| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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Identifier: 124267677
GI number:
Start: 2650948
End: 2653188
Strand: Direct
Name: Not Available
Synonym: Mpe_A2491
Alternate gene names: NA
Gene position: NA
Preceding gene: 124267676
Following gene: 124267678
Centisome position: NA
GC content: NA
Gene sequence:
>2241_bases ATGACCGCGAAGAAGAGCGCTCCCGCCCCTGCGAGCAAGCCATCGAAGACCGCCGCGCCGGCGCCGGCCGCCAAGGCCGC AGCCAAGTCGGCCGGCAAGGCCGAGATCGACCCGAAGAAGGCCAAGGCGGCTGCCGCCCCGGCCAAAGCCGCGGGGAAGA CGGCCAAAGTCGCCGTGCCCGAGGCCCCCAAGGGCAAGCCGGGTCGCAAGCCGGCCGCCAAGCAAGCGCTGCCGGTGCTC GACGAGGACCTGGGCGACATCGAGGCCGACCTCGAAGGCGAAGCCAGCGCCGAGGACACCGGTGGCGACAAGCCCAAGGC CAAGCCGCTGCGCATGAAGGTCTCGCGCGCCAAGGAGCGCGCGCTGATGCGCGAATTCGGTCTCGATGAGACGGCGCTGA CCGAGGACGAGGTGGCCAAGCGCCGCCAGGAGCTCAAGACGCTCATCAAGATGGGCAAGACCCGGGGTTTCCTGACACAC CAGGAAATCAACGACCACCTGCCCGAAAAGCTGATCGAGGCCGAGATCCTCGAGGCCATCGTGTCGATGCTCAACGACAT GGGCATCGCCGTCTACGAGCAAGCACCCGACGCGGCCACGCTGCTGATCGCCGGCGGCTCGACCGCCACCTCGACCGATG AGGAGGCCGAGGAAGAGGCCGAGGCGGCGCTGTCGACCGTCGACTCCGAGTTCGGCCGCACCACCGACCCGGTGCGCATG TACATGCGCGAGATGGGCACGGTCGAGCTGCTGACGCGCGAGGGTGAGATCGAGATCGCCAAACGCATCGAGGGCGGGCT GCAGGCGATGATGCTGGCGATCAGCGAATCGCCCACCACGATCGCCGAGATCCTGGTGCTGGCCGACAAGATCCGCGTCG GCGAGATGCAGATCTCGGAGGCGGTCGACGGCTTCGTGTCGAACGAGGAGGCCGACGACTACGTCGCCGAAGAGGACTTC GACGAGTTCGACGAGGAAGACGACGACGACGGCAACGGCGGCTCGAAGGCGCTGACCAAGAAGCTCGAGGAACTGAAGAC GCAGGCGCTGGTGCGTTTCGACGAACTGCGCACGCACTTCGACCGCATGCGCAAGGCCTACGAGAAGGAAGGCTACAAGT CGCCGGCCTACAACCGCGCGCAGATGGGCGTGAGTTCCGAGATCATGAGCCTGCGCTTCACGGTCAAGACCATCGAGCGG CTGTGCCAGATCCTGCGCTCGCAGGTCGACGACATCCGCCGCTACGAGCGCGAACTGCGCAAGATCGTGGTCGACAAGTG CGGCATGCCGCAGGACCACTTCATCAAGACCTTCCCGCCAAACTCGCTGAACCTCAAGTGGGCCGAGAAGGAGATCGCAG CCAACAAGTCGTACAGCGCGGTGATGGCGCGCAACCTGCCGCCGATCCAGGACCTGCAGCAGAAGCTGATCGACCTGCAG AGCCGTGCGGTGGTGCCGATCGACGACCTGAAGCTCATCAACAAGAAGATGAACCAGGGCGAGAAGGCCTCGCGAGACGC GAAGAAGGAGATGATCGAGGCCAACCTGCGCCTGGTGATCTCGATCGCGAAGAAGTACACCAACCGCGGCCTGCAGTTCC TCGATCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAATACCGCCGCGGCTACAAGTTCTCG ACCTACGCGACGTGGTGGATCCGCCAGGCCATCACGCGCTCGATCGCCGACCAGGCGCGCACCATTCGCATTCCGGTGCA CATGATCGAGACGATCAACAAGATGAACCGCCTGTCGCGCCAGCACCTGCAGGAGTTCGGCTTCGAGCCGGACGCCCCGA CGCTGGCCGAAAAGATGGAGATGCCCGAGGACAAGATCCGCAAGATCATGAAGATCGCCAAGGAGCCGATCTCCATGGAG ACGCCGATCGGCGACGACGACGATTCGCACCTGGGCGACTTCATCGAGGACACCAACAACACCGCGCCGATCGAGGCGGC GATGCAGGCAGGTCTGCGCGACGTGGTGAAGGACATCCTCGACTCGCTGACGCCGCGCGAGGCCAAGGTGCTGCGCATGC GCTTCGGCATCGAGATGTCGACCGACCACACGCTGGAGGAAGTGGGCAAGCAGTTCGACGTGACGCGCGAGCGCATCCGC CAGATCGAAGCCAAGGCGATCCGCAAGCTCAAGCACCCGAGCCGTTCCGACAAGCTGAGGACCTACCTGGACAATCTCTG A
Upstream 100 bases:
>100_bases GACCTGTGTTTGCATGGTGCCTTCCGCGGCCATGCAGTGCCGGGCCGGATTGCGGCGCATGGCTTCAGGCACCCGAGACA CCCATCCTCCAAGGAATCGC
Downstream 100 bases:
>100_bases GCGCGGCCCTGTCCGCCCCCAAAGCCCGGCCTTGTGCCGGGCTTTTTTCATGGCGGACTTGTTGGGGATGGAGGCGTCTT GCCACGCGGGATAAACTTTG
Product: putative RNA polymerase sigma(sigma-70) factor transcription regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>746_residues MTAKKSAPAPASKPSKTAAPAPAAKAAAKSAGKAEIDPKKAKAAAAPAKAAGKTAKVAVPEAPKGKPGRKPAAKQALPVL DEDLGDIEADLEGEASAEDTGGDKPKAKPLRMKVSRAKERALMREFGLDETALTEDEVAKRRQELKTLIKMGKTRGFLTH QEINDHLPEKLIEAEILEAIVSMLNDMGIAVYEQAPDAATLLIAGGSTATSTDEEAEEEAEAALSTVDSEFGRTTDPVRM YMREMGTVELLTREGEIEIAKRIEGGLQAMMLAISESPTTIAEILVLADKIRVGEMQISEAVDGFVSNEEADDYVAEEDF DEFDEEDDDDGNGGSKALTKKLEELKTQALVRFDELRTHFDRMRKAYEKEGYKSPAYNRAQMGVSSEIMSLRFTVKTIER LCQILRSQVDDIRRYERELRKIVVDKCGMPQDHFIKTFPPNSLNLKWAEKEIAANKSYSAVMARNLPPIQDLQQKLIDLQ SRAVVPIDDLKLINKKMNQGEKASRDAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFS TYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRLSRQHLQEFGFEPDAPTLAEKMEMPEDKIRKIMKIAKEPISME TPIGDDDDSHLGDFIEDTNNTAPIEAAMQAGLRDVVKDILDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIR QIEAKAIRKLKHPSRSDKLRTYLDNL
Sequences:
NA
Specific function: NA
COG id: COG0568
COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA