATGCATTTGAAGGAATCGTCCGAAGACCCGC
AGGTCTCAGGTTGATCCCCTTCTAA

Upstream 100 bases:

>100_bases
AAAGATTTTTCCAACATGTTGCTTAAGTAGTAGAAGAATAAATATATCCCGTACCTATGGATTTTCATCACATTCACTCA
CACATCCATGGAGGCTTTAC

Downstream 100 bases:

>100_bases
CTCAAAAACGTTTTTTATCCGCACAGAACCGGCCGATGATATCCATATACTCCTCGGGTCGGTTCATAACATCCAAAGTA
TCAGTCGTGCCGACCATGCC

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MYSIDSIKYLIHIHIEAEGVVEKTDVVGAIFGQTEGLLGEELDLRDLQRSGRIGRIDVQIVSKHGKTAGECYIASSLDRA
ETAILAAALETIDRIGPCMAAIRIQNIEDLRAIKRRQIVERAKELLLESFDEVGISTYDILTEVREASRVEKITTIGPER
LPAGPAVLESDAIIIVEGRADVLNLLKCGINNTVAVEGTKVPETVIDLSAKKNTTVFVDGDRGGDLILRELLQVADIDFV
AFSPRRRSVEDMSRKEIVKSLRNKVPASVLKSHIEKDEPISDLVFEIEAGEEEHSSVSQKEEGNNTTPDVPADLPEEPPK
SNIDEAIIPPITTSEQNLVKPENPHTIQEHTQYMKNTGRSRVLAEDAGVIGDYSLQELKAILPKLNDDVAGVIVDAAVDQ
KFIDQAFAKGLTYVAANAFEGIVRRPAGLRLIPF

Sequences:

>Translated_434_residues
MYSIDSIKYLIHIHIEAEGVVEKTDVVGAIFGQTEGLLGEELDLRDLQRSGRIGRIDVQIVSKHGKTAGECYIASSLDRA
ETAILAAALETIDRIGPCMAAIRIQNIEDLRAIKRRQIVERAKELLLESFDEVGISTYDILTEVREASRVEKITTIGPER
LPAGPAVLESDAIIIVEGRADVLNLLKCGINNTVAVEGTKVPETVIDLSAKKNTTVFVDGDRGGDLILRELLQVADIDFV
AFSPRRRSVEDMSRKEIVKSLRNKVPASVLKSHIEKDEPISDLVFEIEAGEEEHSSVSQKEEGNNTTPDVPADLPEEPPK
SNIDEAIIPPITTSEQNLVKPENPHTIQEHTQYMKNTGRSRVLAEDAGVIGDYSLQELKAILPKLNDDVAGVIVDAAVDQ
KFIDQAFAKGLTYVAANAFEGIVRRPAGLRLIPF
>Mature_434_residues
MYSIDSIKYLIHIHIEAEGVVEKTDVVGAIFGQTEGLLGEELDLRDLQRSGRIGRIDVQIVSKHGKTAGECYIASSLDRA
ETAILAAALETIDRIGPCMAAIRIQNIEDLRAIKRRQIVERAKELLLESFDEVGISTYDILTEVREASRVEKITTIGPER
LPAGPAVLESDAIIIVEGRADVLNLLKCGINNTVAVEGTKVPETVIDLSAKKNTTVFVDGDRGGDLILRELLQVADIDFV
AFSPRRRSVEDMSRKEIVKSLRNKVPASVLKSHIEKDEPISDLVFEIEAGEEEHSSVSQKEEGNNTTPDVPADLPEEPPK
SNIDEAIIPPITTSEQNLVKPENPHTIQEHTQYMKNTGRSRVLAEDAGVIGDYSLQELKAILPKLNDDVAGVIVDAAVDQ
KFIDQAFAKGLTYVAANAFEGIVRRPAGLRLIPF

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0095 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y361_METLZ (A2SQD1)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001029804.1
- ProteinModelPortal:   A2SQD1
- SMR:   A2SQD1
- STRING:   A2SQD1
- GeneID:   4794931
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_0361
- eggNOG:   arNOG04629
- HOGENOM:   HBG541216
- OMA:   FTHIREV
- ProtClustDB:   PRK04031
- BioCyc:   MLAB410358:MLAB_0361-MONOMER
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47579; Mature: 47579

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSIDSIKYLIHIHIEAEGVVEKTDVVGAIFGQTEGLLGEELDLRDLQRSGRIGRIDVQI
CCCCCCEEEEEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
VSKHGKTAGECYIASSLDRAETAILAAALETIDRIGPCMAAIRIQNIEDLRAIKRRQIVE
EECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RAKELLLESFDEVGISTYDILTEVREASRVEKITTIGPERLPAGPAVLESDAIIIVEGRA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEECCH
DVLNLLKCGINNTVAVEGTKVPETVIDLSAKKNTTVFVDGDRGGDLILRELLQVADIDFV
HHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEE
AFSPRRRSVEDMSRKEIVKSLRNKVPASVLKSHIEKDEPISDLVFEIEAGEEEHSSVSQK
EECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHEEEEECCCHHHHHHHHH
EEGNNTTPDVPADLPEEPPKSNIDEAIIPPITTSEQNLVKPENPHTIQEHTQYMKNTGRS
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
RVLAEDAGVIGDYSLQELKAILPKLNDDVAGVIVDAAVDQKFIDQAFAKGLTYVAANAFE
EEEHHCCCCCCCCCHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHH
GIVRRPAGLRLIPF
HHHCCCCCCEECCC
>Mature Secondary Structure
MYSIDSIKYLIHIHIEAEGVVEKTDVVGAIFGQTEGLLGEELDLRDLQRSGRIGRIDVQI
CCCCCCEEEEEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
VSKHGKTAGECYIASSLDRAETAILAAALETIDRIGPCMAAIRIQNIEDLRAIKRRQIVE
EECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RAKELLLESFDEVGISTYDILTEVREASRVEKITTIGPERLPAGPAVLESDAIIIVEGRA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEECCH
DVLNLLKCGINNTVAVEGTKVPETVIDLSAKKNTTVFVDGDRGGDLILRELLQVADIDFV
HHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEE
AFSPRRRSVEDMSRKEIVKSLRNKVPASVLKSHIEKDEPISDLVFEIEAGEEEHSSVSQK
EECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHEEEEECCCHHHHHHHHH
EEGNNTTPDVPADLPEEPPKSNIDEAIIPPITTSEQNLVKPENPHTIQEHTQYMKNTGRS
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
RVLAEDAGVIGDYSLQELKAILPKLNDDVAGVIVDAAVDQKFIDQAFAKGLTYVAANAFE
EEEHHCCCCCCCCCHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHH
GIVRRPAGLRLIPF
HHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA