Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485165

Identifier: 124485165

GI number: 124485165

Start: 319205

End: 319954

Strand: Reverse

Name: 124485165

Synonym: Mlab_0338

Alternate gene names: NA

Gene position: 319954-319205 (Counterclockwise)

Preceding gene: 124485170

Following gene: 124485164

Centisome position: 17.73

GC content: 53.07

Gene sequence:

>750_bases
ATGAGCAAAAACAGTATTATTGAAGGTCTGCTTGCAGATCTGCCGGAAAAACCAGTACCCGTCCGATCCGTCTGTATCGG
AGCGCACTGGACAGCCGTCTGCAGTACACACTGCGGCCTTGCTGCAACGATTATCGGCGAGGAGGTCCACGACCACACAA
TCGTTGTCCGCGATGCGGGACATCTTCATGAGAAAAGTGCTCAGGAGCTGGCCGGATACGCTCTCTCGAAAAATCCCCTG
GAAGCAGGAATCGGCGTTGCCGCCATCAACTCGCTTCTGGAAGTGAATGAACAAAATGCGGCGGAGATAAACGCGGCGGA
TCTGCTGATGGAAAAAGGCGCAGGAAAAACGGTAGCGCTTGTCGGGCATTTTCCGTTTATTCAAAAACTCCGGGAACGCG
TCGAAAACCTTCAGGTCCTTGAGATACACCCCGGGGAAGATGAGTATCCTAAAGAGGCAGCTGCTGAGATCATTCCTCGT
GCAGATGTCGTAGGGATCACCGGGAGTTCTCTGGTAAATCATACGATGGACGGCCTCCTGGACCTTTGTGATCCGAATGC
TCTGGTCATTGTTCTGGGTCCGACGACGCCGCTTTCTCCGGTCATGTTTGAGCATGGGGCGGATATTATCGCAGGATCCC
GTGTCATCGACGGGAAAAGTGTTCTCGCCGCTGTCGGACAGGGAGCGTCATTCAAACAGATCACCGGAGTGAAACTGCTG
GCCTTTACAAACCCCGAAAAACGCATATAA

Upstream 100 bases:

>100_bases
ATTATTTTACACATATGCGCACAAGTAATTTAAACTATCGTATCGTAATCATACTGCCCTCTGCAGAGAGAAAAACTCTG
CATGCAAAGGAACGGATCAC

Downstream 100 bases:

>100_bases
TCTAAAAAATAAAATGAAAGCAGATACTATGGATACAACCGCGAACAAAGATGAGGAGGAGATGGGTTCTACCGTATGCC
AGGCGGATTCATTCAGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSKNSIIEGLLADLPEKPVPVRSVCIGAHWTAVCSTHCGLAATIIGEEVHDHTIVVRDAGHLHEKSAQELAGYALSKNPL
EAGIGVAAINSLLEVNEQNAAEINAADLLMEKGAGKTVALVGHFPFIQKLRERVENLQVLEIHPGEDEYPKEAAAEIIPR
ADVVGITGSSLVNHTMDGLLDLCDPNALVIVLGPTTPLSPVMFEHGADIIAGSRVIDGKSVLAAVGQGASFKQITGVKLL
AFTNPEKRI

Sequences:

>Translated_249_residues
MSKNSIIEGLLADLPEKPVPVRSVCIGAHWTAVCSTHCGLAATIIGEEVHDHTIVVRDAGHLHEKSAQELAGYALSKNPL
EAGIGVAAINSLLEVNEQNAAEINAADLLMEKGAGKTVALVGHFPFIQKLRERVENLQVLEIHPGEDEYPKEAAAEIIPR
ADVVGITGSSLVNHTMDGLLDLCDPNALVIVLGPTTPLSPVMFEHGADIIAGSRVIDGKSVLAAVGQGASFKQITGVKLL
AFTNPEKRI
>Mature_248_residues
SKNSIIEGLLADLPEKPVPVRSVCIGAHWTAVCSTHCGLAATIIGEEVHDHTIVVRDAGHLHEKSAQELAGYALSKNPLE
AGIGVAAINSLLEVNEQNAAEINAADLLMEKGAGKTVALVGHFPFIQKLRERVENLQVLEIHPGEDEYPKEAAAEIIPRA
DVVGITGSSLVNHTMDGLLDLCDPNALVIVLGPTTPLSPVMFEHGADIIAGSRVIDGKSVLAAVGQGASFKQITGVKLLA
FTNPEKRI

Specific function: Unknown

COG id: COG2014

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26274; Mature: 26142

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNSIIEGLLADLPEKPVPVRSVCIGAHWTAVCSTHCGLAATIIGEEVHDHTIVVRDAG
CCCHHHHHHHHHHCCCCCCCHHHEEECCHHHHHHHHCCCEEEEHHHCCCCCCEEEEECCC
HLHEKSAQELAGYALSKNPLEAGIGVAAINSLLEVNEQNAAEINAADLLMEKGAGKTVAL
CHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEE
VGHFPFIQKLRERVENLQVLEIHPGEDEYPKEAAAEIIPRADVVGITGSSLVNHTMDGLL
EECCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHH
DLCDPNALVIVLGPTTPLSPVMFEHGADIIAGSRVIDGKSVLAAVGQGASFKQITGVKLL
HHCCCCEEEEEECCCCCCCHHHHHCCCCEEECCEEECCHHHHHHHCCCCCCEEECCEEEE
AFTNPEKRI
EECCCCCCC
>Mature Secondary Structure 
SKNSIIEGLLADLPEKPVPVRSVCIGAHWTAVCSTHCGLAATIIGEEVHDHTIVVRDAG
CCHHHHHHHHHHCCCCCCCHHHEEECCHHHHHHHHCCCEEEEHHHCCCCCCEEEEECCC
HLHEKSAQELAGYALSKNPLEAGIGVAAINSLLEVNEQNAAEINAADLLMEKGAGKTVAL
CHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEE
VGHFPFIQKLRERVENLQVLEIHPGEDEYPKEAAAEIIPRADVVGITGSSLVNHTMDGLL
EECCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHH
DLCDPNALVIVLGPTTPLSPVMFEHGADIIAGSRVIDGKSVLAAVGQGASFKQITGVKLL
HHCCCCEEEEEECCCCCCCHHHHHCCCCEEECCEEECCHHHHHHHCCCCCCEEECCEEEE
AFTNPEKRI
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA