Click here to switch to the map view.

The map label for this gene is vorB [H]

Identifier: 124484879

GI number: 124484879

Start: 51405

End: 52295

Strand: Reverse

Name: vorB [H]

Synonym: Mlab_0050

Alternate gene names: 124484879

Gene position: 52295-51405 (Counterclockwise)

Preceding gene: 124484880

Following gene: 124484878

Centisome position: 2.9

GC content: 54.21

Gene sequence:

>891_bases
ATGACGGAAATTCCCAAAGAAGAGATGCTTTTAAAGTGTCCATCCACCTGTGCTGGATGCGGCTCGTTACTTGCACTCCG
CTATATCCTCAAGGCTGCAGGCAAAGATACGGTCCTCGTGATCCCTGCCTGCTGCAACAGTGTGATCCAGGGTGTCTATC
CCTACATGCTTCACACGGTGCCCGTCTATAACATCGCATTTGCGGCCGCAGCGGCCTGTGCTTCCGGTATGAGCGAAGCT
CTCCGCGCAAAAGGTGAAAAAACCAACGTCATCGTCTATGCAGGAGACGGAGGCACAGCCGACATCGGTATCCAGGCACT
GTCCGGGGCCCTGGAACGCGGCGAGGACTTCCTCTATATCTGCTACGACAACGAAGCATACGGAAATACCGGAATGCAGA
GATCAGGCGCGACCCCGCTTGGAGCAATAACCACTACTACCCCGAACGGAAAAACCGTCAACAAGAAAGATCTTGACAGG
ATCGTCGAGGCCCATAACCTTCCCTACCAGGCAACGGCCTGCTCCTCGTACCCCGCCGACATCTACAACAAAGTGAAAAA
AGCCCTTTCGATCCCGGGACCGAAGTTCATCCACATCCTTGCACCCTGCCCGCCGGGCTGGAGGATCCCCTCGGAAAAGA
CCGTCGAGATCGGAAAGATGGCAGTTAAATCCGGCATCTGGGTCCTCTGGGAAAAAGAGTACGACAAATTCACGGTGAGT
GCCCCATCACGTGCCGCCATGAAACGGCCGGCACCCGTAAGTGACTACCTCAAAGCCCAGGGACGATTCAGAAAAGTCGA
TGAAAAAACAGCCGCAGTCATCCAGGCAAACGTCGACAAAAACCTGAAGAAAATTGCTCTCGAAGCCGCACAATCGGAGG
AAACAGAATGA

Upstream 100 bases:

>100_bases
TGAAGATCTTTTTTCCGGTATTCGCGACGGCGGCATGCTACTCATTAGCATCTCGATTCGCAAGCCTCATTATAAATCGT
GACAAATACATAAAGAACCC

Downstream 100 bases:

>100_bases
GCGAACTTGTAATGTCCACCGGTAACAAAGCCGTAGCTTCAGCCGTAAAAATGGCAAAGCCGCTCGTCGTTGCCGCATAT
CCCATCACCCCCCAGACCGA

Product: aminotransferase class-III

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTEIPKEEMLLKCPSTCAGCGSLLALRYILKAAGKDTVLVIPACCNSVIQGVYPYMLHTVPVYNIAFAAAAACASGMSEA
LRAKGEKTNVIVYAGDGGTADIGIQALSGALERGEDFLYICYDNEAYGNTGMQRSGATPLGAITTTTPNGKTVNKKDLDR
IVEAHNLPYQATACSSYPADIYNKVKKALSIPGPKFIHILAPCPPGWRIPSEKTVEIGKMAVKSGIWVLWEKEYDKFTVS
APSRAAMKRPAPVSDYLKAQGRFRKVDEKTAAVIQANVDKNLKKIALEAAQSEETE

Sequences:

>Translated_296_residues
MTEIPKEEMLLKCPSTCAGCGSLLALRYILKAAGKDTVLVIPACCNSVIQGVYPYMLHTVPVYNIAFAAAAACASGMSEA
LRAKGEKTNVIVYAGDGGTADIGIQALSGALERGEDFLYICYDNEAYGNTGMQRSGATPLGAITTTTPNGKTVNKKDLDR
IVEAHNLPYQATACSSYPADIYNKVKKALSIPGPKFIHILAPCPPGWRIPSEKTVEIGKMAVKSGIWVLWEKEYDKFTVS
APSRAAMKRPAPVSDYLKAQGRFRKVDEKTAAVIQANVDKNLKKIALEAAQSEETE
>Mature_295_residues
TEIPKEEMLLKCPSTCAGCGSLLALRYILKAAGKDTVLVIPACCNSVIQGVYPYMLHTVPVYNIAFAAAAACASGMSEAL
RAKGEKTNVIVYAGDGGTADIGIQALSGALERGEDFLYICYDNEAYGNTGMQRSGATPLGAITTTTPNGKTVNKKDLDRI
VEAHNLPYQATACSSYPADIYNKVKKALSIPGPKFIHILAPCPPGWRIPSEKTVEIGKMAVKSGIWVLWEKEYDKFTVSA
PSRAAMKRPAPVSDYLKAQGRFRKVDEKTAAVIQANVDKNLKKIALEAAQSEETE

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787642, Length=221, Percent_Identity=27.6018099547511, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.7 [H]

Molecular weight: Translated: 31827; Mature: 31696

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIPKEEMLLKCPSTCAGCGSLLALRYILKAAGKDTVLVIPACCNSVIQGVYPYMLHTV
CCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
PVYNIAFAAAAACASGMSEALRAKGEKTNVIVYAGDGGTADIGIQALSGALERGEDFLYI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
CYDNEAYGNTGMQRSGATPLGAITTTTPNGKTVNKKDLDRIVEAHNLPYQATACSSYPAD
EECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHH
IYNKVKKALSIPGPKFIHILAPCPPGWRIPSEKTVEIGKMAVKSGIWVLWEKEYDKFTVS
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEC
APSRAAMKRPAPVSDYLKAQGRFRKVDEKTAAVIQANVDKNLKKIALEAAQSEETE
CCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TEIPKEEMLLKCPSTCAGCGSLLALRYILKAAGKDTVLVIPACCNSVIQGVYPYMLHTV
CCCCCHHHHEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
PVYNIAFAAAAACASGMSEALRAKGEKTNVIVYAGDGGTADIGIQALSGALERGEDFLYI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
CYDNEAYGNTGMQRSGATPLGAITTTTPNGKTVNKKDLDRIVEAHNLPYQATACSSYPAD
EECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHH
IYNKVKKALSIPGPKFIHILAPCPPGWRIPSEKTVEIGKMAVKSGIWVLWEKEYDKFTVS
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEC
APSRAAMKRPAPVSDYLKAQGRFRKVDEKTAAVIQANVDKNLKKIALEAAQSEETE
CCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]