| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124484867
Identifier: 124484867
GI number: 124484867
Start: 41119
End: 41403
Strand: Reverse
Name: 124484867
Synonym: Mlab_0038
Alternate gene names: NA
Gene position: 41403-41119 (Counterclockwise)
Preceding gene: 124484868
Following gene: 124484863
Centisome position: 2.29
GC content: 48.42
Gene sequence:
>285_bases ATGATAAAACATCTCGTTCTCTTCAAACTCAAAGACCCGGCATGTGCCGAAGAAACACGCAATATCCTCCTTTCGATGAA AGGCGTTGTTGAACAGATCAGGGAAATCGAGGTCGGTATCGATTATGCCCACACCGAGCGGTCCTTCGATGTCGCGCTTT CGGTCATCGTGGATGATGAAGATGCCCTTCGCGGTTATGCCGAGCATCCCTATCACGCAGGCCCGGTCAAAAAATATGTG AGAAGCGTGAGCGAAAAAAGTGTGACTGCAGATTATTACATCTGA
Upstream 100 bases:
>100_bases GCCGAACGCCTGGTCATGACCATGCTCGATCTCCAGAATATCAGGGAAGCCGTTCTCTTCCCGCGGGACCGACACAGAGT CAGTCCATAACCCTTTTTTT
Downstream 100 bases:
>100_bases TTATTCAGATCCCATCCTCTTTTCCGAAAAGGAACACCTCTTCGATTTGACACTCGAATACGAGGGAAAGTTTGTGCGCG AGAAGGACCGATGGATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MIKHLVLFKLKDPACAEETRNILLSMKGVVEQIREIEVGIDYAHTERSFDVALSVIVDDEDALRGYAEHPYHAGPVKKYV RSVSEKSVTADYYI
Sequences:
>Translated_94_residues MIKHLVLFKLKDPACAEETRNILLSMKGVVEQIREIEVGIDYAHTERSFDVALSVIVDDEDALRGYAEHPYHAGPVKKYV RSVSEKSVTADYYI >Mature_94_residues MIKHLVLFKLKDPACAEETRNILLSMKGVVEQIREIEVGIDYAHTERSFDVALSVIVDDEDALRGYAEHPYHAGPVKKYV RSVSEKSVTADYYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10682; Mature: 10682
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKHLVLFKLKDPACAEETRNILLSMKGVVEQIREIEVGIDYAHTERSFDVALSVIVDDE CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCH DALRGYAEHPYHAGPVKKYVRSVSEKSVTADYYI HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIKHLVLFKLKDPACAEETRNILLSMKGVVEQIREIEVGIDYAHTERSFDVALSVIVDDE CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCH DALRGYAEHPYHAGPVKKYVRSVSEKSVTADYYI HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA